Oreochromis niloticus (Nile tilapia): 100706192
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Entry
100706192 CDS
T06104
Symbol
irf7
Name
(RefSeq) interferon regulatory factor 7
KO
K09447
interferon regulatory factor 7
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04620
Toll-like receptor signaling pathway
onl04621
NOD-like receptor signaling pathway
onl04622
RIG-I-like receptor signaling pathway
onl04623
Cytosolic DNA-sensing pathway
onl05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
100706192 (irf7)
04621 NOD-like receptor signaling pathway
100706192 (irf7)
04622 RIG-I-like receptor signaling pathway
100706192 (irf7)
04623 Cytosolic DNA-sensing pathway
100706192 (irf7)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
100706192 (irf7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
onl03000
]
100706192 (irf7)
Transcription factors [BR:
onl03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
100706192 (irf7)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF-3
IRF
FAM171A1-2-B_N
PMBR
Motif
Other DBs
NCBI-GeneID:
100706192
NCBI-ProteinID:
XP_003440542
Ensembl:
ENSONIG00000014571
UniProt:
A0A669F082
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All DBs
Position
LG7:58809668..58815016
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AA seq
455 aa
AA seq
DB search
MLEDVFGKFRPTALQRIGEMQSLPKPQFSSWLLKQVETGQYAGLCYVEPNKFRVPWKHNS
RKDCSDEDSKIFRAWAVASGKINEFPNDKARWKTNFRCALNNLSVRFKMVKDNSKNSDDP
HKVYEIINTAQNQDGLATRDPWEDADIIPDIYSSSTEYLLSANEHDLVNDLMALGLGSQS
TEEQPWTENYGQQNQPATESYPVAAENNPQLLPVQQICYGVTPAPVLTSPQPGLFDLEVS
IHYRKKEMVKMTLNTPRLQLHYNSEALGYEAFKLCFPSTDGLLDHKQIEYTNRILNSIQR
GLFLEVQETGIYAWRQDRCHVFASTSDPSLANAEPAKLPQNTMVELLNFEKFVNELKQFK
ENNGRSPEYTITMCFGEKFPDGKPLEKKLIVVKVVPLICRHLHEMAQMEGASSLYSSNVS
LQISHNSLYDLISSCFPLQTAEDPMRDAALFPNQI
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgttagaagacgtgttcggaaaattcagaccgacggctttacagagaatcggtgaaatg
cagagcctccccaaacctcagttctccagctggctattaaagcaggtggaaacgggccag
tacgctggcctgtgctatgttgaaccaaacaagttcagagtcccgtggaagcacaactcc
agaaaagactgcagtgacgaggacagtaaaatcttccgggcctgggcagtagcaagtggg
aaaattaatgagttccctaatgacaaagccaggtggaaaaccaacttccgctgtgctctg
aacaacctctctgtgcgcttcaagatggtaaaagataactccaagaattctgatgaccca
cataaagtctatgagattatcaacactgcacaaaaccaagacggtctggcaacacgggac
ccttgggaggacgctgacattataccagatatatacagctcttccacagagtacctcctt
tcagcaaatgagcatgatctggttaacgatttgatggccttgggtcttggcagccagtca
acagaggagcaaccatggacagagaactatggccagcaaaatcaacccgcaactgaaagc
tatcctgtagcagccgaaaacaacccacagcttttaccagtgcagcaaatctgttatgga
gtaactcctgcaccagtactcacttcacctcagccggggctatttgacctagaggtctcc
atccactacaggaaaaaagaaatggtaaagatgactttgaacactccccgactgcagctc
cactacaactcagaggcacttgggtatgaggcattcaaactctgcttcccctccactgat
ggtctgctggaccacaaacagattgaatacaccaaccgcatacttaatagcatccagaga
ggtctattcttggaagtgcaagaaactggtatttatgcctggaggcaggacagatgccat
gtgtttgccagcaccagtgaccctagtttggctaatgcagagccagcaaagcttccccaa
aacaccatggtggagctccttaattttgaaaagtttgtgaatgaattgaaacagtttaag
gagaacaatggtagatctcctgaatacaccatcaccatgtgctttggagagaagtttcca
gatggaaaaccgctggagaagaagcttattgtagtgaaggtggtacctttaatctgtcga
catcttcatgagatggcccaaatggagggagcgtcgtctctttacagctccaacgtgagc
ctacagatctcacacaacagcctctatgatctcatcagctcctgctttcccctgcaaaca
gccgaagacccgatgcgggacgctgcactgttcccgaaccagatttga
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