Oreochromis niloticus (Nile tilapia): 100705890
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Entry
100705890 CDS
T06104
Name
(RefSeq) RNA exonuclease 1 homolog isoform X2
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
100705890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
onl03009
]
100705890
Ribosome biogenesis [BR:
onl03009
]
Eukaryotic type
Pre-60S particles
RNases
100705890
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EloA-BP1
RNase_T
Zwint
zf-CCCH_10
KIX_2
Motif
Other DBs
NCBI-GeneID:
100705890
NCBI-ProteinID:
XP_005459818
Ensembl:
ENSONIG00000016897
UniProt:
I3KJL0
LinkDB
All DBs
Position
LG12:28648354..28669319
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AA seq
1164 aa
AA seq
DB search
MFPSSGFFAGINCPFSQHGRCERPHCLYKHPAKQARDWFAVSFESSKVDFTEGQRPYTGC
GDDCLHELERINKEIESVRHEVEQERRRLSRYQTVQADRINNTPASKRESGSKTVDRKAY
GPSSRTDFTKAHQRGKKYVVDNSKPRTDLEYDPLSNFSADLLSLSSLTKEQKLKSRQVKD
KSPESTAPCIDKEPFAYQAPLSRSPSPEPLDVSSEGEDLIIDVPPSPEKTGQRTAKSVAG
KSSQVTAVEVKGGKKEPNLPNSPSPHNKITLSSSDSNKIHHYSVENSQDLLTISPAKESE
DLKNGANVVDLTDSPDDLANECQKITKAVLEKIPKQQDHNLNNPQCELPSIFEKMNPQKT
PMNLLFCKSPAANSSRRQVPQDRVQSHRCSEKSTPSAVMGNQKKSSKMSGQTQGIAADGD
KLPLEQAEQGSENSEFEGRHVLSTYVSSQFGAEPCSEQNLVMVNDEEVILINSSSDEEEE
GPNHSAVELSDSDPMEECYRIFMEANNEGKGTEETPSACLGAVDAEKMEVNVTSKGLPGR
KRVAHEAKQTEQPVAKSRPQPQVLVPLCEPVTSGFGSRSSVSSKTQQVQQRASTLTASVK
GGQAFVSSTSQKKPETQFSPSVLTQNPETLQPAPVRNAFVNYIPLGPAVIEVGNNLHLIL
PDGAFPVPISSNSNPVTPVLTPINQVHTRALAIKQTYHPHAVTPMHPMQRCRLTAPMLIP
AVARRPLLNSTFTSASLRSSSTISTVPQSSGQASAKPLPAKRKLKQQCEAAKDKVPHDVR
QRYVNMFTEEFLKTTPNVNDAFEKALAEEKTVYNRSANKLKYMSVAVNALKRLKSQSTVA
TKDESKVYSQKLKGNIPLNSTKFKGNYDMALYESLKDYILTDEKLIESNYPVQHPEKRGS
AVVFADRKVNADALKRICCRCGATYSVSQSGKHVRKEECNYHYGKGVENRVPGGVETRYS
CCQGVMGAPGCQVFKLHVHDALSLDGFVSTVPRGPSDRSCPGVYSLDCEMCYTIHGLELS
RVTVVNSSLEVVYDTFVKPENEVIDYNTRFSGVSEEDMKDHHASLRDVQETLLSFINADT
ILIGHCLETDLCLLKLLHGMVVDTSVVFPHRLGPPHKLTLNKLTAEYLRRIIQESVCGHD
TAEDATACMELMLWKVKEDGKLKK
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atgtttccctcctcgggcttttttgccggtataaactgccccttctcacaacatgggcgt
tgtgagcggcctcactgtttatacaaacatcctgcaaagcaggcgcgggactggtttgct
gtctcatttgaatcatccaaagtggacttcacagaaggacagaggccttatacgggctgt
ggagatgactgccttcatgagctggagcggatcaacaaggagattgaatctgtaaggcat
gaggtggagcaagagcggaggcgactgtcacgctaccagactgtacaggcagaccgcata
aacaacacgcctgcttccaagcgtgagtctgggagtaaaactgtagacagaaaagcttat
gggccatcgtctcgcacagattttactaaagcacaccagcgaggaaagaagtatgtggtt
gacaactcaaaaccgaggactgatttggagtatgacccactatccaacttctctgcagac
ttgctctctctcagctcattgacaaaggagcagaagttgaaaagtagacaagtaaaagac
aaaagtccagaaagcactgccccatgtattgataaagaaccatttgcgtatcaggcaccg
ctttcccgatcaccatctccggagccacttgatgtctcttctgaaggtgaagacctaatt
attgatgttcctccttctcctgagaaaacgggtcagagaactgctaagtctgtagcaggt
aaatcctctcaggtgacagcagtggaggtaaagggggggaaaaaagagcctaatttacct
