Oreochromis niloticus (Nile tilapia): 100706453
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Entry
100706453 CDS
T06104
Symbol
rag1
Name
(RefSeq) V(D)J recombination-activating protein 1
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04068
FoxO signaling pathway
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
100706453 (rag1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
onl04121
]
100706453 (rag1)
Enzymes [BR:
onl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100706453 (rag1)
Ubiquitin system [BR:
onl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100706453 (rag1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAG1
RAG1_imp_bd
zf-C3HC4_2
zf-C3HC4
zf-RING_10
zf-C3HC4_4
zf-RAG1
zf-RING_UBOX
zf-C3HC4_3
TRAF3_RING
zf-RING_2
U-box
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
100706453
NCBI-ProteinID:
XP_003440543
Ensembl:
ENSONIG00000014593
UniProt:
I3KB69
LinkDB
All DBs
Position
LG7:57745060..57752004
Genome browser
AA seq
1062 aa
AA seq
DB search
MAAESLETDGPRSSMPPELHHPHSEYSQWKFKLFRVKSMEKAPLPSETQHEISPTAPPNI
EIDHAVDPGSVMKLCLGGKSKENVEGPGRRVDVKLQEMETHMDHLRGLCRVCGMVLRKVK
GPVHDVHGDLDEVSKCALRKMGCKFPSWPEVILKVFKVDVTEDTESVHPLSFCHRCWMVA
IRGGGVCSFTRTRVPEWKPHSSLCHLCYPKKTSFQRTGRKRRKVIPRAQSLAKRTRWDCD
AIAVGERRVLRPFGDRHGPAIRAWKKFSIQREQWVRNITRCQKDHLSTKLLSEKLPVDFV
ASFTCLVCDHLLSDPVQSTCGHLFCRSCIVKFTHVLGPHCPACNSPCTPDNLTSPAKVFS
SALHSLPLLCPSEGCREQVRLDSFKAHCLSHELKEDENQSLSELDNFLLTNKGGRPRQHL
LSLTRRAQKHRLRDLKSQVKVFADKEEGGDLKSVCLTLFLLALRSGNEHRQADELEAMMQ
GRGFGLSPAVCLAIRVNTFLSCSQYHKMYRTVKATSGRQIFQPLHTLRAAEKELLPGFHQ
FEWQPALKNVSPSCNVGIINGLSGWSSSVDDVPADTITRRFRYDVALVSALKDLEEDIME
GLRESGMEDSACTSGFSVMIKECCDGMGDVSEKHGGGPVVPEKAVRFSFTVMSVSVLADD
EEEEVAIFTEPKPNSELSCKPLCLMFVDESDHETLTGVLAPIVAERNAMKESRLILSMGG
LPRSFRFHFRGTGYDEKMVREMEGLEASGSTYICTLCDSSRAEASQNMVLHSITRSHEEN
LERYEIWRTNPFSESVDELRDRVKGVSAKPFLETQPTLDALHCDIGNATEFYKIFQDEIG
EVYKKANPSREERRSWRAALDKQLRKKMKLKPVMRMNGNYARRLMTQEAVDVVCELVPSE
ERREALRELMKLYLQMKPVWRATCPAKECPDQLCRYSFNSQRFADLLSTTFKYRYNGKIT
NYLHKTLAHVPEIIERDGSIGAWASEGNESANKLFRRFRKMNARQSKTFELEDVLKHHWL
YTSKYLQKFMEAHKDSAKALQATIDPVEIQDDDEMSLEVPDF
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagaaagcctggagacagatggtcccagatcgtccatgccgccagagctccac
catccccactctgagtattctcagtggaagttcaaactcttcagggtgaagtccatggag
aaagcccctctgcccagtgaaacacagcatgagatttcaccaacggcacctccaaatata
gagatagatcatgctgtggatccagggagtgttatgaaattatgcctaggagggaaaagc
aaggaaaatgtggagggccctggcaggagagtagatgtgaagctacaggagatggaaacc
cacatggaccacctcaggggtttgtgtcgtgtctgtggaatggttctgaggaaagtcaaa
ggaccagtgcacgatgttcatggagatctggatgaggtgagcaagtgtgccttgcgtaaa
atgggctgcaagttcccaagctggccagaagtcatccttaaagtcttcaaagtggacgtg
acagaggacacagaatctgtccaccccctttccttttgccaccgctgctggatggttgcc
attcgaggtgggggagtctgcagcttcaccagaacaagagtgcctgagtggaaacctcac
