Oreochromis niloticus (Nile tilapia): 100704609
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Entry
100704609 CDS
T06104
Symbol
msi1
Name
(RefSeq) RNA-binding protein Musashi homolog 1 isoform X2
KO
K14411
RNA-binding protein Musashi
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100704609 (msi1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
onl03019
]
100704609 (msi1)
Messenger RNA biogenesis [BR:
onl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
100704609 (msi1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
RRM_PARP14_1
PHM7_cyt
NID
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
100704609
NCBI-ProteinID:
XP_003445623
Ensembl:
ENSONIG00000011182
LinkDB
All DBs
Position
LG12:complement(8570315..8591206)
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AA seq
329 aa
AA seq
DB search
METEGSQSSLSTADSPHDPCKMFIGGLSWQTTQEGLKEYFCKYGEVKECMVMRDPVTKRS
RGFGFVTFVDQAGVDKVLAQTRHELDSKTIDPKVAFPRRAQPKLVTRTKKIFVGGLSVNT
TIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVE
CKKAQPKEVMSPTGSARGRSRVMPYGMDAFMLGIGMLGYPGFQTATYTSRSYAGITPGYT
YQFPAIPLTAYGPMAAAAAAAVVRGSTPSRSAGFLGTSSPGPMADLYGTASQESAVSSYL
SAASPAPSTGFSHSLGGPLIATAFTNGYH
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggagacggaagggagccagagcagcctgtccaccgcggactccccgcatgacccctgc
aaaatgttcataggtggactcagctggcaaacaacacaagagggtctgaaggagtacttc
tgcaagtacggcgaggtgaaggagtgtatggtgatgcgagatccagttactaagcgctcg
agagggttcggattcgtcacctttgtcgatcaggctggcgtggataaagttttggctcaa
accaggcacgagttggactccaaaacaatcgatccaaaggtcgcatttcctcgcagagcc
cagcccaagttggtcactcgaaccaagaaaatctttgtgggaggcctgtcggtgaacacg
actatcgaggacgtcaagcagtacttcgaccagtttgggaaggtcgacgatgctatgctc
atgttcgacaagaccaccaacagacacagaggatttggctttgtaacatttgagaatgaa
gacgtggtggagaaagtgtgcgagatccacttccacgagatcaacaacaaaatggtggag
tgcaagaaagcgcagcccaaggaggtgatgtcccccaccggctcggccagggggcgctct
cgggtgatgccgtatgggatggacgccttcatgctgggcatcggtatgctgggttatcca
ggctttcagactgccacctacaccagtcggagctatgctggcatcactcctggatacacc
taccagtttcctgccattcctctcacagcatatggaccaatggcggcggcggcagcagcg
gcagtagtcagaggctccaccccgtctcgttctgctggatttttaggtacaagcagccca
ggtccgatggcagacctttatggaacagccagtcaggaatcggccgtcagcagttacctc
agcgctgccagccctgcaccaagcactggattcagccatagtctggggggccctttgatt
gccacagccttcactaacggctatcactga
DBGET
integrated database retrieval system
