Oreochromis niloticus (Nile tilapia): 100706626
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Entry
100706626 CDS
T06104
Symbol
chd2
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 2 isoform X1
KO
K20091
chromodomain-helicase-DNA-binding protein 2 [EC:5.6.2.-]
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
onl03036
]
100706626 (chd2)
Chromosome and associated proteins [BR:
onl03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
100706626 (chd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
Helicase_C
CHD1-like_C
Chromo
ResIII
HDA2-3
Motif
Other DBs
NCBI-GeneID:
100706626
NCBI-ProteinID:
XP_019217143
Ensembl:
ENSONIG00000015136
UniProt:
I3KD56
LinkDB
All DBs
Position
LG7:53504409..53532107
Genome browser
AA seq
1811 aa
AA seq
DB search
MMKSKSKKQEDEGSTQSNASSISASEESNHSASESGSQSESEHGSERRRSHNSESNSSSE
SESHSESESESAESKSQQTAAEVKDKPVRKKERLADVKKMWEEHPDVYGVRRSNRSRQEP
ARLNIGAGGSSESESESPKRKTSRAKKKENIWKDDDSNDEEEEEEASDSTDSEQEEKKVR
SRRLPARRPQGKSSAAKKQLSQKTRKSRKQESSAEEDDDDDDDDDDDEEDTPKRQTRRRG
ATKVKSYKEDQHDFETDSDDLIEMTGDACEEQQDDDSETIEKVMDARTGKKGATGACTTV
YAVEENGDPCEGFDPEKDEGETHYLIKWKGWSYIHNTWESMDSLTQQKVKGMKKLENFKK
KNDELNSWLRKASPEDIEFHNCQQELTSDLNKQFQIVERIIATKTGKTPGSSDFPSHSHK
TPSSNEPEFLCKWMGLPYSECSWEDGALVRKKFQHCIDSFMNRNSSKTVPSKDCKVLKQR
PRFVALKKQPSYIGDSNLELRDYQLDGLNWLAHSWCRCNSVILADEMGLGKTIQTISFLS
YLFHQHQLYGPFLLVVPLSTLTSWQREFDTWAPDMNVVVYLGDVMSRKIIRDYEWVNHQT
KRIRFSALLTTYEILLKDKGVLGNINWAFLGVDEAHRLKNDDSLLYKTLMEFRSNHRLLI
TGTPLQNSLKELWSLLHFLMPDKFDSWEDFEDEHGKGRENGYQSLHKVLEPFLLRRVKKD
VEKSLPAKVEQILRVEMSAQQKQFYKWILTRNYKALAKGTRGSSAGFLNIVMELKKCCNH
SFLIKQPEDGDAETQQEHLQALVRGSGKLVLLDKLLTRLRERGNRVLIFSQMVRMLDILA
EYLSKKRYPFQRLDGSIKGEIRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVI
FDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEDIIERAKKKMVLDHLVIQRMD
TTGRTVLDSNSGNTNSNPFNKEELTAILKFGAEDLFKEAEGEESEPQEMDIDEILRLAET
RESDQGSSATDELLSQFKVANFSSMEESTPEFEEKPIPEWDDIIPEEQRRKIEEEEKQRE
MEDIFMLPRSRSSNKRAQANDSDSDVGSKLKHRSSGSESETDDSDDDKKPKKRGRPRARK
NNVEGFTDAEIRRFIKAYKKFGCPLERLEAIARDSELVDKSIADLKRLGELIHSSCVTAV
QEHEEHLKENPVEAKGPGKRRGINIKISGVQVNAKSIIQHEEEFEPLHKVVPSNPAERNK
FKLTCRVKVAHFDVDWDLQDDIQLLLGIYEHGFGNWDLIKTDSDLKLADKILPDDPSKKP
QAKQLQARAEYLLKLLKKEQDSTDQAKTGEEVKVKKRKPRVKKENKILKDEQGNDISSPR
LSDNPSEEGEVKEDGTEKSTVKKRQKKKDNKENKEKQGTPKKEKDGDKDKKGAKPRKEKA
KGAKGKKTQGPVHITAGSEPIPIEEKEDDELDQETFSICKERMRPVKKALKQLDKPDEGL
SDQEQLQHTRTCLLKIGDRITECLKAYSDPEHVKIWRRNLWIFVSKFTEFGARKLHKLYK
MAQKKRSHEEEKEQKKKEDVSGRVKSFRPEPSGSSRDSTGTQPSSRPASHSTQPGPHGHH
REPYNANKRHFSNDDRGDWQRDRKYSYPGNSNSSWQGDRHHPYDPHRYKDHYSDRRPHGD
PYRSSGGYRNNSSPRKRPYEQYSNDRDHRGHRPYYDRHPDPKRRRPDDFRPNYHQGRDGP
LQDFRRMPDHRPAGPSGPDHYNRPFHPEKPPPLLDPRSPQAQKSPQDSRSPLERPGELNA
MADPNWNNRKT
NT seq
5436 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagagtaaaagtaaaaaacaagaggatgaaggatcgactcaaagcaatgcatca
