KEGG   Oreochromis niloticus (Nile tilapia): 100705373
Entry
100705373         CDS       T06104                                 
Symbol
rfc3
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
onl  Oreochromis niloticus (Nile tilapia)
Pathway
onl03030  DNA replication
onl03410  Base excision repair
onl03420  Nucleotide excision repair
onl03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:onl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    100705373 (rfc3)
   03410 Base excision repair
    100705373 (rfc3)
   03420 Nucleotide excision repair
    100705373 (rfc3)
   03430 Mismatch repair
    100705373 (rfc3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:onl03032]
    100705373 (rfc3)
   03036 Chromosome and associated proteins [BR:onl03036]
    100705373 (rfc3)
   03400 DNA repair and recombination proteins [BR:onl03400]
    100705373 (rfc3)
DNA replication proteins [BR:onl03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    100705373 (rfc3)
  DNA Replication Termination Factors
   ELG1-RFC complex
    100705373 (rfc3)
Chromosome and associated proteins [BR:onl03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    100705373 (rfc3)
DNA repair and recombination proteins [BR:onl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     100705373 (rfc3)
  Check point factors
   HRAD17(Rad24)-RFC complex
    100705373 (rfc3)
SSDB
Motif
Pfam: RFC_C RCF1-5-like_lid DNA_pol3_delta2 Rad17 AAA AAA_22 AAA_16 AAA_11 ABC_tran DUF2247 ATPgrasp_ST
Other DBs
NCBI-GeneID: 100705373
NCBI-ProteinID: XP_003458307
Ensembl: ENSONIG00000012648
UniProt: I3K471
LinkDB
Position
LG10:16140955..16146018
AA seq 356 aa
MSLWVDKYRPSSLGKVDFHKEQAAQLKKLVQCGDFPHLLVYGPSGAGKKTRIMCLLRELY
GPGVEKLRIEHQTIVAPSKKKIEINTIASNYHLEVNPSDAGNQDRVVIQELIKTVAQSQQ
IQSSTQRDFKVVLLTEVDRLTKDAQHALRRTMEKYMATCRLILCSTSTSKVIGPIRSRCL
AIRVPLPSIEEVCSVLTSVCKKEGLVLPPELAKQISEKSGRNLRKALLMCEACRVQQYPF
SVDQDVPETDWEVYLRETANAIVSQQTPQRLLEVRARLYELLTHCIPPEIIMKCLVKELL
NNCDGQLKTEVAHIAAYYEHRLQLGSKAIYHLEAFTAKFMAIYKKFMEDGLDAMMF
NT seq 1071 nt   +upstreamnt  +downstreamnt
atgagtttgtgggtggacaaatatcgtccgtcgtccctcgggaaagtggactttcataaa
gagcaggcggctcagctcaaaaagctggttcagtgtggtgacttcccacacttgttggtg
tacggtccatcgggtgcaggcaagaagactcgcatcatgtgtctgctgagggagctctac
ggtcctggggtggaaaagcttcgcattgagcaccagaccattgtggctccctcaaagaag
aaaattgagattaacaccatagccagcaactatcacttggaagtaaatccaagtgatgca
gggaaccaggaccgtgtggtgattcaagagctgatcaaaactgtggcacagtctcagcaa
atccagtcgagcacacagagagactttaaagtggtgttgctaacagaggtggacagactg
acgaaggatgcccagcacgctttgcgtcggacgatggaaaagtacatggccacctgcaga
ctcattctctgctccacctctacttccaaagtcatcgggccaattaggagccgttgtctg
gcgattagagttcctctgccgagcatagaagaggtttgcagtgttcttacatccgtctgt
aaaaaggagggtctcgtcctcccacctgagctggccaaacaaatcagcgaaaaatctggt
cgcaacctccgtaaagcgctgttgatgtgcgaagcctgccgagtgcagcagtatccattc
tcagtggaccaagacgtcccggagacagactgggaggtttatcttagagaaacggctaat
gccatcgtcagccagcagactcctcaaaggttgttggaggtccgagccagactgtatgag
ctcctgacccactgcatccctcctgagattatcatgaagtgtctcgtgaaagagttgctt
aataactgtgatgggcagctgaagacggaggtggctcacattgcagcctactatgagcac
agactacagctggggagcaaagccatctaccacctggaggcattcactgccaagttcatg
gccatctacaagaagttcatggaagatggtctggatgcgatgatgttttga

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