Oreochromis niloticus (Nile tilapia): 100705533
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Entry
100705533 CDS
T06104
Symbol
lama1
Name
(RefSeq) laminin subunit alpha-1 isoform X1
KO
K05637
laminin, alpha 1/2
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04510
Focal adhesion
onl04512
ECM-receptor interaction
onl04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100705533 (lama1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100705533 (lama1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
100705533 (lama1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_1
Laminin_EGF
Laminin_G_2
Laminin_B
Laminin_N
Laminin_II
Laminin_I
Laminin_G_3
DUF1319
Motif
Other DBs
NCBI-GeneID:
100705533
NCBI-ProteinID:
XP_005460524
Ensembl:
ENSONIG00000015109
LinkDB
All DBs
Position
LG9:complement(30939178..30995976)
Genome browser
AA seq
3075 aa
AA seq
DB search
MKVLLLLLLMGQAAAQHRGLFPAILNLASNAVISSNATCGEPEPEVYCKLVEHVPGRRIK
NPHCLKCDANSVLSRERHPITNAIDGTNRWWQSPSIKNGQQFHWITITLDLKQVFQIAYI
IIKAANSPRPGNWILERSLDGISFEPWQFYAISDSECLYRYNITPRLGPPTYKSDTEVIC
TSYYSRLNPLEHGEIHTSLINGRPGADDLTSDLLNFTSARYIRLRLQRIRTLNADLMTLS
ARDPREIDPIVTRRYYYSIKDISVGGMCICYGHAQSCPLDPVSKKLHCVCEHNTCGESCN
KCCPGYHQQPWQPGTISDGNTCEKCNCHNKADNCYYNQTISDLSLSLNTHGVRRGGGVCF
NCQQNTAGINCETCKDGYYRPAEVSPYSDFPCVECKCDLRGSKSSVCTRDNTQPGLLVGQ
CMCKEGFAGQQCDRCAFGYRDFPQCVRCECNLSGSINTDPCSPCICKENVMGAHCDLCKP
GFFNLKESNPLGCTSCFCFGVSDVCESSGLSIGQVVTAEALLFLSETITTTPVFHSNEIP
IHSNISSGATHQQMLWWEAPQSFLGNKLLSYGGFLKYFVVYDAPLDFENPTLSAHCDIII
KGNGLALRLSRPLPLSLSTLAEHLVSVPMVWQQFVYDQTGSHVTRDDLLLVLADVTSLVV
RVYLNTSASGTIRLSSVSLDIGDPSLHSEVQALAVERCECPWGYSGTSCESCLPGFYRVG
GILFGGNCMQCECNDHATECDIHGVCVACTHNTTGSHCDQCLQGFYGDATEGTTDDCQLC
PCPLTEPSNRFSPTCVLDPSGQVLCDQCKDGYTGTNCEKCASGFYGNPQVVGGTCIRCEC
NGNVDISEVGHCDTVTGECLRCLGNTAGRHCELCQPGYYGDAVHTKDCWECDCDVNGALS
SQCNVTTGQCFCRENVTGRTCDHCKSGFYGLQSGHGCIPCGCSKSGSLFESCDKEGQCQC
VEGVTGHKCDRCSRGYYGFHDKGCIACSCDHTGGNCNPENGECICPAHTEGETCNKCVKN
YWGHNPTTGCKPCSCSEAGSSSPLCDLTNGQCLCKEGFFGRSCDQCAPGYYGYPACSACG
CDMAGTEETFCNATLGVCSCQNTGNCVCKPGVSGRRCEECVSGWFGLSAENLDGCLQCFC
SGLSRDCEEQGGLTRVPVYLAYSATLPFLSLVSQSNLQGTVSGVYRQGSEMLLDTRQLNT
SGLTGPLYWRLPNQFEGNQLLSYGGLLSYTVTFYAEDGAGLSNQEPQVLMRGGTLRKLAI
YTDIIAPGNGVTTQHDIRLTEHKWKYFNSVSQRVVSHADFMSVLSNIEYIIIKASYGTRL
