Oreochromis niloticus (Nile tilapia): 100705321
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Entry
100705321 CDS
T06104
Name
(RefSeq) cohesin subunit SA-1 isoform X3
KO
K06671
cohesin complex subunit SA-1/2
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
100705321
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
onl03036
]
100705321
Chromosome and associated proteins [BR:
onl03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
100705321
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
DHR-2_Lobe_C
NNH7
DUF3853
Motif
Other DBs
NCBI-GeneID:
100705321
NCBI-ProteinID:
XP_005467375
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All DBs
Position
LG2:16026240..16049948
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AA seq
1220 aa
AA seq
DB search
MASRSSGLDSLEELESPTDSGSDYEATMKGTKRRKPAVSKQPPKRTRHNAALKGMSSPSG
ISVPTPPGPSPQSISQGTSMQLSARSVRSMNEESQIISAKDIYDAVCSGKSAMVTVVDEW
LDSYKRSREAGLLVLINFIVQSCGCKGVVTRKMFDSMQNAEIISTLTKEFNEDSVNYPLC
TPGPQLKRFKAGLCEFARVLVRSCRNSLVYDEYLFPSLLALLTGLSDSQVRAFRHTSTLL
AIKLMTGLVEVAVVVSVQLQTTQQQYNTENSKRAHDRASDRLEELQATVRELRENREELS
SMMNATFRGVFVHRYRDQLPEIRAVCIEELGLWLKMDPEDFLNDGCLKYLGWTMHDKQSP
VRLQCVRALQGLYQEKEFIGRLELFTSRFKERILSMVLDKDPDVAVEVVNLLLLIQQRTE
EGLDEEECGHIYPLVYASHRGLASAAGGFLYNKLKGVMTSHSQENDKANNAAFFQILISF
YIQSEFHEHGAYLVDSLWHVAGSELRDWETMTTFLLQDDELMYEEEGVLIELMMCAIRQA
AQATPPVGRTQGKKNLSMKDKKIQEQDKRRITTHFIPLLPQLLAKYSADARNVKLLLKAP
LYFDLEMYSSAQWLEKHLDLLLSQVCGIVEKHTEVAVLEACAHLASTLSSDCYTFSSRAQ
LAFSQLFDVLTECFSTYVNDLLQVGECGTADDDDTYSGATALKRIAALSSAKDPTAWKLF
DSCLELLKSRMESRELDKELMAPAMKCAAFHLMWAKVNVVNSKPTEAELKRLKKEVRSFC
RVCQDCLSLNQTDIRDQAFELLCDLLLLYSVGSVRSEPALRALAHLPSDSLRSELAAFLL
DYVFTDTEDVELDAESEEEMKISLLQKKRNQLAGYCKLVIYGVLDLTAATDVFKHYSKYF
KDFGDIIKETLSKSKLINPVQSAKTVCLSLQQLFSEMLTEHHSRQDLTEIRDLAKRLAMS
FGIDLHRVRKPLVALHMDGIRFAFRDPQEGEEPNPNVAFLKILSEFSFKLLQPDRAQLAE
FLKSACPSAALSWPPVKLYQRSLEARSTSKATEQEGGDEVPSHDTPVVKRRRTTAQGSAS
TTRGPWLDNSSIQSSLHTPALTSTVQKQPAKRMASRKPRPVESDISSSLTEPESEDEFSP
GLQMRKVKPNKRRLASSSKNTPSPGQQDLNSHLNLLSLIEDDIAERDEDEIEDYQSDSDT
GYTLPSTRHTSVSVLDELFD
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtagaagttcaggtttggacagtcttgaggagttagagtcccccactgactca
ggcagtgactatgaggccaccatgaaaggaacaaagcgaagaaaaccagcagtatctaag
cagccacccaagagaaccaggcataatgctgcactgaaggggatgtctagccccagtggc
atctcagttcccacccctccaggtccttccccacaatccatctcccaggggacatccatg
cagctctctgctagatctgttaggagcatgaacgaggagagccagattatcagcgcaaag
gatatctatgatgctgtctgctctggaaagagtgccatggtgacggtggtagacgagtgg
ctggatagctataagcggagccgagaggcgggactgctggtgctcatcaacttcattgtt
cagtcctgcggatgcaaaggtgttgttaccagaaagatgtttgacagcatgcaaaatgct
gagatcatcagcaccctaaccaaagagttcaatgaggattcagtgaactaccctctgtgc
actccagggccccagctgaagcgtttcaaagcaggcctgtgtgagtttgctagggttcta
gtgcgctcctgtcggaatagccttgtttatgatgaatacctcttcccttccctgctggct
ctgctcaccggcctctcagactcccaggtccgagccttcagacacaccagtaccctgctt
gccataaagttgatgacggggttggtggaagtagctgtagtagtttctgttcagctgcag
accacccagcagcaatacaacacggaaaacagcaagagggcgcacgacagagcctctgac
