Oreochromis niloticus (Nile tilapia): 100705089
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Entry
100705089 CDS
T06104
Symbol
tmc6
Name
(RefSeq) transmembrane channel-like protein 6
KO
K21988
transmembrane channel-like protein
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
onl02000
]
100705089 (tmc6)
03037 Cilium and associated proteins [BR:
onl03037
]
100705089 (tmc6)
Transporters [BR:
onl02000
]
Other transporters
Pores ion channels [TC:
1
]
100705089 (tmc6)
Cilium and associated proteins [BR:
onl03037
]
Other cilia and associated proteins
Stereociliary proteins
100705089 (tmc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
KxYKxGKxW_sig
Motif
Other DBs
NCBI-GeneID:
100705089
NCBI-ProteinID:
XP_005458567
Ensembl:
ENSONIG00000018785
UniProt:
A0A669EL09
LinkDB
All DBs
Position
LG6:complement(32728513..32748204)
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AA seq
828 aa
AA seq
DB search
MARNVNFDLSHPLMEAGLESPADEEGVHDSFQQLIAEHADNGAASSALELQQLQSDLVEE
SQDNIPLCGPEHEHRRQGASDLECDGGEREMDQIQGEGWSSDTLKILSSMPSRTIGRNRG
AIISQYCNKTLKLRRRRQTRPSIRDFSPSSRPSIRSYGMEGDTIDAEVSKRERLVNNLQN
LPVSDRVRMLRGMPLSVAEKKEIRNLVMQKEKRILSNKRLSCYSQLKYYIIIAARKSWYS
WLSFLHSLQPWQTLLKRVSGRFGTGVLSYFLFLKTLVFFNVFLFLVTGAFLVLPQAVHPP
DEATETRSFSGLELLTGAGSFSHTVMYYGYYTNYTLPRSSRGEGRGQNASALSSDSQQFS
YNMPLAYFFTIGMAFFITCIILVYSMSKTFGRSFRINKSNSILTMKTFSSWDFKVIKKKS
VQIMSENICTQLKELLAELTQKNTKSTFCKRFCRQMVHGVAWTICIASTTGCMAGVYYFS
EFIHKDLQQNYRKFEVYPLMKEARLLSLPTVVSLINLLLPALFNVVAWMEIYESPSVFAY
VAIGRNLMLKTSMLGVLCFHWLGRVAPEYKSIGLTCWESFVGEELYRFLLMDFIFTLLDT
LFGELLWRLFSEKVLKKKRKPVFDIARNVLDLIYGQTLAWLGVLFSPLLPAVQILKLFLV
FYIKMSSVMMNCQAPRKPYRASQMTTIFITLLCIPSLLGASVCVTYTMWSITPSTSCGPF
RGLSTMFKAGKHWMKILEKDNPKLSVLSKAHTYFVENPFFLFVGAGIFLIVIYFHSQVVD
GQRKIISLLQDQIQNEGEDKKFLINQLQSVHKQKQDAGKRLKSQDSTC
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atggcccgaaatgttaactttgacctgagccacccgcttatggaagctggactggagagc
ccggcagacgaggaaggtgttcacgactcatttcagcagctaatagcagaacacgctgac
aatggagcagcatctagtgccttggagctgcagcagctgcagagtgatttggttgaggag
agtcaagacaatataccattgtgcggccctgaacatgagcataggaggcagggggcaagt
gatttggaatgtgatggcggtgaaagagaaatggaccaaatccaaggtgaaggctggtcc
tcggacaccttgaaaatcctgtcctccatgcccagtcgcaccattggccgcaacagggga
gccatcatctctcagtactgcaacaaaaccttgaagcttaggagacgccggcagaccaga
ccatccatccgggacttctctccctcctctagaccgtccatacgaagctatggcatggag
ggagacactatagatgcagaagtgagtaagagggaacgtctggtgaacaacctgcagaac
ctgcctgtgagcgaccgggtgaggatgcttcgaggaatgcctctgagtgtcgctgagaag
aaagaaatcaggaatttagtaatgcagaaggaaaaacggatactttccaacaagaggctt
tcctgttacagtcaactcaaatactacatcatcattgctgcaagaaagagctggtacagc
tggttgtccttcctgcactctctccagccgtggcaaacgctgctcaagagagtgagcggg
cgtttcgggactggagtcctctcatactttctctttctcaagaccctagtctttttcaat
gtcttcctgttcctggttacgggtgcgttcctggtgctgcctcaggctgtgcatcctcca
gacgaggctacagagacaaggtcattctctggactggagctcctcactggagcgggctct
ttctcacataccgttatgtactatggatactacactaactacacactgcctaggagctcc
aggggtgaagggagaggacaaaatgcctccgcattgtcaagtgactcacagcagttctcc
tacaacatgcctctcgcatactttttcaccatcggaatggcattcttcatcacatgcatc
atccttgtatacagcatgtcgaaaacattcggtcggagcttcagaatcaacaaatctaat
agtatcttgactatgaagaccttcagctcctgggattttaaagtcatcaagaaaaagtct
gttcagatcatgtctgaaaatatctgcacacagctcaaggagctgctggcagagctgact
caaaagaacaccaagagcactttctgcaagaggttctgtaggcagatggttcatggagtg
gcatggacaatctgcatagcaagcaccactggctgtatggctggcgtttactacttctct
gagtttatccacaaggacctgcagcaaaactatcgtaaatttgaagtgtaccctttgatg
aaagaggccagattgttgtctctgcctacggtggtttctctcattaacctgctgttacct
gccctgttcaacgtcgtcgcctggatggagatctacgagtcaccttctgttttcgcatat
gtcgccattggccggaatttgatgttgaagacgagcatgcttggagttctctgcttccac
tggctgggtcgggtggctcctgaatacaaaagcattggcctgacgtgctgggagagtttt
gtgggtgaggagctttatcgcttcctgctcatggacttcatcttcactctactggacacg
ctgtttggcgagttactttggaggttgttttctgaaaaggtgctgaaaaagaagaggaaa
ccagtgtttgatatcgccaggaatgttctggatctcatctatggacagacgttagcctgg
ttgggagttctcttcagtccactcctgcccgcggtgcagattctcaaactatttctggtc
ttctacataaagatgagcagtgtgatgatgaactgtcaggcccccaggaagccatacaga
gccagccagatgacaaccatcttcatcactctcctttgcatcccctccctcctcggcgcc
tccgtgtgtgtcacatataccatgtggagcatcacaccgtctacttcgtgtggtccgttt
cgagggcttagcacaatgtttaaggcgggaaaacactggatgaaaatactggaaaaagat
aatcccaaactgtctgtgctgtccaaggctcacacatattttgtggaaaacccctttttc
ctgtttgtgggagcaggcatctttctgatagtgatctacttccacagtcaggtggtggac
ggtcaaaggaagatcatcagtttactccaggatcagatacaaaatgaaggagaagataaa
aagttcttgatcaatcagctgcagtctgtccacaaacagaaacaagatgctggaaaacgt
cttaaaagccaagactctacatgttga
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