Oreochromis niloticus (Nile tilapia): 100705872
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Entry
100705872 CDS
T06104
Symbol
zeb1
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger E-box-binding homeobox 1
KO
K09299
zinc finger homeobox protein 1
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
onl03000
]
100705872 (zeb1)
Transcription factors [BR:
onl03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
100705872 (zeb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
zf-met
Homeodomain
zf-C2H2_15
zf-H2C2_5
zf-C2H2_6
Zn_SUZ12
Motif
Other DBs
NCBI-GeneID:
100705872
NCBI-ProteinID:
XP_003450274
Ensembl:
ENSONIG00000003766
LinkDB
All DBs
Position
LG9:29819884..29868139
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AA seq
1102 aa
AA seq
DB search
MADGPRCKRRKQPNPKRTNVTNYNNVVEAGSDSDDEDKLHIVEEEGSLADGADCESTLPE
DEHPREHCWDRVKEDCVSDGEDDVSTDALVEEILQQGDTAVIYPEAPDDEPQRQGTPDTG
IHDENGTPDSFSQLLTCPYCARGYKRYSSLKEHIKYRHEKTEESFSCPECNYSFAYRAQL
ERHMTVHKSGRDQRHITQSGGNRKFKCTECGKAFKYKHHLKEHLRIHSGEKPYECSNCKK
RFSHSGSYSSHISSKKCISVISVNGRSRLGNTKTQSQGQSPGLSTPPSVLRTQIREKLEH
SKPLQEQLPLNQIKTEPVDFEYKPTVISSPTVTAMNGGVFGGGAAAPLQGTVQAVVLPTV
GLVSPISINLADLQNALKVAVDGNVIRQVLENNAKGQVNSGLTTGTLHTPQQQLISAISL
PIVGQDGNAKIIINYNLDPNQGQLTAHNLKKEPEPLSPAQTTTNTFKSQKLPEDLTIRGN
RANEAKEKEEKTTKTCLLCDNCPGGLDALHALKHCKKDCLKLNGAGLDMSDSTVAALLSD
GGLCSQPKNLLSLLKAYFALNAEPTKDELAKISDSVSLPVSVVKKWFDKMQEGQISLGAP
TPPSEEEDTCESNSVVSLVPGKDKATTIPPVTQDSPTEATPAEINGAHSSPASPSPLNLT
AGGPGPAKKTQSAEGPLDLSLPKPARDEAERAASKTCLYPSPSSGSTNMDEPLNLTCTKK
EALPLSAMGTCPTALYASQPSAKPLDIVTTMQCLRALATNNKQTILIPQLAYTYTTTANS
PAGTETHETIHLNGVKEDRQDTGSEGVSTVEEQNDSDSGPPRKKMKKTDSGMYACDLCDK
IFQKSSSLLRHKYEHTGKRPHECGICSKAFKHKHHLIEHMRLHXGEKPYQCDKCGKRFSH
SGSYSQHMNHRYSYCKKETQSQAGGRESPEEDGETQVDMEVLSGAQRQLLAPSQLDSDER
GSSTREDEESEEEEEEEGVVDMDDIQVVQIGDEGGEEEDEPEERNEEEMKRVAVGEGGEE
EKSEIGEEEADTGQEDGLGSVQEETNVEEEKAMETEGSSPEAETEGGLSEREGGEVAEES
RGETNRNEVCEDEKQTPREKGD
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaagcagccgaacccgaaaaggaccaacgtg
actaactacaataatgtggtggaagccggctcagactcggatgacgaggacaagcttcac
atcgtggaggaggaaggcagcctggcggacggggccgactgcgaaagcaccctgccagaa
gatgagcaccccagggagcactgctgggaccgagtgaaggaggattgtgtttcggatggc
gaggatgatgtgagcacagacgccctcgtagaggagatactccagcagggagacacggcc
gtcatctacccggaagccccagatgatgagcctcagcgccagggcactcccgataccggc
atccacgacgagaatggaactccggattcgttctctcagctgctcacctgtccatactgt
gcacggggctacaagcgctacagctctctgaaggagcacatcaagtaccggcacgagaag
acggaggaaagcttcagctgccccgagtgcaactacagctttgcctaccgcgcccagctg
gagaggcacatgacggtccacaagagcggacgagatcagagacacataacacagtcggga
ggcaatcgtaaattcaagtgcactgaatgtggcaaagcatttaaatacaagcaccatctg
aaggagcacctacgcattcacagcggagagaaaccctatgagtgctccaactgcaagaag