agcatttcggcttcagaggaatccaaccactctgcgtcggagtcgggaagtcagtcagag
agcgaacatggcagtgaaaggaggagatcgcacaactccgagtcaaacagctcctcagag
tcagagagtcactcagagtcagagagcgaatctgcagagtccaagtcacagcaaaccgca
gcagaggtcaaagacaagccagttagaaagaaggagcgcctggctgatgtgaagaagatg
tgggaagaacatccagatgtgtacggtgtccggcggtccaatcggagcaggcaggagcca
gctcgattaaacattggagctgggggcagcagtgagtctgagagcgaaagccccaaaagg
aaaacctcccgggctaagaaaaaggaaaatatctggaaagatgatgactcaaatgatgaa
gaggaggaggaggaggcttccgacagtacagacagtgagcaggaagagaaaaaagttaga
tccagacgacttcctgctagaaggcctcagggtaaatcatcagcagccaaaaagcagctc
tctcagaagacgaggaagtcccggaaacaggagtcatcggcagaagaggacgacgatgat
gatgacgacgatgatgacgatgaggaagacactccaaagaggcagacgcgacgaaggggt
gccacaaaagtcaaaagttataaagaggaccaacatgactttgaaacggactccgatgac
ctcatcgaaatgacgggggatgcatgtgaggaacagcaggacgacgacagcgaaaccatc
gagaaagttatggacgccaggactggcaaaaaaggagccaccggggcttgcactaccgtg
tatgccgtggaggaaaatggggacccgtgcgaaggctttgaccccgagaaggatgaaggg
gagactcattacctgattaagtggaagggctggtcctacatccacaacacgtgggagagc
atggactctctgacacagcagaaggtcaaggggatgaagaaactggagaactttaagaag
aaaaatgatgaactaaactcatggttgaggaaggcgtcccctgaggacattgagtttcat
aactgccaacaagagctcacctctgacttgaacaagcagtttcagattgtggagcgtatc
atcgcaacaaaaacaggaaagacaccaggatcctctgacttcccctctcatagtcataag
actccatcctccaatgaaccagagttcctgtgcaagtggatgggtctgccctattccgag
tgcagctgggaagatggagctttggttagaaagaagtttcagcactgcatagacagcttc
atgaaccgaaactccagcaaaacagttccctctaaagactgcaaggtattaaagcaaagg
ccaagatttgttgctctgaagaagcagccgtcatatattggcgactccaaccttgaactg
agagattatcagctggatgggttgaactggctggctcactcctggtgcaggtgcaatagt
gttatcctcgctgatgagatggggctgggaaaaaccatccagacaatctccttcctgtct
tacctgtttcaccagcatcagctctatggtccctttttactggtggtgcctctgtccacg
ctcacttcctggcagcgggagttcgacacctgggcccccgacatgaatgtggtggtctac
cttggcgacgtcatgagcaggaaaataatccgtgattatgagtgggtgaaccatcaaacc
aaaagaatccgtttcagtgcactactaactacttatgagattctacttaaagacaagggg
gtgctcggaaacatcaactgggcgttcctgggcgttgatgaagctcacaggctgaagaat
gatgactccctactctacaaaacattaatggagttcaggtctaatcacaggctcctcatt
accggcacgccgctacagaactcgctcaaagagctctggtcactcttacacttcctcatg
cctgacaagtttgactcctgggaggattttgaggatgagcatgggaagggaagggaaaac
ggctatcagagtcttcacaaagtccttgagcctttcctgctccggcgtgtcaaaaaagat
gtggaaaaatcactcccagccaaggtggagcaaatcctccgtgtagaaatgtccgcacag
cagaagcaattttacaagtggattttaacgaggaattacaaagctcttgccaaaggcacc
cgaggcagctccgccggcttcctgaacatcgtaatggagcttaaaaagtgctgcaaccat
agtttcctcattaaacagcccgaggatggagacgctgaaacgcaacaggaacacctgcag
gctctggtgaggggcagtgggaagctggtactgttggacaagctgctgaccaggctcaga
gaaagaggcaacagggtcctaatcttctcccagatggtcaggatgttggacattctggct
gaatacctgtctaagaaacgatatccgtttcagcggctggacggctccataaagggagaa
atccgaaagcaagcacttgaccactttaacgcagaaggctcagaggacttctgcttcctt
ttatccaccagagctggaggtttaggtattaacttggcctcggcagacaccgtcgtcatc
tttgactctgactggaaccctcagaacgacctgcaggcgcaggcgagggctcacaggatt
ggtcaaaagaaacaggtgaatatataccgacttgtcacgaagggaacagtggaggaggac
