Oreochromis niloticus (Nile tilapia): 100704898
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Entry
100704898 CDS
T06104
Name
(RefSeq) nuclear receptor ROR-beta
KO
K08533
RAR-related orphan receptor beta
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
onl03000
]
100704898
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
onl03310
]
100704898
Transcription factors [BR:
onl03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
100704898
Nuclear receptors [BR:
onl03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
100704898
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
100704898
NCBI-ProteinID:
XP_005478800
Ensembl:
ENSONIG00000004686
UniProt:
I3JAL2
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Position
LG23:35203578..35216220
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AA seq
474 aa
AA seq
DB search
MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAMYSCSRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQSQECGGIGAREEKSDTAD
HGRTYRRGSSATLSDLDDITTLPEGLLFDLPLTPEDGGGDYYNLDMMGGSAGSGSSSQSS
PEQTSLDFGDGNHSIKHEYQLLRDSGLFSHAIFNPLPDGCSLLEIERVAQNVVKSHIETN
QYTSEELKRMAWTLYSPEETRSYQTKSAEAMWQQCAVHITNAIQYVVEFAKRISGFMDLC
QNDQIILLKAGCMDVLLIRMCRAYNPINNTVFFDGKFSTPQLFKALGCDDLVNAVFDLAK
SLSRIQMSDEEIALFSAAVLLSPDRPWLTDVQKIQKLQEKVYVALQRCLQREGASEEKLA
KMVSKLPTMRSICNLHIDKLEFFRLVHPETAYMFPPLYREVFGSEITFPDSTEG
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgagagctcaaatagaagtgattccctgtaaaatctgtggcgacaaatcatcagggatt
cactatggtgtcatcacctgtgaaggctgcaagggtttctttcggcgcagccagcagaac
aatgccatgtactcgtgctcgcgacagaggaactgcctaattgaccggaccaaccgtaac
cgctgtcagcactgcaggctgcagaagtgtctcgctctcggcatgagccgcgatgctgta
aagtttggtcgaatgtccaaaaagcagcgtgacagcctgtacgcagaggtccagaagcac
cagcagtcccaggagtgcggagggatcggtgcccgcgaggagaagagcgacacggctgac
catggccgtacctacaggagaggctccagcgccactctcagcgatctggacgacatcaca
acgctgccggaggggctgctttttgacctgccgctgactccggaggatggcggaggagac
tactataacctggacatgatgggaggaagtgcaggcagcggctcctcctcgcagagctcc
ccagaacagaccagcttggactttggtgacggaaaccacagcatcaagcatgagtaccag
ctgctgcgtgactctggactcttctcacacgccatcttcaacccgctgcctgacggctgc
tccctgctcgagatagagcgcgttgcccagaatgtggtcaagtcccacatcgagacgaac
cagtacacctcggaggagctcaagagaatggcatggaccttgtacagcccagaagagacc
cgctcataccagaccaagtcagctgaggcgatgtggcaacagtgcgccgttcacatcacc
aatgcaatccagtatgtggtggagtttgctaagcgcatctctggcttcatggacctctgt
cagaatgatcagattatcctcctcaaagcaggctgcatggacgtcctgctcatccgcatg
tgtcgggcctacaaccccatcaataatacagtgttctttgatggaaaattctccactcct
cagcttttcaaagctcttggctgtgacgaccttgtgaatgcggtgtttgacttggctaaa
agcctgagccgtatacagatgtctgacgaggagattgctcttttcagtgctgctgtgctg
ctctcgccagaccgaccctggctgacggatgttcagaagatccagaagttgcaggagaag
gtttacgtggctctgcagcgctgcttacagcgagagggcgcatcagaggagaaactggct
aagatggtgtctaagcttcccacgatgaggtccatttgcaaccttcacattgacaaactg
gagtttttccgtctggttcacccagagacggcgtatatgttccctcctctgtatagggag
gtttttggcagtgaaatcaccttcccagactccacagagggctag
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