Oreochromis niloticus (Nile tilapia): 100706363
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Entry
100706363 CDS
T06104
Name
(RefSeq) probable E3 ubiquitin-protein ligase bre1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
100706363
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
onl04121
]
100706363
Enzymes [BR:
onl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100706363
Ubiquitin system [BR:
onl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100706363
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-RING_5
DZR_2
zf-C3HC4_4
Strabismus
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
100706363
NCBI-ProteinID:
XP_025763118
LinkDB
All DBs
Position
LG5:23994749..24008490
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AA seq
482 aa
AA seq
DB search
MNWEEPMETYDLNQEHVKPRKRSKAGSAAEEETCSCSVPVGHFWYVNHMYKEEMKRIEKE
NGVKIEAELKLKFQVDKKHGSPDNALKEFENLMQNSITESSGSVIPLKFIDPDQWRDALK
TIQKSKKKLLVTLTCETMTVQGPRHSQDVISKSLFADTVQHTNTRAFLEEYEKKNLDTSL
KTDRTTKDLWPMTTSCNKEVDRIKAGFNVEIKESDINQGKVSVKTLHKQDEGHSFMKDCS
LKSAFQPYRMTHHNLLMKTNCISQLEGASNDPVSNDQSANRMHNTDRPTDSGTTAGDQKD
ERCPICLDRFKNKKQLKCKDEFCEDCLRQAQDANGPICPVCRVVFGKIIGDQPDGRMSHQ
TLRTSLPGYSDCGTIVINYVIPSGIQTAKHPNPGQLYSGIHRTAYLPDNKEGNEVLQLLK
RAFQQRLIFTVGTSRTTGLDNQVTWNDIPHKTSTSGGPDRFGYPDPEYLSRVKEELKAKG
IE
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaactgggaagagcccatggagacttacgacttgaaccaagaacatgttaaaccacga
aaacggagtaaggcaggttctgcagctgaagaggagacgtgctcttgttctgtcccagtg
ggtcatttttggtatgtgaaccacatgtacaaggaagaaatgaaacgtattgagaaagag
aacggagttaaaattgaagcagagttaaagttgaaatttcaagtagacaaaaaacatggg
agcccagacaatgctctaaaagagtttgaaaacctcatgcagaacagtataactgaatcc
agtggctcagttattcctctcaagttcatagatccagatcagtggagagatgcgctgaaa
accatccagaaaagtaaaaagaaacttttggttactctgacctgtgaaacaatgactgtg
caaggaccaagacatagtcaagatgtcatcagtaagtcgttatttgcagatacagtgcag
catacaaacactcgtgcttttcttgaagagtatgagaaaaagaatctagacacatcactg
aagactgacaggaccaccaaagacttgtggccgatgactacctcttgcaacaaggaagta
gacaggatcaaagctgggtttaatgtggaaatcaaagaatcagacattaatcaaggaaaa
gtcagtgtgaaaactttacacaaacaagatgaaggacactccttcatgaaggactgcagt
ctcaaatctgctttccaaccataccgcatgactcaccataacttactgatgaagacaaac
tgcatttctcaattagagggggcctctaatgaccctgtgtcgaatgaccaatcagcaaac
aggatgcacaacactgaccgaccaactgacagtgggacaacagcaggtgaccaaaaggat
gaaaggtgtcctatatgtttggatagattcaaaaacaagaaacagctcaagtgtaaagat
gaattttgtgaagactgcctgagacaagcacaggacgcgaatgggcccatctgtcctgta
tgcagagtcgtctttggtaagataatcggagaccaaccagatggaagaatgtcacaccag
acattacgcacttcccttcctggatactcagactgtggcaccatagtgatcaactatgtg
attccaagtggaatacagacggcaaaacatcccaatcctggacagctctactcaggtatt
catagaacagcatatcttccagacaacaaagagggcaatgaagtgctgcaactgctgaaa
agagcatttcagcagaggctcatttttactgttgggacatccagaacaactggactggat
aaccaggtgacctggaatgacattccccacaaaacatccacgtcaggaggaccagatcgc
tttgggtatcctgaccctgagtacctgagcagagtcaaagaggagttaaaggccaaaggc
attgagtga
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