aattctccatcaccacacaataaaatcactctgtcttcatcagattcaaataaaattcat
cattattctgttgaaaacagtcaagacttactgactataagtcctgccaaagagtctgaa
gatctaaaaaatggtgccaatgtagtggacttaacagatagtccagacgaccttgcaaat
gaatgtcaaaaaattactaaagcagtattggagaagatccccaaacaacaagatcacaac
ctgaacaatcctcagtgtgagctgcccagtatctttgagaaaatgaatccgcagaagacg
cccatgaatttacttttttgtaaatctccagctgctaactcatcacgcaggcaagtgcct
caggacagagttcaaagtcacaggtgttctgagaaaagtacaccctcagcggtgatggga
aaccagaaaaagtcaagcaaaatgtcaggacagacacagggaatagctgctgacggtgat
aagttgcctctagagcaagcagaacaagggtcagagaacagtgagtttgagggtcggcat
gttttgtcaacctatgtcagctcacaattcggagccgaaccgtgttctgagcagaatttg
gtgatggtaaatgatgaagaggtcatactaatcaactccagctctgatgaggaggaggaa
gggcccaaccattcagcagtggagctctcagacagcgacccaatggaggaatgctacagg
atcttcatggaggcaaacaatgagggaaaaggaactgaagagactcctagtgcatgttta
ggggctgtggatgcagagaagatggaggtaaatgtcacatccaagggattaccaggaagg
aaaagagtggctcatgaagccaaacaaacagagcagccagtagctaagagcaggcctcag
ccgcaggttttggttccactctgtgagccagtaacttcaggatttggctctagatcctct
gtcagttccaaaacccagcaggttcagcagagagcttccactctgactgcctcagttaaa
ggtgggcaggcttttgtttcctccacctctcagaagaaaccagagacccagttttcacct
tctgttttaactcaaaaccctgaaaccctgcagcccgctcctgtgcgcaatgcttttgtg
aactatatacctttgggaccagctgttattgaagtgggcaacaacttgcatttgatcctt
ccagacggtgccttccctgtgcccatttcttccaattccaatccagttactccagtttta
actccaataaatcaggttcacacaagggcccttgctatcaaacaaacataccatccacat
gcagttactcctatgcatcctatgcagcgatgccgcctgacagcaccaatgctcattcct
gctgttgcacgcagacctttactaaactctacttttacatctgcatctttacgttcaagt
tcaactatttctactgttcctcaaagttctggtcaagcttctgcaaagccgttgcctgct
aaacgaaaactgaagcagcagtgtgaggctgccaaagacaaagtgccccatgatgtcaga
cagcggtatgtcaacatgttcacagaggagttcctcaaaacgacacccaatgttaatgat
gcctttgaaaaggctcttgctgaagagaagacggtgtacaatcggagtgcgaacaagctc
aaatatatgagtgttgcagtgaatgcactcaagaggctgaagagtcaaagcactgttgct
actaaagatgaaagcaaagtctacagtcaaaaactgaaagggaacatacctcttaactca
acaaagtttaaaggaaactatgacatggcattgtatgagagtctgaaggattatattttg
actgatgaaaagctaattgagagcaactatcccgttcaacacccagagaaacgtggttct
gctgttgtttttgctgacaggaaagttaatgcagatgcactgaagaggatctgctgtcgc
tgtggtgctacatactctgtgagtcaaagtggcaaacacgttcgcaaggaggaatgcaac
taccattatgggaaaggagttgagaatagagtgcctggtggagtagaaactcgctacagc
tgctgtcagggagtcatgggagcccctggatgtcaagtgtttaagttacatgtccatgat
gccctcagcctggatgggtttgtgtctaccgtcccccggggtccctcagacaggagctgt
cctggtgtctattccttggattgtgaaatgtgttacaccattcatggtttggagttatcc
agagtgacagtggtcaactcgagtctggaagttgtatacgacacctttgttaaacctgaa
aatgaggtcattgactataacaccagattttcaggtgttagtgaggaggatatgaaggat
caccatgcttctctaagagatgtccaggagaccttgttgagcttcataaatgctgacacc
attctgattggacactgcctggaaacagacctctgtttactcaagctgctccacgggatg
gtggtggatacatcagtagtctttccccaccgtctgggcccccctcacaaactgaccctg
aacaagctcacagctgaatacctcagaaggatcattcaagagagtgtttgtggtcatgac
actgcagaagatgctactgcctgtatggagctgatgctgtggaaagtgaaagaagatgga
aaattgaaaaaatga
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