Oreochromis niloticus (Nile tilapia): 100705373
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Entry
100705373 CDS
T06104
Symbol
rfc3
Name
(RefSeq) replication factor C subunit 3
KO
K10756
replication factor C subunit 3/5
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl03030
DNA replication
onl03410
Base excision repair
onl03420
Nucleotide excision repair
onl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
100705373 (rfc3)
03410 Base excision repair
100705373 (rfc3)
03420 Nucleotide excision repair
100705373 (rfc3)
03430 Mismatch repair
100705373 (rfc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
onl03032
]
100705373 (rfc3)
03036 Chromosome and associated proteins [BR:
onl03036
]
100705373 (rfc3)
03400 DNA repair and recombination proteins [BR:
onl03400
]
100705373 (rfc3)
DNA replication proteins [BR:
onl03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
100705373 (rfc3)
DNA Replication Termination Factors
ELG1-RFC complex
100705373 (rfc3)
Chromosome and associated proteins [BR:
onl03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
100705373 (rfc3)
DNA repair and recombination proteins [BR:
onl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
100705373 (rfc3)
Check point factors
HRAD17(Rad24)-RFC complex
100705373 (rfc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
Rad17
AAA
AAA_22
AAA_16
AAA_11
ABC_tran
DUF2247
ATPgrasp_ST
Motif
Other DBs
NCBI-GeneID:
100705373
NCBI-ProteinID:
XP_003458307
Ensembl:
ENSONIG00000012648
UniProt:
I3K471
LinkDB
All DBs
Position
LG10:16140955..16146018
Genome browser
AA seq
356 aa
AA seq
DB search
MSLWVDKYRPSSLGKVDFHKEQAAQLKKLVQCGDFPHLLVYGPSGAGKKTRIMCLLRELY
GPGVEKLRIEHQTIVAPSKKKIEINTIASNYHLEVNPSDAGNQDRVVIQELIKTVAQSQQ
IQSSTQRDFKVVLLTEVDRLTKDAQHALRRTMEKYMATCRLILCSTSTSKVIGPIRSRCL
AIRVPLPSIEEVCSVLTSVCKKEGLVLPPELAKQISEKSGRNLRKALLMCEACRVQQYPF
SVDQDVPETDWEVYLRETANAIVSQQTPQRLLEVRARLYELLTHCIPPEIIMKCLVKELL
NNCDGQLKTEVAHIAAYYEHRLQLGSKAIYHLEAFTAKFMAIYKKFMEDGLDAMMF
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgtgggtggacaaatatcgtccgtcgtccctcgggaaagtggactttcataaa
gagcaggcggctcagctcaaaaagctggttcagtgtggtgacttcccacacttgttggtg
tacggtccatcgggtgcaggcaagaagactcgcatcatgtgtctgctgagggagctctac
ggtcctggggtggaaaagcttcgcattgagcaccagaccattgtggctccctcaaagaag
aaaattgagattaacaccatagccagcaactatcacttggaagtaaatccaagtgatgca
gggaaccaggaccgtgtggtgattcaagagctgatcaaaactgtggcacagtctcagcaa
atccagtcgagcacacagagagactttaaagtggtgttgctaacagaggtggacagactg
acgaaggatgcccagcacgctttgcgtcggacgatggaaaagtacatggccacctgcaga
ctcattctctgctccacctctacttccaaagtcatcgggccaattaggagccgttgtctg
gcgattagagttcctctgccgagcatagaagaggtttgcagtgttcttacatccgtctgt
aaaaaggagggtctcgtcctcccacctgagctggccaaacaaatcagcgaaaaatctggt
cgcaacctccgtaaagcgctgttgatgtgcgaagcctgccgagtgcagcagtatccattc
tcagtggaccaagacgtcccggagacagactgggaggtttatcttagagaaacggctaat
gccatcgtcagccagcagactcctcaaaggttgttggaggtccgagccagactgtatgag
ctcctgacccactgcatccctcctgagattatcatgaagtgtctcgtgaaagagttgctt
aataactgtgatgggcagctgaagacggaggtggctcacattgcagcctactatgagcac
agactacagctggggagcaaagccatctaccacctggaggcattcactgccaagttcatg
gccatctacaagaagttcatggaagatggtctggatgcgatgatgttttga
DBGET
integrated database retrieval system