Oreochromis niloticus (Nile tilapia): 100705892
Help
Entry
100705892 CDS
T06104
Name
(RefSeq) hamartin isoform X1
KO
K07206
tuberous sclerosis 1
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04140
Autophagy - animal
onl04150
mTOR signaling pathway
onl04218
Cellular senescence
onl04910
Insulin signaling pathway
onl05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
100705892
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100705892
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hamartin
PKcGMP_CC
Motif
Other DBs
NCBI-GeneID:
100705892
NCBI-ProteinID:
XP_005460166
LinkDB
All DBs
Position
LG12:complement(37732010..37748972)
Genome browser
AA seq
1020 aa
AA seq
DB search
MSREQASISELLLSLDSSELQEAERVRAAVNQQLSTDKGGAVLSSVVEYYLDSSSSQALL
LLSSIREPHHKVLLEKLNESVSRSGTRLGALTLLGHMIRKQLPWVHHISRSPLLLSLLRC
LKTDSDVVVLITGVLVLVTLLPMIPQAGKQHINDFFDVFGRLASRSCRNPGHEPVAHLVH
LHAGTYSLFHRLYGMFPCSFISYLRLHYSMKENLDTFQEVIKPMLEHVRVHPELITGTQD
YELDPSRWRCYEVHDIVIECSRVSLDPLESSCEEDVYCSSSSLITPLPLTVLPHLDLTCS
PPVTDAVSSSGSSVCPSGSRCVPQLNPTATCTQPDDVTWSPTIHCGLSTPPSERTALGST
HPLSRSTSISGEKLPSSASILEAPPTKDPDCSQVRTVKDGEGSTCQPITEGEERGLSDLV
NNNREDVKDESQQPLPRLLTSTPTQASGVPLPPSFTTPHPRFEEPGSALSDYSPSSPYDP
LFELALPRAAMLFVGKTTQEVLEKKGGGPQRENREEEVTSVSPLKVLDQLIARGNDAHDC
LSRRLSAGSKSVDRSHFGGKQQSMKSKGSTQEEELQSLTNQLLLVHAQLQYERFKRQQHA
IRNRRLLRRVINTTALEEQSAAMKSQLGVQDEEIRSLRASLDEEQRRYSELQRETHTRSE
QLHTHIAHLLQLQRDEQRESQRLQGELQECQSGLQDLEAELQKANYRAYNAEHQLTQLSL
KLCSSEQLHQQMFLLNQQLVLLGETNKALQQQLEGGETQRCTEASMLQCSVGKEFLRLKD
NDVQQRQKLEAANHRITELESQLARKDQLILSQKKLLEDTKNQNRAELSASESRCAALRR
VTQALQTEMLQLYGQIAGGGAHPDGEPRDISRSDGGALPDAQGSQKSLPPSSSAVGIMNG
AVEVLSTSPVSLSLSPIDSPLAVGSFLEQRARQLFRPTDQNQEAEVGGKEEEEEEVNIQP
ASPPLGQEVEEATLLVGSPQTEPLSRAADPVVAPVDLTLTVQQRRHELSIMDYDETLPDI
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgtccagggagcaggcgagcatcagcgagctcctgctctcactggacagttcagagctg
caggaggcggagcgagtgagagccgcagtcaaccagcagctgagtacagacaaagggggc
gctgtcctctcctctgtggtggagtactacctggactcgtcatcttctcaggccctgctc
ctcctctcctccatcagggagccgcatcacaaagtgctactggagaagctcaacgagtct
gtgagtcgatccgggaccaggctgggcgccctcaccctgctgggtcacatgatcaggaaa
cagctgccgtgggttcatcacatcagccgctcgccgctgctgctctcactgctgcgctgc
ctcaagacggacagcgatgtggtcgtgcttatcacgggagtcttggtcctggtcactctg
ttacccatgattcctcaggctgggaagcagcacatcaacgacttcttcgacgtgtttggg
cgccttgcatcccgcagctgcagaaacccaggtcatgagcccgtggcccacctggtgcac
ctccatgccggtacgtactcgctgttccaccgcctgtatgggatgttcccctgtagcttc
atctcctacctgcggctgcactacagcatgaaggagaacctggacaccttccaggaggtg
