Oreochromis niloticus (Nile tilapia): 100705197
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Entry
100705197 CDS
T06104
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H isoform X1
KO
K04856
voltage-dependent calcium channel T type alpha-1I
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04010
MAPK signaling pathway
onl04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
onl04040
]
100705197
Ion channels [BR:
onl04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
100705197
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
100705197
NCBI-ProteinID:
XP_005448170
Ensembl:
ENSONIG00000019794
LinkDB
All DBs
Position
LG8:complement(21195573..21215253)
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AA seq
1354 aa
AA seq
DB search
MHEIHDRHRGVVVEEQLPFPEVVPVCFGLKQTSRPRKWFLKIVSGPWLDYLSILVVLLSC
VNDGMYQPCVEAKEESFTREILGSLVFLYFIMETLIKTIALGFIGHKGSYLSSHWNKFDL
FIIFAELMDYTFGFFNLHVEASHAIKPMRLISRVPSMRILVTILLETAPMLGNVLILYAF
VIHIFGVIGVQMWAGKLRNRCFLGEDILTKYNVSLSPYFVPIFGGQSSFICSADDKGGGR
FCSDVPPYQEDGKICTLAADEPIQAGQCVNWNMYYNVCRAGDHNPDLGAINFDNIVYAWI
TIFQYVCLSVSPYSQVVTLEGWTNIMYYVMDSYSFWSFVFFIFVTIMGSFIIMNVCAVII
ATQFSENFARVTTEQHAGPLSFKNLFRKFVSFLKMMTNRVHPTKSSTHVKPTLHQVWIPF
KEKFNILINTKLFNRIIVIAIFITIVTMAIEHYNQPQELTRVLNVSNIIITIIFVVEMII
KLIALSWMYFADLDNIFDFVVVLISLWELGSQADGKLSVVRAFRVLRFVRLFHFLPYLKR
QLLVLKRTIGEASTLCWLMLFVIFIFSIVGMHLFGCKFHFRSIDDETVDDRKNFDSLLWS
MVTVFQILTQDDWNVVLYNAVAATSPWAAIYFIAIIVFGKNVLLNVLVGIVVDSFQARPS
ENIHQDCPRCPSLTCEAESSLEESPRTITGEYSVPATEPSRSNGSTSASEIPSPQTKNNS
FTRFLNRIQKVLLWCQQHKDWSLYMLSPQNRLRRFCQRLISHKAFDHVILFFILLNCVTI
AMERPSINPKSMERLILNASCCVFTAVFLIEMVIKVIALGLVIGKGSYCRSYWNLMDGFL
VILSLTNFIITLVTSDKKNILSILKVFRLLRTLRTLRMIKQTPKLKLAVKALVASAKPIG
NIVLICCVLFFFFGILGVQLFKGKFFYCEGENTSNITNKAECLSANYTWVRKEYNFDNLP
QALIALFVMYSKDGWMNIMYDGLDAVGVDQQPVKNYNEWMLIYFISFMVMSFFLLDMFIG
VMVETFHVCQQQQKQSLQRGGNSRDKRKGREENYFRHYSLVRRRIYDLTTSRFLELFMTV
IIFINVVLMALEHYNQPLYVEQMIEYSFYVFTVLLVLEIMLKVVAFGVLRFIKNSWNVLD
IAIVLVSFIFIVFTVMNMEDTLPINPSILKITRVLRLAQVLKAKKIRVLLRTITKTLSQV
GNLCLLFMFFFFIYAALGVELFGNLECTLDYPCEGINQYANFKNFGMALLTLYKVCTGDN
WSGILKDTLRPCRPSDKACPSYLWWASPICFATFVVMVHFVLANLVVAAVMQALEDSKEK
RPKTESSDIMQQPQESPGEPVISSSAGTTEGVQL
NT seq
4065 nt
NT seq
+upstream
nt +downstream
nt
atgcatgaaatccatgatagacatagaggcgtcgttgtagaggagcagcttcccttccca
gaggtagtgcctgtgtgcttcggactaaagcagacgagtagaccccgcaaatggttcctc
aaaatagtctctggcccatggttggattatttgtccatactggtggtcctgctcagctgc
gtgaatgacggcatgtaccagccttgtgtagaggcgaaagaggagagcttcacccgagag
attttgggttctctcgtctttctttacttcatcatggaaacgctcattaagacaatagcc
ctgggattcatcggccataaaggaagctacctgagcagccactggaacaagtttgacctt
ttcatcatctttgcagagctaatggattatacgtttggattctttaatctccacgtagaa
gcgtctcatgccatcaagccaatgagactaatcagccgagtaccaagtatgcggatattg
gtgacaatactccttgaaacggcccccatgcttggtaatgttctcatcctctacgcgttt
gtcatccacatcttcggagtcattggagttcagatgtgggcggggaagttgcgcaaccgc
tgcttcctgggagaggacatcctgacaaagtataacgtgtccctgagtccatactttgtg
cccatctttggtggacaatcctcgttcatctgttcagctgacgacaagggtggaggacgc
ttttgcagtgatgtgccgccttaccaggaggatgggaaaatctgcacactggcagcagat
gagcccatccaagccggccaatgtgtaaactggaacatgtactacaatgtatgccgtgct
ggggaccacaaccctgacttgggagctattaactttgataacatcgtctatgcctggata
accattttccagtatgtatgtctctctgtgtctccctactcccaggttgtgacacttgaa