cgcttctcccactcgggctcatatagctcccacatcagcagtaagaagtgcatcagcgtc
atctcagttaacggcagatcgcgcctagggaacaccaaaacccagagccagggtcagtcg
ccaggactttcaacgccaccctcggtcctccgcactcagattagggagaagctggagcac
agcaagcccctgcaggagcagctgcccctaaaccagatcaagacagaacctgtggacttc
gagtacaagccaacagtgatatcgtccccaactgtgaccgccatgaatggcggcgttttc
ggcggaggtgctgcagctcctctgcagggcacagtgcaagctgtggtcctacccactgtg
gggctggtatcacccatcagcatcaacctggcagacctgcagaatgcgctcaaagttgcg
gtggatggtaacgtcatccgtcaggtgctagaaaacaatgccaaaggccaggtgaactcg
gggctaaccactggaacgcttcacaccccacaacagcaactcatctcagccatcagtctg
ccgatagtgggtcaggatggaaatgcaaaaatcattatcaactacaatttggaccccaac
cagggtcagctaacagcccataatctaaagaaagagccagagcctctgtcaccagctcaa
accaccaccaacacgttcaagtcccagaaactcccagaagatttgactatcagaggcaac
agggccaatgaggcaaaagaaaaagaggagaagaccactaagacttgtctcctgtgtgac
aactgtcccggtgggctggatgcactccacgccctcaagcactgcaagaaggattgtctc
aaactgaatggcgcaggcctggatatgtccgattctactgttgctgccctgctgtcagac
ggaggactctgcagccagcccaagaacctcctgtcactgctcaaggcctactttgcctta
aacgcagagcccaccaaggatgagctggccaagatctctgactcagtcagcctcccggtc
tctgtggtaaagaagtggtttgacaaaatgcaggagggtcagatatctctgggtgcccca
acacctccctcagaggaagaggacacttgtgaatctaacagtgtggtgtctctggtccca
gggaaggacaaagccactacaattcctcctgtgacccaggacagcccaacagaagctacc
ccagcagagatcaacggcgctcacagctcgccagcctccccttcaccactaaatctgaca
gccggaggtcctggcccagcgaagaaaacccagagcgccgagggacctctagacctgtcg
ctgccgaagccagccagagacgaagcagagagagcggccagtaaaacctgcctttacccc
tccccttcctctggctccaccaacatggacgaacccctaaacttaacttgcacaaagaaa
gaggcattgccactctcagccatgggcacctgccccaccgcactgtacgccagccagcca
agtgccaaacctctcgacatcgtcaccacaatgcaatgcctaagagcactagccaccaac
aacaaacagactatcttgatcccccagctggcttacacctataccactacagcaaatagc
cccgcagggaccgagacgcacgaaaccatccacctcaacggagtcaaggaggacaggcag
gacacgggctcagagggtgtttccacagtcgaggagcagaacgactcagactcgggccct
ccaaggaagaagatgaagaagacggatagcggcatgtacgcctgcgacctgtgcgacaag
atcttccagaagagcagctcgctgctgaggcacaaatacgaacacacagggaagcgacct
cacgagtgcggcatctgcagcaaggccttcaaacacaaacatcacttgatcgaacatatg
cggctccacntcggggagaagccgtaccagtgtgacaagtgtggcaagcgtttctcccac
tcgggctcctactcccagcacatgaaccaccgctactcctactgcaagaaggagacgcag
agccaagcgggagggcgggagagcccggaggaggacggcgagacccaggtcgacatggag
gtcctgagtggggcacagagacagctcctggccccgtcccagctggactcggatgagcga
gggagcagcaccagagaggatgaggagagcgaggaagaggaggaggaggaaggcgtggtg
gacatggatgatatccaggtggtgcagataggggacgaaggaggggaggaggaggacgag
ccagaggagaggaatgaggaggaaatgaagagagtagcagtgggagagggaggagaggag
gaaaaaagcgagataggagaagaggaggctgacaccgggcaggaggatgggctcgggagc
gttcaggaagaaaccaacgtggaagaagagaaggcaatggaaactgaaggaagttcccct
gaagctgaaactgaaggaggcctgagcgaaagagaaggaggagaggtcgcagaggagagt
cgaggcgaaacaaacaggaacgaggtttgtgaagatgagaagcagacaccacgggagaaa
ggagactaa
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integrated database retrieval system
