Oreochromis niloticus (Nile tilapia): 100706537
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Entry
100706537 CDS
T06104
Name
(RefSeq) ATP-dependent RNA helicase DDX39A
KO
K13182
ATP-dependent RNA helicase DDX39 [EC:
5.6.2.7
]
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
onl03041
]
100706537
Enzymes [BR:
onl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100706537
Spliceosome [BR:
onl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
100706537
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
100706537
NCBI-ProteinID:
XP_003443119
Ensembl:
ENSONIG00000036607
UniProt:
A0A669ERC1
LinkDB
All DBs
Position
LG4:8107001..8113537
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AA seq
427 aa
AA seq
DB search
MAENDVDNELLDYEEDEEPQGAPESATPAGKKEVKGSYVSIHSSGFRDFLLKPELLRAII
DCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQIEPVDGQVSVLVMCH
TRELAFQISKEYERFSKYMPTIKAAVFFGGLPIKKDEDVLKKNCPHIVVGTPGRILALIR
NKTLSLKNVKHFVLDECDKMLEQLDMRRDVQDIFRITPHEKQVMMFSATLSKEIRPVCRK
FMQDPMEVFVDDETKLTLHGLQQYYCKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCV
ALSQLLVEQNFPAIAIHRGMVQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFN
YDMPEDSDTYLHRVARAGRFGTKGLAITFVSDETDAKTLNDVQDRFEVNVAELPDEIDIS
SYIEQSR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggctgagaatgacgttgacaacgagctccttgattatgaagaggatgaggagcctcaa
ggagcccccgagagtgcaaccccagcaggcaagaaggaggtgaaaggttcctatgtttcc
atccacagctctggcttcagggattttcttctgaagccggagcttctccgggccatcatt
gactgtggttttgagcatccatctgaagtgcagcatgaatgcatcccacaagctatcctg
ggcatggacattctgtgccaagccaaatctggtatgggcaagacggctgtgtttgtgttg
gcgaccctgcaacagatcgaacccgttgacggacaggtgtctgtattagtcatgtgtcac
acacgagagctggccttccagatcagcaaagagtacgagcgtttctccaagtacatgccc
accataaaagcagcagtattctttggtggcctgcctatcaagaaagacgaggacgtcctg
aagaagaactgccctcacatcgttgtcggaactcccggccgtatcctcgccctgatccgg
aacaagacgctcagtctgaagaatgtcaagcattttgtcctggatgagtgtgacaaaatg
ctggagcagctagacatgaggcgtgacgttcaggacatcttccggatcacaccgcatgag
aagcaggtcatgatgttcagtgcaacactgagtaaggaaatccgaccagtgtgccgcaag
ttcatgcaagatcccatggaggtgtttgtggatgacgagaccaaacttacactccacggc
ctgcaacagtactactgcaagctgaaggacagcgagaaaaaccgcaagctatttgacctg
cttgatgtgttggagttcaatcaggtggtgatcttcgtcaagtcagttcagcgctgcgtc
gctctgtcccagctgctggtggagcaaaatttccctgccattgccatccacaggggaatg
gttcaggaggaaaggctgtctcgctatcagcaattcaaagacttccagcggcggatcctg
gtggccaccaacctttttggccgagggatggacattgagcgagtgaatatcgtcttcaac
tacgacatgccagaagattctgacacctatttgcacagggttgcccgtgctggtaggttt
gggaccaaaggcctggctataacctttgtgtcagacgagactgatgccaagactctgaac
gatgtgcaggaccgctttgaagtcaatgtggccgagctgccagatgagattgacatctca
tcttacatcgagcagtccagatga
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