Oreochromis niloticus (Nile tilapia): 100706029
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Entry
100706029 CDS
T06104
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 2 isoform X2
KO
K05046
solute carrier family 6 (neurotransmitter transporter, GABA) member 13
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
100706029
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
onl02000
]
100706029
Transporters [BR:
onl02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
100706029
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
100706029
NCBI-ProteinID:
XP_003448459
Ensembl:
ENSONIG00000004216
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Position
LG5:complement(16212499..16235591)
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AA seq
594 aa
AA seq
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MDNPHDPDVNFKLDIGTAQPEPTIHTRGQWSSKIEFLLAVAGQIIGLGNVWRFPYLCYKN
GGGVFFIPYILFLFACGIPLFLLETSLGQYTKQGGITCWKKICPLFEGLGYCSEVVVLYS
SIYYIIILAWAFLYLFSSFNSELPWASCKNSWNTETCVEFDGKADYFNMTVYENATSPVR
EFWERRVLNITGNIHEMGNIRWELALCLLLSWIICYFCVWKGVKSTGKVVYFTATFPYVM
LAVLLVRGLTLPGAIDGIKFYLYPDPSRLADPQVWMDAGTQIFYSYAICIGCLIALGSYN
KYNNDCYKDCVYLCLLNSGTSFVAGFAIFSALGFMAYEQNTDISKVAESGPGLAFIAYPR
AVAMMPFPQLWAVFFFVMIILLGLDSEFVGLEALTTAISDMNPAFFQVGHRRKLLLLAVS
VVSFFIGLVMVTEGGLYIFQVFDYYACSGMTLLLIAILQSVGVGWVYGADRFYDNVEDMI
GYKPLPLIKYCLKYVTPVICTGTFIFSLVKYTPLKFNNTLEYPWWGYALGWWFTLSSTLM
VPFWMLYNLSITPGTLRQRLSILCTPAEDLPLTKSEKRALELLDLPTSLDNTVS
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggataacccccatgatccagatgtcaacttcaagctggatataggcacagcccaacct
gaacccaccatccatacgagaggacagtggtctagcaaaattgagttcctcttggctgtt
gctggacagatcatagggctaggaaatgtctggcggtttccttacctatgctacaaaaat
ggaggaggggtgttcttcatcccatacatactcttcctcttcgcctgcggcatacccttg
tttctgctggagacgtctcttggccagtacacaaagcagggagggattacctgctggaag
aaaatttgccccctttttgaaggccttggttattgcagtgaagtggttgttttatactcc
agtatttattacattatcatattagcctgggcattcctatatctcttctcctctttcaac
tctgagcttccctgggcaagctgcaaaaacagctggaacactgaaacctgtgtggaattt
gacggaaaggctgattacttcaacatgactgtatatgaaaacgcaacttcgccagtgaga
gagttttgggagcgaagagttttgaatataactggaaacatccatgagatgggcaatatt
cgatgggagttggctttgtgccttttgttgtcatggatcatctgttacttttgtgtgtgg
aaaggtgtcaagtctactgggaaggtagtttattttactgccacatttccatatgtgatg
ctggcggtgttgcttgttcgtggactcacgttgcctggggccatagatgggatcaagttt
tacctgtacccagatccatcccgtctcgctgatccccaggtatggatggatgctggcaca
caaatattttattcctatgctatttgcattgggtgcctaattgcacttggcagctataat
aagtacaacaatgactgctacaaggattgtgtgtatttgtgccttctgaacagtgggacc
agctttgttgctggctttgccatattctctgcacttggattcatggcatatgagcagaac
acagatatatccaaagtggcagagtcaggtcctggcttggcattcattgcctatcctcga
gctgtcgccatgatgccttttcctcagctctgggcagtattttttttcgttatgatcatc
ttgctggggctggacagtgagtttgtgggtctggaagctctcacaacagccatttccgac
atgaatccagccttcttccaagtcggccaccgacgtaaactcttgctgcttgctgtcagt
gttgtcagtttctttatcggccttgtgatggttacagagggtggactgtacatcttccag
gtgtttgattactatgcctgcagtggaatgactttacttctcattgccatactgcagtct
gtaggtgttggatgggtatatggtgcggaccgattttatgacaacgtagaggacatgatt
ggatacaagcctttacccctgataaagtactgtttgaaatatgtcactccagtaatttgc
acgggaacatttattttctccttggtcaaatacactccactgaagttcaacaacacacta
gagtatccatggtggggttatgctctaggctggtggtttacactctcctctacgctcatg
gttcccttctggatgctgtacaatctgagcatcactcccggtacactgcgacagaggttg
tccatcttatgtactccagccgaagatctccctctgaccaaatcagagaaaagggctctt
gaactgcttgacttgccaacatccttggataacacagtgtcctag
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