QQSRISNITMEMAVEVEESEVRENVARLIESCICPPGYTGLSCQDCDVGHFHQPQSELSP
QSKKSMFVRPCVPCRCNNHSQSCYTETGECQDCKHHTSGQSCEKCASGYYGSVKGFIDDC
SPCACPLLNNSFSPTCILEGAAGDFRCTACQPGYEGRYCERCSVGYYGNPSVPGGVCSQC
SCTAWGSLHLLCDVLTGECECKDGVKGQSCNECEERNIFQEGECVSCDDKCTGILLDELD
ELHNHFLFFNLSTIAMSSYRQLWLLENQTREMQVVSSQNNSVMVSLSRVEEGLNYLTSEL
DSLLQQVNSLSNDVQIVDVSTNNSFSRGALLLEGISRLQNNIQLLQREAAHLNQTAEEEL
GSANQTHLLEDVESILNSIKDVNLTAAEVVANQELSRSESLFQSVQINFLSSRVATGDKL
GPLSTSLTADIKTLQHANTTLSDTVQQTIETNFLLDTAHTLLQRYQSGHQNLSVVCLSLD
SQMEDSQLLLEDAVSLTEELTNHTRQVEVLAAELDQWRPLLRKQVNGLVMGLKKNDALEN
VYRAEKHAHLLQSYAHSLHSPLSSVCNMSQNGSQLAQFDSDITERVDSAHQMASVALVSA
SLALNMSVQSEQPLSEEGRAKLEVSSAILEESRRIGSAAEDLQLNVSMVTIRLRLVRDSV
HNSSFLLRKPVKVLQSLSNGSSEALQQTQIQAAAAHSKLQEAMQRLQRLRAQLKDSSSLV
ENANNTLRETSQLVTLTHIAANEMQHKMEEAEYRTQHLMDRIKPMRMLGETLSRNLSDIR
ELIYQARRQAASIKVALQADRGCVRSYRPSVQSSNFNTLNLIVKTTTPDNLLFYLGSNTT
MDFLAAEMHNGQVSLLWDVGSGSTRLEFPGLDITNNRWTKINATRFGPHVALSVHQLDSK
SALLPAVTATSPGTFQVLDIDENSFVHIGGLGAHTQRPAALRSTTFQGCLGEASLNEQNI
GLWNYDHREGECGGCFSSPQAEETSFHFDGSGYSVVQKSLRSTSTLIVLQFKTLSPVGLL
LYLASNNTRDFLSMELVEGRVRLTFDLGSGALMLTSNRKYNTGVWYKITLQRNKRKGYLS
IMAADQSSEKEVLEADSPGKASDLNRSDLDPIFIGGFPASRPIRRQVASRSYVGCIKNVE
IARSNFDLLRDAHGVRKGCILKAVRSVSLLAGGYVQITPPSFGQEAELLFSFSSNNQSGV
LLAAFSSDRSHKQHFLSVHLVSGALEVELGEVGGATRKVTVIKPDGRSFSDRMKHSAIIT
INKKSLSIQIDEEHKKLVSLLPGVFSQLSPASLFIGGLPSGNEARLPIRLQKLSRLFKGC
IQHLAVGRVLVDLSGALRYEGVKFDKCVLEEKAGDVLLPDDQDVNVTPDPTHLPLPQPTQ
LGALSPEGLMCASDGELTFVPSAVQFGLSRHSHMTFIINPSTVRKSVSVRLLFRSWALDG
LILLLSDSKQMDFVVLSLKGGRLMMSADLGKGLASITSSVAVNNGEWHTVVAEVGRRLMS
VSVNSLKTDSISVKGNQLDVDNKVFLGGTPHTMTSRRIRDSSSFSGCVGSISLNGVMLDK
PASQHGVTSCFTRDQIGSYFNGSGYAEMMHDGYKVGSDMTVSLEFQTSQSEGVLLGISSA
KVDAVGLEIINGQVVFNVNNGAGRVSVRSVGQMLCDGQWHRLVAQKTKHAFSLTVDERTY
TTANPYPQSTSAETNNPVFLGGYPAGVKQNCLSISSSFRGCLRNLQLLKSHLTKSLDLSS
AHFLLGITPNSCPAS
NT seq
9228 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtgctgctgcttttgttgttgatggggcaagccgctgctcagcacagaggtctg
tttcccgccatattgaatctggccagtaatgcagtaatcagcagtaatgcaacatgtgga
gaaccagaacctgaagtctactgcaagctggtggagcatgttccaggacggaggatcaag
aacccacactgtctcaaatgtgatgccaactccgttctgtccagagaacgtcatccaatc
acaaatgctattgatggaaccaatcggtggtggcaaagtccaagtatcaagaatggacaa
cagtttcactggattaccatcacactggatttgaaacaggtttttcagatcgcgtacatc
attattaaggctgctaattctcctcgaccaggtaattggatccttgagcggtctctggat
