Oreochromis niloticus (Nile tilapia): 100706412
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Entry
100706412 CDS
T06104
Name
(RefSeq) interferon a3-like
KO
K05414
interferon alpha
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04060
Cytokine-cytokine receptor interaction
onl04217
Necroptosis
onl04620
Toll-like receptor signaling pathway
onl04621
NOD-like receptor signaling pathway
onl04622
RIG-I-like receptor signaling pathway
onl04623
Cytosolic DNA-sensing pathway
onl05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
100706412
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
100706412
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
100706412
04621 NOD-like receptor signaling pathway
100706412
04622 RIG-I-like receptor signaling pathway
100706412
04623 Cytosolic DNA-sensing pathway
100706412
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
100706412
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
onl04052
]
100706412
Cytokines and neuropeptides [BR:
onl04052
]
Cytokines
Interferons
100706412
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Gene cluster
GFIT
Motif
Pfam:
Interferon
DUF2158
Calmod_bind_M
Motif
Other DBs
NCBI-GeneID:
100706412
NCBI-ProteinID:
XP_019217788
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Position
LG8:6981015..6982022
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AA seq
186 aa
AA seq
DB search
MINRVFFACLFLGLVTAGSSLSCKWMDDKFKQHNEETLKLLDTMANNSTNITEVEVTVPF
PNHLYRQVSKSSDEDKLAFTVQVLEEVAALFEEDHSSASWEDSTVRNFLNIVNKQAEELH
SCIGSHSHKKKNSQLYFKTEMYFKRLSDDVLKKKGHSAEAWEVIRKETKAHLMRAEPLAS
SLHTVN
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgatcaacagggttttctttgcttgcctgtttctcggtctggtcactgcaggctcctcg
ttgagctgcaaatggatggatgataaattcaaacagcacaacgaagaaactctgaaacta
cttgataccatggctaataattccactaacatcactgaagtggaggtcaccgtgcccttc
cctaatcacttgtaccgccaggtgtccaaatcatcagatgaggataaactggctttcaca
gttcaggttctggaggaggtggctgccctgtttgaggaggatcacagctctgcatcatgg
gaggacagcacagtgaggaactttctcaatattgtcaacaaacaggctgaagagcttcac
tcctgtattgggagccacagtcacaagaagaagaactcacagctgtatttcaagacagaa
atgtatttcaaaaggctttcagatgatgtcctaaagaagaagggtcacagtgctgaagcc
tgggaggtgatcaggaaggaaaccaaagcccatctcatgagagcagaaccgctggcttca
tctctgcacactgtcaactaa
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