atcaagccgatgttggaacacgtccgggttcacccagagctcattacaggcactcaggac
tacgaactggacccgtccaggtggaggtgttacgaagtccatgacattgtgatcgagtgc
tccagagtgtccctggatcctctggagtcttcgtgcgaggaggacgtttactgctcgtcc
tcctctttgatcacacctctccccctgactgtcctccctcacctggacctcacctgcagt
cctccggtcacagatgctgtcagcagctcaggaagttcagtctgtccttcgggatccaga
tgtgtgcctcagctgaacccgaccgccacctgcacgcagcctgacgacgtcacatggagc
cccaccatacactgtggtttgtccacacccccttctgaacgcactgctttaggctccacc
cacccactgagcaggagcacctccatctcaggtgagaaattgccttcatcagcctccatt
cttgaggctcctcccactaaggaccccgactgcagccaggtgaggacggtcaaagatggg
gaggggtcaacctgtcagccaatcactgagggggaggagcgaggcctgagtgacctcgtt
aacaacaacagagaagatgttaaagacgagtcccagcagcctttgccccgcctcctcacc
tccacccccactcaggcttcaggtgtccccctgcctccctccttcaccactcctcacccc
agatttgaagagccaggctccgccctctcggactacagccccagctctccgtatgacccg
ctgtttgagctcgctctgccccgggcggccatgctgttcgttgggaagacgacccaggag
gtgctggagaagaaggggggaggaccacagagggagaacagagaggaggaggtgacctct
gtctcccctctgaaggttttggaccagctgatcgcccgtggaaacgacgcccatgattgc
ctcagcaggaggttatcagccgggagtaagtcggtggatcggagtcactttggaggtaaa
cagcagagcatgaaaagcaaaggctccacccaggaggaggagcttcagtctctgaccaat
cagctgctgctcgtccacgctcagctccagtacgagcgcttcaagcggcaacagcatgcc
atccgaaaccgccggctgttgcggagggtcatcaacaccacagcgctggaggagcagagc
gctgccatgaagtctcagctcggcgttcaggacgaggagatccggagtctgagggcgagt
ctggacgaggagcagcgtcgatactcggagctgcagcgcgagacacacacacgcagcgag
cagctgcacacacacatcgcacatctgctgcagttgcaacgagatgagcagagagagagc
cagagactgcagggtgagctgcaggagtgccagagtggactgcaggatctggaggcggag
cttcagaaagccaattacagggcgtataatgctgagcaccagctgacccagctgtcactc
aagctgtgcagcagtgagcagctgcatcaacagatgttcctgctgaaccagcagctggtc
ctgctcggagagaccaacaaagctctgcagcaacagctggagggtggagagacacagcgc
tgcacggaggcgtccatgctgcagtgcagcgtgggtaaggagttcctgaggctgaaggac
aacgatgtccagcagagacagaagctggaagcagccaatcacaggatcactgagctggag
agccagctggccaggaaagaccagctgatcctgagccagaaaaaactgctggaggacacc
aagaaccagaacagggcggagctgtcggcatcggagagccgctgtgctgctctgaggaga
gttactcaggcgctgcagaccgagatgcttcagctgtacggtcagatcgcgggaggcggg
gctcacccagacggtgagccgcgggacatcagcagatccgacggcggagccttacctgat
gctcagggaagccaaaagtccctccccccgtcttcttctgctgttgggatcatgaacgga
gcagtggaggtcctttccacctcccccgtgtccctctcactctcccccatcgactccccg
ctggctgtcggctccttcctggagcaacgagcccgacagctgttcagacccacagatcag
aaccaggaggcggaggtcggggggaaggaggaggaggaggaggaggtgaatatccagcca
gcaagccctccactcggtcaggaggtggaggaggccacactccttgtaggaagtcctcag
actgagccgctgagccgagccgcagaccccgtcgtggcccccgtagacctgacactcacc
gtccaacagaggagacacgaactgagcatcatggactacgacgagacactgcccgacatc
tga
DBGET
integrated database retrieval system