tcttccctgtgccacctctgctaccccaaaaaaacatcattccagaggactggaaggaag
aggaggaaagtcattccaagagcacagagcctggcaaaaaggaccagatgggactgcgac
gccatcgctgttggtgagaggagagttctgagaccatttggagaccgtcatggtcctgct
atcagggcctggaagaagttcagcattcagagagagcagtgggtgaggaacattacacgc
tgccaaaaagatcacctgagcaccaagctgctctctgagaagctccctgtggactttgtt
gcatctttcacctgcctagtgtgtgaccacctgctctctgatccagttcagtccacctgt
gggcacctcttctgccgtagctgcattgtaaaatttacccacgttctaggacctcactgc
cctgcctgcaactcgccctgtacacccgataatctcacctcaccagccaaagtcttttca
tctgccctccattccctacctctgctctgccccagtgagggctgtcgtgagcaagtgagg
ctggactcatttaaggctcactgtctgagccacgagctgaaggaagatgaaaaccagagt
ctgtcagaacttgataacttcctactaaccaataaagggggaagacctcgccagcacttg
ctctcgctaacccgtcgtgcccagaagcatcgactgagggatctgaagagccaggtgaag
gtgtttgcagacaaagaggaaggtggtgatctgaagtctgtgtgtttgacgctgtttctg
cttgcactgagatctgggaatgaacaccgtcaggcagatgagctagaggccatgatgcaa
ggcagaggctttgggttgagtcctgctgtgtgcctggccattcgggtcaacacattcctg
agctgcagtcaatatcataagatgtatcggactgtcaaagccacaagtggccgccagatc
ttccagcccttgcacactcttcgagctgcagagaaggagcttctccctggttttcaccag
tttgaatggcagccagctctcaaaaacgtgtccccatcctgtaatgttggcattattaat
gggctctctggatggtcttcgtcggtggatgacgtcccagctgacactatcactcggcgc
tttcggtacgatgtggcacttgtgtctgccttaaaggatctggaggaggacatcatggag
gggctgagggagagtgggatggaagacagtgcctgcacatcaggttttagtgtcatgatc
aaggaatgttgcgatggcatgggtgatgtcagcgagaagcatggcgggggaccagttgtt
cctgagaaggctgttcgtttttctttcactgttatgtctgtctctgtcctggcagacgat
gaggaggaggaggttgctatttttaccgagccaaagccaaactcagaactgtcctgtaag
cctctttgtctgatgtttgtggatgagtcagaccatgagacactcacaggtgtcctggcg
cccatagttgcagaacgtaatgcaatgaaagaaagcaggcttatcctgtccatgggtggt
ctgcctcgatcctttcgcttccacttcaggggcacgggatatgatgagaagatggtgcgt
gagatggaggggctggaggcttctgggtccacgtacatctgcactctatgtgactccagt
cgtgcagaggcctctcaaaacatggtgctgcactccatcacccgcagtcacgaagagaac
ctagaacgctatgaaatatggagaaccaaccccttttctgagtcagtagacgagctgcgt
gacagagtcaaaggggtgtctgcaaagcctttcctggagacgcagccaacattagatgca
ttgcactgtgacatcggcaatgctactgaattctacaagatcttccaggatgagatcgga
gaggtgtacaaaaaggccaaccccagccgggaggaacggcgtagctggagggcggcctta
gataaacagctgaggaagaagatgaagcttaaaccagtaatgaggatgaatggaaactac
gcccgcagactaatgacccaggaggctgtggatgtggtgtgtgagctggtgccctcagaa
gagagaagagaggccctgagggagcttatgaaactctacctccaaatgaaacctgtgtgg
cgtgccacctgcccagccaaggaatgccctgaccagctatgccgctacagttttaactct
cagcgctttgctgacctcctctccactaccttcaaatataggtacaacggaaagataaca
aattatctgcacaagaccctagcccatgtacctgaaattatagagagagacggatccata
ggagcctgggcaagcgaggggaatgagtcagcaaacaagctgttcaggcgttttcgcaag
atgaatgcacgccagtctaagacctttgaactggaggacgtgctgaaacaccactggctg
tacacgtccaagtacttgcagaagtttatggaagctcacaaggactctgcgaaggctctg
caggctaccattgacccagtagagatccaggatgatgacgaaatgtctttggaagttcct
gatttttga
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