ggaatttcctttgagccctggcaattttatgccatcagtgactctgagtgtttatatcgc
tacaacatcacaccacgactgggaccaccaacctataagagtgatacagaggtcatctgt
acatcttattattccagattaaacccactagagcatggagagatccatacctccctaatt
aatggccgacctggagccgatgatttaacctcagatctgttgaactttacgtcggcgcgt
tacatcagactgagacttcagcgaatccgaacactgaatgctgacctgatgaccctgagt
gctcgcgatcctcgagaaattgaccctattgtcactcggaggtattattactccatcaaa
gacatctctgtgggtgggatgtgtatctgctacggacacgctcagagctgcccacttgac
cctgttagcaagaagcttcattgtgtatgtgagcacaatacttgtggagaaagctgtaac
aaatgttgcccaggttaccatcagcagccatggcaaccagggaccatctccgatggaaac
acgtgtgagaaatgtaactgtcataataaagcagacaactgttactacaatcaaaccatc
tctgacctctctttgagtttaaacactcacggtgttcgtcggggaggtggagtttgtttt
aactgtcagcagaacacagctggcataaactgtgagacctgcaaagatggatactacaga
cctgctgaggtttctccatattctgactttccatgtgttgaatgtaaatgtgatctgaga
ggctcaaagtcttcagtctgcaccagagacaacacacagccaggtttgcttgtaggtcag
tgcatgtgcaaggaggggtttgcaggtcaacagtgtgaccgttgtgcgtttggatacaga
gattttcctcagtgtgttcgctgtgagtgtaacctgtcaggcagcatcaacactgaccca
tgcagcccctgcatctgcaaggagaatgtgatgggagctcactgtgatctgtgcaagcca
ggtttttttaacctcaaggagagcaatcctctcggatgtaccagctgcttctgcttcggt
gtgtctgatgtctgcgagagctctggcttgtccatagggcaggtggttactgcagaagct
ttgctcttcctctctgaaacaatcaccaccacccctgtatttcacagcaatgagataccc
attcacagcaacatctcctctggtgccacccaccaacaaatgctgtggtgggaggcaccc
caaagtttccttggcaacaagctgttgtcttatggaggtttcctgaagtactttgtggtt
tatgatgctccacttgactttgaaaaccccaccctgtccgcccactgtgacatcattatc
aagggtaatggtttggctcttcgtctttcacgtcctctcccattatccctctctacactg
gctgagcatttggttagcgtgccaatggtctggcagcaatttgtgtatgaccaaacaggc
agtcatgttacccgagatgacctgctattggttcttgccgatgtgacgtcactggttgtc
agagtttacctgaatacctccgccagtggaacgatacgcctcagctccgtctctctggac
attggtgaccctagcttgcattctgaggttcaagcacttgctgtggagagatgtgaatgc
ccgtggggttacagtggcacttcctgtgagtcgtgtctaccaggtttctacagagtgggt
ggaatcttgtttggaggaaactgtatgcagtgtgaatgtaatgatcatgccactgagtgt
gacatccatggagtttgtgtggcttgtacccacaacaccactggttctcattgtgatcag
tgtcttcagggtttctatggtgatgctacagagggaacaacagatgactgccagttgtgt
ccatgtcctctgacggagccatccaacaggttcagtcccacttgtgtgttggatccatct
ggacaggtactgtgtgaccagtgtaaggatgggtacactggaaccaactgtgagaagtgt
gctagtggtttctatggaaacccacaggtagtgggtgggacctgcattcgctgtgagtgt
aacggtaatgtggacatcagtgaggtaggacactgtgatactgtcaccggggaatgcttg
cgttgcctcggcaacacagcagggagacactgcgagttgtgtcagcctggatactatgga