agactggaggaactgcaggccaccgttagagagttgcgagaaaacagagaggagctgtcc
tccatgatgaatgccactttccgtggtgtgtttgtgcatcgttatcgggaccaattgcct
gagatccgggcagtgtgtattgaagagttgggcctttggttgaaaatggaccctgaggac
tttcttaatgatggatgtcttaaatatttgggatggaccatgcatgacaagcaaagtcca
gtgcgtctgcagtgtgtgcgtgccctgcagggtctgtaccaggagaaagaattcattggg
cgcctggagcttttcaccagcagatttaaagagagaattctcagcatggtgctggacaag
gacccagacgtggcagtggaagtggtcaatctgctgctgctgatccaacagagaacagag
gaaggactggacgaagaggagtgtggccacatttatccactggtttacgcttcacaccga
ggtctggcatctgcagctggtggcttcctatacaacaagctgaaaggtgtgatgaccagt
cacagccaggagaatgacaaagccaacaatgcagccttttttcaaatcctcatctccttc
tacatccagagtgagttccatgagcatggagcatatctggtggacagcctttggcatgtg
gcaggatctgagctgagagactgggagacaatgaccactttcctgctacaagatgatgaa
ctgatgtatgaggaggagggggtgctcatagagctgatgatgtgtgcgatcagacaggca
gcacaggcaaccccacctgttgggagaactcagggaaaaaagaacctcagtatgaaggat
aagaaaatccaggaacaagacaagagacgcatcacaacacacttcatccctttactgcca
cagctgcttgccaagtactcagcggatgcaaggaacgtgaaactgctcctcaaagctccc
ctgtactttgacctggagatgtacagcagcgctcagtggctggaaaagcatttggacctg
ctgctgtcccaggtatgtggcattgtggagaagcacacagaggtcgccgtactggaggct
tgcgcccacctggccagcactctcagctccgactgctacaccttctcctcccgcgcacaa
ctggcattcagccagctgtttgatgtccttactgaatgtttcagcacctacgtaaatgac
ctgctccaggttggagagtgtggtactgcagatgatgatgacacatacagtggagccact
gccttaaaaaggattgctgcccttagcagtgctaaggacccaactgcctggaagctgttt
gattcctgtcttgagctgctgaagagccggatggaatccagagagcttgataaggagctg
atggcgccagctatgaagtgtgcagcttttcacctgatgtgggccaaagtgaatgtggtg
aactccaagccaactgaggcagaactgaagcgcttgaagaaggaggtgcggtcgttctgc
agagtctgtcaggattgtttgtctttgaatcagacagatatcagagatcaagcatttgag
ctgttatgtgacttgctgttgctgtacagtgtgggttcagtccgctccgagcccgccctc
cgggcactggcccacctgccatctgattctctgcgctccgagttggccgctttccttctg
gactacgtcttcactgacaccgaagacgtcgagctcgatgctgagagcgaggaggagatg
aagataagtcttcttcagaagaagcgtaaccaacttgccggctactgtaagctggtcatc
tacggggtgctggacctcactgctgccacagatgtcttcaagcactacagcaagtacttt
aaggactttggtgacatcatcaaagagactttgagcaagagcaagctcatcaaccccgtg
cagagcgccaagactgtctgtctgagtctgcagcagctgttttcagagatgctcacggag
caccacagcaggcaggatctcactgagattagagacttggccaagaggcttgccatgagc
tttggcattgatcttcatcgtgtccgcaaaccactggtggccctgcacatggacggcata
cgtttcgcatttcgggacccacaggagggagaggagccaaatccaaatgtggccttcttg
aagatcctcagcgagttcagttttaagttactgcagccggaccgcgcccagctagctgag
tttctaaaatctgcatgtcccagtgctgccctctcctggccgccagtcaaactgtatcag
cgttctttggaagctcgctccacctctaaagccactgaacaggagggaggtgatgaagtc
ccttctcatgacacacctgtagtgaaacgcaggaggaccacagctcagggttcagcgtcc
accaccagaggaccctggttggacaacagcagcatccagagcagcctgcacaccccagcc
ctcacctccactgtgcagaagcagcccgccaagcgcatggcatccaggaaaccaagaccc
gtggagtcagatatcagcagcagcttaactgagccggagtcagaggatgagttctcccca
gggttacaaatgcgaaaagtgaaacccaacaaaagacggctggcttcctccagcaagaac
accccctctccagggcagcaagacctgaactcccacctcaacttgctttccctgattgaa
gacgacatcgcagaaagagatgaggacgagattgaagattatcaaagtgactctgacact
ggatacacactgccttccacacgtcacacctcagtcagtgtccttgacgagctctttgac
tga
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