Oreochromis niloticus (Nile tilapia): 100706221
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Entry
100706221 CDS
T06104
Symbol
prdm1
Name
(RefSeq) PR domain zinc finger protein 1 isoform X1
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
onl03000
]
100706221 (prdm1)
Transcription factors [BR:
onl03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
100706221 (prdm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
C2CH-3rd_BIRD-IDD
Zf-C2H2_ZNF451_C
zf-C2H2_6
zf-C2H2_jaz
zf-met
zf-C2HE
FOG1-like_PR
B129_C2H2-zf
Motif
Other DBs
NCBI-GeneID:
100706221
NCBI-ProteinID:
XP_005455220
Ensembl:
ENSONIG00000006687
UniProt:
I3JHV2
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All DBs
Position
LG11:complement(30796593..30821279)
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AA seq
848 aa
AA seq
DB search
MCGWDQSYTATSHSSAMLTSEGAHTMEQDDARHGAKMASSATSTGSGGAGTMTDTDVDME
EADMTQWTEAEFEEKCTYIVKDTACEVGPDGDAMMMSTTRAEASLPRNLAFKHLAGSKEV
AGVCSREYIPKGTRFGPLVGEIYTADSVPKDANRKYFWRIYVDGEFHHFVDGLDETRSNW
MRYVNPAHSAAEQNLAACQNGMEIYFYTVKPVPAGAELLVWYCHDFARRLHYPPSGELMM
QKLKQSILEVKQQQVSNEEHVQETSSPSPVAVTPTPPKKEHSVLSILRGTSSSSSTKREP
NRPLPTRPRCADSPDRLLYPRALYPPLRPHPQISEDFLNHKAARLAYPSTHSPGNQSSAT
PSPSARSSPESSPHGSPSGAAPSPASFYPTGLGTYPGYSPPSAPLSSPFYPPGAPYSRYL
MPHHYPLPGGGIPTVGAIFPRMYPLYSNLLPHHVPLLPSETGRRFLIPDPVHPSSISGHR
DFLLPGPTSAFSAATSLRDTTGPHSTYPRHPHSHGSAHAPSSGSPTAGTAPPSEQVPTKP
TSALLGNTSERCPDDEAINLTKVKRGAGSAGYKALPYPLKKQNGKIKYECNVCSKTFGQL
SNLKVHLRVHSGERPFKCQTCSKGFTQLAHLQKHYLVHTGEKPHECQVCHKRFSSTSNLK
THLRLHSGEKPYHCKLCPAKFTQFVHLKLHKRLHSRERPHKCPHCHRHYIHLCSLRLHLK
GYCLAASSSSGSPAISSQIALEEVHRANEEIERFDVSEHAERLEQLQGGVEMEAMLEKQV
LGMLWRETDIKSSHFHPHHKSNATELRSAGYGAYESPNETSVIKMRHSSPIPPLPANITV
KQESEDHA
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgtgtggatgggaccagagttatacagcgacctctcatagctcggccatgttgaccagt
gagggggcgcacaccatggagcaggacgacgcacgccacggagccaagatggcttcctct
gcaaccagcacaggctcaggtggagcgggcacgatgacagataccgacgtcgacatggag
gaagcagacatgacacagtggacagaggcagagtttgaggagaagtgcacgtatattgtc
aaagacacggcatgtgaggtgggcccagacggtgatgccatgatgatgtcgacgaccaga
gccgaggcttcgctaccccgtaacttggccttcaaacacctggctggcagcaaggaggtg
gctggcgtgtgcagcagggagtacatccccaaaggaactcgcttcggtcccctggtgggc
gagatctacacggctgacagcgtccccaaagacgccaaccgcaaatacttttggaggatt
tatgtcgatggggagtttcatcactttgtcgatggcctggatgagactcgctccaactgg
atgcggtatgtgaacccggcccactcggcagcagagcagaacctggcggcgtgtcagaat
ggcatggagatttacttctatactgtgaagcctgtcccagctggtgccgagctgcttgtc
tggtactgccacgactttgcccgacgcctgcactacccaccgtctggggagctgatgatg
cagaaacttaagcagtctattttggaggtaaagcagcagcaggtgagcaatgaggagcat
gtgcaagaaacatccagcccgtcccctgtcgcagtgacccccaccccaccaaagaaagaa
cacagtgtcctttccattttgcgtggcacctcatcttcgtcgtccacaaagagggagccc
aaccggccgcttcccacacgtccacgctgtgccgacagccccgatcgtctcctatacccc
cgtgccctctacccacctctcaggccccaccctcaaatatctgaggacttcctcaatcac
aaagctgcccgccttgcttacccttcaactcactcgcctggcaaccagtcctcagccaca
cctagcccatcagcaaggagcagcccagagagcagccctcacgggagcccctctggtgca
gcaccatcgcctgcttctttctatcccaccggactgggaacctatcctggttattcccca
ccatctgcccccctctcctctcccttctaccctccaggggccccttactcacgttacctt
atgccccatcactatcctctccctggtggtggcatccctactgtaggagcaatctttccc
aggatgtatcccctctacagcaacctcctgccccatcatgtacccctcctgccttctgaa
acagggaggcgcttccttatccctgaccctgtgcatccctcctccatttctggccacaga
gacttcctccttccagggcccacaagtgccttctcagctgctacttctctgagagacaca
acaggtcctcacagcacttatcccaggcaccctcactctcatggttcagcccacgctccc
tccagcggctccccgactgcaggcacagcacctcccagtgagcaggtgcccactaagcct
acctcagccctgctgggcaacaccagtgagcgttgtcccgatgatgaggcaattaacctg
accaaggtgaagcgtggtgcaggctcagcaggctacaaggcactgccttaccctctgaag
aagcagaatggcaaaatcaaatacgagtgcaacgtgtgcagcaagaccttcggacagctg
tcaaacctgaaggttcatcttcgcgtccacagtggggagagacctttcaaatgtcaaacc
tgtagcaaaggcttcacccagctggctcacctgcagaaacactacctggtccacactggg
gagaagccacatgaatgtcaggtttgtcacaagcgcttcagcagcaccagcaacctgaaa
actcacttgcgccttcactcaggggagaagccctaccactgcaaactctgtcctgctaag
ttcacccagtttgtccaccttaagctgcacaagcgcctgcactcccgcgagcgtccacac
aaatgcccccactgccatcgccactacatccacctgtgtagcctgcgacttcacctgaag
ggctattgtttggctgcaagctccagctctggaagcccagccatttcaagccagattgcc
ttggaggaagtgcaccgcgccaatgaggagattgagcgctttgacgtcagcgaacacgct
gagcgactggagcagttgcagggaggggtggagatggaagccatgttggagaagcaggtt
ttggggatgctgtggagggagactgacattaagtcctcccacttccatccccaccacaag
agtaacgccactgagcttcggtctgcaggttatggtgcgtacgagtccccaaacgagacg
tcggtcatcaagatgcggcacagcagtcccatccccccacttcctgctaacataactgtc
aagcaggaatcagaggatcacgcttaa
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