atcatcgagagggcgaagaagaagatggttttggaccatcttgtcattcagagaatggac
accactggtcgaactgttctggacagcaactcaggaaacacaaattcaaacccattcaat
aaagaagaactgaccgctattctcaagtttggtgcagaagatcttttcaaagaggctgaa
ggcgaggagtctgaaccacaggaaatggacattgatgagattttgaggttggccgaaacc
agagaaagtgatcaaggctcaagtgctacagatgaacttctgtcacagtttaaggtggcc
aatttctccagtatggaagagagcactccagagtttgaggagaagcccattccagaatgg
gatgacataattcccgaggagcaacgtcgcaaaattgaagaggaggagaagcagcgggag
atggaggacatcttcatgctgcctcgaagcagaagctctaataagcgggctcaggccaat
gacagtgacagtgatgtgggctccaagctgaagcaccgttcatcaggctctgaaagtgag
actgatgatagcgatgatgacaagaagccaaagaagcgaggaaggccgagagctcgcaaa
aacaacgtggagggtttcactgatgcggagattcgcaggttcatcaaggcatacaagaag
tttggatgtccacttgaaaggttggaagccattgcccgagactctgaactggtggacaaa
tccatcgcagacctgaagaggctcggtgaactgattcattctagctgcgtgactgcagtg
caggagcacgaggagcaccttaaagagaacccagtcgaagctaaaggtcctgggaagcga
cgaggaattaatatcaagatctcaggagtgcaagtcaatgcaaagtccatcatccagcac
gaggaagagttcgagccgctgcacaaagtggtgccctccaacccggctgagagaaataag
tttaaactgacgtgcagagtgaaagtggctcactttgatgtagactgggatctgcaggat
gacattcagctcttgctcggcatctacgagcacggctttggcaactgggatctgatcaag
accgattctgaccttaaactcgccgataagattcttccagatgatccaagcaagaagcct
caggccaagcagctgcaggcgagggcagagtatcttctcaagctgcttaaaaaagaacaa
gacagcacagatcaggctaaaaccggggaggaggtcaaagtgaagaagaggaagccccgg
gtgaagaaggaaaacaagattcttaaagacgagcagggaaacgacatctcctccccccgc
ctgtcagacaacccgtcagaagagggcgaggtcaaggaggatggaacagaaaagtccact
gtgaagaagagacagaagaaaaaggacaacaaagagaacaaagaaaaacagggaactccc
aaaaaggaaaaagatggggacaaagataagaagggtgccaagcccagaaaagaaaaggct
aaaggagccaaagggaagaagactcaaggtccagttcatattacagctggatctgaacca
attcccattgaagaaaaggaggacgatgaacttgaccaggagactttcagtatttgtaag
gaacgcatgaggcctgtgaaaaaggccctaaagcagctggacaaaccagatgagggtcta
agcgaccaggagcagctccagcacacacgcacatgcctactgaagattggagaccgcatc
acagagtgccttaaagcttacagcgatcccgaacacgtcaaaatatggcgaagaaacctc
tggattttcgtgtccaagtttacagagtttggtgcgaggaagctacacaagctttacaaa
atggcacagaagaagcgatcgcacgaggaagagaaggagcagaagaagaaggaggacgtt
tcagggagagtaaagtcattcaggccagagccgtctggttccagtcgagactccacgggg
actcagccgtcctccagacctgcatcgcactccactcagccaggaccccacggacaccac
agagaaccgtacaatgctaacaagcggcactttagcaacgacgatcgaggggactggcag
agggaccgtaaatacagctacccaggtaacagcaactcatcatggcagggagatcggcat
catccctatgaccctcatcgctataaggaccactacagtgatcgacggccgcacggtgac
ccctatcgcagctcgggcggttaccgcaacaactcctctcctcgaaaaagaccatacgag
cagtacagcaacgaccgggaccacaggggtcaccgaccctactatgacaggcatccagac
cccaaaagaagacggcctgatgacttccgccctaactaccaccagggaagagacggtcct
cttcaggatttcaggaggatgccggaccacagacctgcaggtccttcagggccagatcat
tacaacaggccgttccaccctgaaaaacctcctccacttctagaccctcgttccccgcag
gctcagaagtcgccacaggactcccgctctccactggagaggcccggagagctgaatgcc
atggcagatccgaactggaacaacaggaaaacttaa
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integrated database retrieval system