gatgccgtgcacaccaaagactgttgggaatgtgactgtgatgtcaatggggccctttcc
agtcaatgtaatgtcacaacaggccagtgtttctgcagagagaatgtgacaggacgcacc
tgtgaccactgcaagtcaggattctatggactgcaaagcggccatggctgtattccatgt
ggctgcagcaaatcaggatctctctttgaatcatgtgataaggaggggcagtgccagtgt
gtagagggtgtgactggacacaaatgtgaccgttgcagtaggggttactatggttttcat
gacaaaggctgcatagcatgctcctgtgatcacactggtgggaactgtaaccctgagaat
ggagagtgcatctgccccgcccacacagagggagagacctgcaataagtgtgtaaaaaat
tactggggccataaccccaccacaggctgcaagccttgcagctgcagtgaagcaggaagc
tcctcccctctgtgtgacctgaccaatggacaatgtctgtgcaaagaggggttctttggc
aggtcatgtgaccagtgtgcacctggttactatgggtacccagcatgctcagcctgtggt
tgtgacatggccggcacagaggagaccttttgcaatgctaccttgggggtgtgttcctgc
caaaacactggaaattgtgtgtgcaagcctggggtctcaggccggcgttgtgaagagtgt
gtttctggttggttcggtctgtcagctgaaaatctagacggttgtttgcagtgtttctgt
tcaggactgagccgagactgcgaggaacagggaggactgaccagagtaccagtgtacctg
gcttactccgccactctcccattcctgtcattggtcagtcagtcaaacctgcagggtact
gtatctggagtgtaccgtcagggcagtgaaatgctgctcgacacccgtcagctcaacacc
agcgggctgacaggcccgctctactggaggctccccaatcagtttgaaggaaaccagcta
ctgtcatatggcggactgctttcttacactgtcaccttttacgctgaggatggtgcagga
ctgtctaatcaggagcctcaggtgctaatgaggggtgggactctgaggaagcttgccata
tacactgacatcattgccccaggcaatggtgtcacgactcagcatgacatcaggctgaca
gagcacaagtggaagtattttaactcggtatcacagagggtggtgagtcacgctgacttc
atgtccgtcctcagtaatattgagtacatcatcattaaagcgtcttatggtaccagactg
cagcagagcaggatttccaacattaccatggaaatggcagtggaggtggaggagtcagaa
gtcagagaaaatgtagccagattgattgagtcatgtatctgcccacctgggtacactgga
ctctcatgtcaggattgtgatgtgggacacttccatcaacctcagtctgagttgtcaccg
cagagcaagaagtcgatgtttgttcgcccctgtgttccgtgtcgctgcaacaaccacagc
caaagttgctacactgagacgggagagtgtcaggactgtaagcatcacaccagtggacag
agctgtgagaaatgtgcatcaggttattatggaagtgtcaaaggattcattgacgactgc
tcaccatgtgcatgccccctgctgaacaacagctttagtcccacctgcattttggaagga
gcagcaggtgatttccgctgcaccgcctgtcagcctggctatgaagggagatactgtgag
aggtgttctgttggttactatggtaacccatcagtaccaggcggtgtgtgttcacagtgt
agctgcactgcatggggctccctccacttgctgtgtgacgtgctgactggagagtgtgaa
tgtaaggatggggtcaaaggtcagtcatgtaatgagtgtgaagagaggaacatcttccag
gaaggcgagtgcgtgtcatgtgatgacaaatgtactggcatcttgttggatgagctggat
gagttgcacaatcacttcctgtttttcaacctgagtaccattgccatgtcatcataccgg
cagttgtggctgctggagaatcagaccagagaaatgcaggtggtatcttcacagaacaac
tctgttatggtgtctctgtccagagtggaagaaggtctaaattatttgacctctgagctc