ggatggaccaatatcatgtattatgttatggactcttattccttctggagttttgtgttt
ttcatatttgtcactattatgggctcctttatcataatgaatgtgtgtgcagtcatcatt
gcaacccagttctcagagaacttcgcaagagtcacaacagagcagcatgctggtcctctg
tcttttaaaaatctcttcaggaagttcgtttccttcctgaagatgatgaccaacagggtg
catcccaccaagagctcaacacatgtcaaacccacactgcatcaggtctggatccctttt
aaagaaaagtttaacattcttatcaacactaaactctttaaccgaatcatcgttattgct
attttcatcactattgtcaccatggcgatagagcactacaaccagcctcaggagttgaca
cgagtattaaatgtcagtaacataattattaccattatatttgtggtggagatgataata
aagctgatcgccctctcgtggatgtactttgcggaccttgacaacatcttcgactttgtg
gtcgttctcatcagtttatgggaattaggctcccaagctgatggcaagctgtcagttgtg
cgagcatttcgcgtgctgcgcttcgtgaggctgtttcacttcctcccgtacctgaagagg
caactactggtcctgaagaggacgattggagaggcatccactctgtgctggctaatgctg
ttcgtcattttcatttttagtattgtgggcatgcacctctttggatgcaaatttcacttc
aggtcaatagatgatgaaaccgttgatgatcgaaaaaactttgacagcctgctgtggtcc
atggtcactgtgttccagattctgactcaagacgactggaacgtggtgctttataatgcc
gtggctgccacctccccgtgggcagctatctactttattgccatcattgtgtttggaaaa
aatgttcttcttaatgtactggtgggcatagtggttgacagcttccaggccaggcccagt
gaaaacattcatcaagactgccctcgctgtcccagcttgacatgtgaggcagaaagctcc
cttgaggagagccccagaacaatcacaggagaatattctgttcctgccactgagcccagc
agatccaatgggagtacctcagcctctgagattccctccccacagacaaaaaacaacagt
ttcactagatttttgaataggattcagaaagtgctgctgtggtgccaacagcataaagac
tggtcattgtacatgctctctccacagaacaggttgcgtagattttgccagcgtttgatc
tctcacaaggcgtttgaccatgtgattctcttcttcattctgctgaactgtgtcaccatt
gctatggagaggcctagcataaacccaaaaagcatggaacgcttgatcctgaatgcatcc
tgttgtgtttttactgccgtcttcctgatcgagatggttattaaggttatagctcttggc
ttggtgatcgggaagggcagctactgccggtcatactggaatctcatggacggctttttg
gtgattctgtccttaaccaactttattatcactttggtcacttctgacaaaaagaacatt
ctcagcatcctcaaagtttttcggctgctaagaacacttcgcacgctgaggatgatcaag
caaaccccaaaactgaagctggctgtcaaagctcttgttgcctctgctaaaccaattggg
aacattgtcctgatttgctgtgtcctcttctttttctttgggatccttggggttcagctg
ttcaaaggaaagttcttctactgtgagggtgaaaacacttcaaacatcaccaataaggcc
gaatgtctctctgctaattatacgtgggttcggaaggagtacaactttgacaacctgcct
caggctctgatagccttgtttgtgatgtactctaaggacggctggatgaacatcatgtat
gatggactggatgctgtgggagtagatcaacagcctgtgaagaactataacgaatggatg
ctcatttatttcatctccttcatggtaatgagctttttcctcctcgacatgtttatcggc
gtcatggtggagaccttccatgtgtgccagcagcagcaaaaacagtcgctgcagagagga
ggaaactcacgggataaacgtaaaggcagagaggagaattatttcaggcactactccctc
gtgcgtcgccgtatctatgacctgactaccagcagattcctcgagttattcatgacggtc
atcatcttcattaatgtcgtgttaatggctttggaacactataatcagcctttgtatgta
gagcagatgatagagtactccttctatgtgttcactgtcctcctggtcctggaaatcatg
ctaaaggttgtggcatttggcgtactgaggttcataaaaaacagttggaatgtgctggac
atcgctatagtcttggtttccttcatctttatcgttttcaccgtgatgaatatggaagac
actcttcccattaatcccagcatcctaaaaatcactagagtgctcagactagcacaagtg
ctgaaggccaagaagatcagagttctgctgagaaccattactaagacactgtcacaggtt
ggaaacctctgtctgctctttatgttcttctttttcatctacgctgcactgggagtggag
ctgtttggcaacctcgaatgcaccctggactatccgtgtgaaggcataaatcagtacgct
aactttaagaacttcgggatggcgctgctcacactgtacaaagtgtgcacaggggacaac
tggagtggcattttgaaggacacattgcgcccatgccgtcccagtgataaagcctgtccc
agctacctgtggtgggcctcgccaatctgcttcgccacctttgtggtcatggttcacttt
gttctggcaaacctggtcgtggcagccgtcatgcaagcgttggaggacagcaaagagaaa
aggcctaagactgaatcctcagacatcatgcagcagccccaggagtctccgggcgaaccc
gtcatatccagctcggctggtaccaccgaaggagtccaattgtaa
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