gactctctactgcagcaggtcaacagtctgtctaatgatgtccagattgtggacgtgtcc
acaaacaacagcttttcccgaggcgcgctcctgttggagggcatcagcagacttcaaaac
aacattcaactgcttcagagagaagcagcacacctgaatcagactgcagaggaagaactg
ggttcagccaatcagacgcatctgctggaggacgtagagtccatattaaacagcatcaaa
gatgtaaacctaacagctgcagaggttgtagccaatcaggagctcagtcgttcggagtct
ctctttcaatcggtgcagatcaacttcctgtccagcagggtggccactggcgacaagctt
ggccctctctctacttcacttactgctgacattaaaacactgcaacatgcaaacacaacg
ctgagtgacacagtgcagcaaaccatagaaacgaactttctgctggacactgcacacaca
ttgctgcagcgatatcagtctggccatcagaacctaagtgtggtgtgtctgtctttggac
tctcaaatggaggacagccagctgctgcttgaagatgctgtcagtttgacagaggagtta
acaaaccacaccagacaggttgaagtgttggctgctgagctggatcagtggcgccccctt
ctgaggaaacaggtgaatggtttggtaatggggctgaagaaaaacgatgctctggagaat
gtttaccgtgcagagaaacatgcccacctgctgcagagctatgctcactccttgcacagt
cctctgtcatcagtgtgtaacatgtctcagaatggcagtcagctggctcagtttgacagt
gacatcacagaacgagttgactctgcccatcagatggcttcagttgccctagtgtctgcc
tccttagctctaaacatgagtgtccaatcggagcagccactgtcagaagaaggccgagca
aagctggaagtttcctctgctattttggaagaaagccgaagaatcggcagtgcggctgaa
gacctgcagctgaatgtttccatggtaactatcagactcagacttgtcagagacagtgtt
cataactccagcttccttctacgtaagcccgtcaaagtgctacagagcctttcaaatggt
tcctctgaggcattgcaacagacccaaattcaggctgcagcagcgcactccaagttgcag
gaggcgatgcagcggctgcagagactcagagcacagctgaaggattcttcgtctttggtg
gaaaacgctaacaatacattgagggagaccagtcagctggtgactcttacacacattgca
gccaatgagatgcagcataagatggaggaggcggaatatcgtacacagcatctgatggac
agaataaaaccaatgagaatgttaggagaaacgttgagcagaaacttatctgacatccgg
gagctgatctatcaggctcggagacaggcagcatcgattaaggtggcactgcaagcggac
agaggctgtgttcgttcctacagaccatcggttcagtccagtaacttcaacactctgaat
ctgatcgtaaagacgaccactccagataacctgctcttttacctgggcagcaacactacg
atggacttcttggctgctgagatgcataatggacaggtttctctactgtgggatgtgggc
tcgggcagcacccggcttgagtttcctggactggatatcaccaacaatagatggacaaag
atcaatgctacacgatttggaccacatgttgcactttcagtccatcagctggattctaag
tcagctctgttgccagcagtaacagcaacatcaccaggaaccttccaagttttagacatc
gatgaaaacagctttgttcacatcggagggctgggagctcatacacagcggcctgcggca
ctgcgatcgaccaccttccagggctgcctgggtgaagcttcactgaatgagcagaacatc
ggactctggaactatgaccatagagagggagagtgtggcggttgcttcagcagtccccaa
gcagaggaaacttcctttcacttcgatggatctggctattcagtggtccagaagtctctg
cggtctacttccacgttaatcgttttgcagtttaaaactctgtctccagtcggattgttg
ctgtacctggcctccaacaacactagagacttcctgtccatggagttggtggaggggcgc
gttcgtttgacctttgacctcggctctggtgctctgatgctgacctccaacaggaagtac
aacactggagtgtggtacaaaatcacactgcagaggaacaaacgcaaaggttacttgtcc
attatggcagctgaccagtcatcagagaaggaagtgttggaagcggactctcctggaaag
gcctctgacctgaaccgctctgatctcgaccctatcttcattggtggatttcctgcttcc
agaccaatcaggagacaagtagcatcccggtcttacgtggggtgtataaaaaatgtggag
attgctcggtccaactttgacctgctaagggatgcacatggtgtcaggaaaggctgcata
ctcaaggcggtgcgaagtgtgtccctattggccggaggctatgttcagatcactccacca
tcgtttggtcaagaagcagagttgcttttctccttctcctccaacaaccaatcaggggtc
ctgctggctgctttcagtagtgaccgctcacacaaacagcacttcctatctgttcaccta
gtctcaggagcattggaggtggagcttggagaggtgggcggagccacacgtaaggtaact
gtgataaagcctgatggaagatccttcagtgacagaatgaaacattctgcgatcattacc
attaacaaaaagtcgctctcaatacagattgatgaggaacataagaagcttgtgtccctg
ttgccaggtgtattttctcagctgtctccagcctctctatttattggtgggctgccttca
ggcaatgaggcccgtctaccaatcagattgcagaaattatctaggttgttcaaaggctgc
atccaacacctggcagttggcagagtgcttgttgacctttcaggagctctgagatatgag
ggggtgaagtttgacaaatgcgtcttggaggagaaggctggggatgtgctccttcctgat
gaccaggatgtaaacgtaactcctgaccctactcatttacctctacctcagcccacacaa
ttgggtgccctgtcacctgaaggtctaatgtgtgcatcagatggggagttaacctttgtg
ccatcagcagttcagtttggcttgtccagacacagtcacatgaccttcatcatcaacccc
agcacagtcagaaagagtgtgtcggtgaggttgttatttcgaagctgggccctggatggg
ttgatcctccttctctccgactccaagcagatggactttgttgtcctcagcctaaagggg
gggaggctgatgatgtcagctgatctggggaaaggcctggcctccatcacctcatctgta
gctgttaacaatggagagtggcacactgtggttgcagaggtgggccggcggttgatgtca
gtgtctgtcaacagtttgaaaaccgactccatctcagtcaaaggaaatcagctggatgtg
gacaacaaagttttcctaggaggaacacctcacactatgaccagcaggagaatcagagat
agcagcagtttttcaggctgtgttgggtccatcagtctgaatggtgtcatgttggataag
ccggcgtcacaacatggtgtcacatcctgtttcaccagagaccagattggaagttacttt
aacggaagcggatacgctgaaatgatgcatgatgggtataaggttggctctgacatgaca
gtctctctggagtttcaaacaagccaatcagaaggagtgcttctgggaatcagcagtgcg
aaagtggatgctgtgggactggagataatcaacggacaggtggttttcaatgtgaataat
ggggcaggtcgagtgtcagtgcgttctgttggccagatgctatgtgatggacagtggcac
cgcctggtggcccaaaaaaccaaacacgcctttagcttaactgtagatgagcgaacttac
accactgcaaacccttacccacaatccacctctgctgaaactaataaccccgtcttcctt
ggaggatatccagctggtgtcaaacagaactgcttgtcaatcagctccagcttcagaggt
tgtctaaggaacctgcagctcttgaagtctcaccttaccaagtcccttgatctgagttct
gctcactttctgttgggaataacccctaactcatgccccgcttcctag
DBGET
integrated database retrieval system
