Oreochromis niloticus (Nile tilapia): 100706727
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Entry
100706727 CDS
T06104
Symbol
sec24c
Name
(RefSeq) protein transport protein Sec24C isoform X1
KO
K14007
protein transport protein SEC24
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
100706727 (sec24c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
onl04131
]
100706727 (sec24c)
Membrane trafficking [BR:
onl04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
100706727 (sec24c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
100706727
NCBI-ProteinID:
XP_005471501
Ensembl:
ENSONIG00000015853
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All DBs
Position
LG8:complement(10105824..10128595)
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AA seq
1254 aa
AA seq
DB search
MNVNQHTPMASPYGQPQPGYGQPGYAPLDGSYPAPYAPYNGPASAYQPGAPPQGYSPFTS
FPSKALAANPVSDLPSPLDLGPARGPPTSGPPPVSAPQQYNQYSQSQGSMQNGPPPPTQA
PPRPAVSQPYNQGAMNLSGPHPSYPQHYGPPSTMQQVTNQMTGMQITSGPPTAAGPGYAP
PHSSQPPVSTGYSAAAQASYTQAPPPVSSAPTQPPPPSGPAAPQQYYSGPPPSSQQPFNS
SLPPTSQQQQQFTSSVTPQPPPQQTLPPSSYSGPVPPQSQPPVPPVSQAQQSFPTPQPPF
SSAPPPVSQSSFATGPPPSAQGSFPPQGPPPSSQPGSFPPPGPPLTSAPFSQYPGPMPPQ
QQPPPSQPSPYHSGQHPPRPQMPPTSMAQSNHLPPGPQGPPGPPGPLQQPPSQPGMQTGY
PPQQNGAFGQVRGPQPGYSAPYPGQPNYGAPAPAPPAQKRLDPDAIPSPQASDMPAVQKP
RHRIDPDAIPSPIQVIEDDKAKTTEPFTTGVRGQAPPLVTTNFQVQDQGNASPRFIRCTA
YNMPCTADMAKQSQVPLAAVIKPLATLPPDEPPPLVVDHGESGPIRCNRCKAYMCPYMQF
IEGGRRFQCGFCSCVTEVPPHYFQHLDHTGKRVDCYDRAELSLGSYEFLATVDYCKNNKL
PQPPAFIFLIDVSYNAVKSGMVNIVCQELKTLLDCLPRENPEAESAVRVGFVTYNKVLHF
YNVKSSLAQPQMMVVSDVSDMFVPLLDGFLVNVNESRQVIESLLDQIPEMFADTRETETV
FGPVIQAGLEALKAADCAGKLFVFHTSLPIAEAPGKLKNREDKKLIGTDKEKSLFQPQVG
FYSSLAKECVAQGCCVDLFLFPNQYVDVATLGVVPVSTGGSVYKYTYFQAQSDQERFLND
LRRDVQKLVGFDAVMRVRTSTGIRATDFFGSFYMSNTTDVELAGLDCDKAITVEFKHDDK
LSEETGALMQCAVLYTSCSGQRRLRIHNMAVNCCSQLADLYRNCETDTIINYFSKYAFRG
ILSNPTKAVRETLVNQCAQILACYRKNCASPSSAGQLILPECMKLLPVYLNCVLKSDVLL
PGADVSLDDRAYLRQLISCMDVAETHVFFYPRLLPVMKLESGSLPVAVRDSEERLSKGGV
YLLETGLHLFLWVGASVQQELLLNIFGTPSFSQIDSNMTSLPVLDNPISQALRELIYSFR
AQRSRYMKLMVVKQEDRAELIFRHFLVEDKSASGGASYVDFLCHMHKEIRQLLS
NT seq
3765 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtaaaccagcacacgccaatggcctctccatatggccagccccagcctggttat
ggccagcctggttacgctcccctggatgggagctatccagcaccctacgcaccctacaat
ggccctgcgtcagcctatcagcctggggctccaccgcaaggttactctcctttcacaagc
tttccctctaaggctttggcagccaacccagtctctgacctcccctctcctcttgactta
ggtcctgccaggggtcctcctacctctggacccccgcctgtctcagcacctcagcagtac
aatcagtacagtcagagtcaagggagcatgcagaatggacccccacctcctacacaggca
ccacccagacctgctgtgtctcagccgtacaaccagggtgctatgaacctatcggggccg
cacccttcttatccccaacactatggacccccatccacaatgcagcaggttaccaaccag
atgacggggatgcagatcacctctggaccaccaaccgctgctgggccaggatatgctcca
cctcacagctcccagcctcccgtcagtactgggtactcggccgcagcccaggcctcctac
acccaagccccgccccccgtgtcctctgctcccacccagccgccacctcccagcggcccc
gcagctcctcagcaatattatagcggcccaccgccttcttctcaacagccattcaattcc
tctcttccccctacctctcagcagcagcagcagttcacctcttctgtaactccacagcct
cctcctcaacaaaccttacctccatcctcttactcgggtccggtgcctccacaaagtcaa
cctcctgttcccccagtgtcccaggcacagcagtccttccccacaccccagccccctttc
tcttcagcacctccacctgtcagtcagtcttcctttgctactggccccccaccttctgcc
caaggctcctttccacctcaaggcccccctcctagctctcagcctggttcttttcctcct
cctggcccccctctaacctcagcccccttttcccagtacccaggtcccatgccaccccag
cagcaaccccctccatctcagccatccccctatcactcagggcaacatcctcctagacct
caaatgcctcccacttccatggctcagagcaatcacctgcctccaggaccacagggccca
ccaggccctcctgggccactacagcagcctccatctcagcctgggatgcagacaggatac
cctcctcagcagaatggtgcttttgggcaggtaagaggccctcagcctgggtattcagcc
ccttaccctgggcaaccaaactatggagcgccagctcctgctccacctgcacagaaaaga
cttgacccagatgccattcctagcccgcaagcgtctgacatgccggctgtgcagaaaccg
agacatagaatagatccagacgctatcccaagcccaatccaggtaatagaggatgacaag
gctaaaactaccgagccattcaccacaggggtcaggggtcaagccccaccactggtcacc
accaacttccaggttcaagaccaagggaatgccagtcccaggtttattcgttgtacagcc
tacaacatgccttgcacagctgatatggcaaagcagtctcaggtgccattggctgctgtc
atcaagcccctcgccacgctgccacctgatgagccccctccactcgtggtggaccacggc
gagagcggtccgatccgctgcaatcgttgcaaggcctacatgtgtccgtacatgcagttc
atagagggaggtcgccgcttccagtgtggtttctgcagctgtgtcacagaggtgcctcca
cattacttccagcatctggaccacaccggtaagagggtggactgctacgacagggcggag
ctttcactgggcagttatgaattccttgcgactgttgactactgtaagaataacaagctc
cctcagcctccagccttcatcttccttattgatgtgtcctacaacgctgtgaagagtggc
atggtcaacattgtctgccaggaactcaagaccctactagactgcctgcccagggagaat
cccgaagcggaatctgcagtgcgagtgggttttgtcacctacaacaaggttttgcacttc
tacaacgtcaagtcgagcttggcccagccccagatgatggtggtgtcagacgtgtcagac
atgtttgtacccctgcttgacgggttcctggtgaatgtaaatgaaagcagacaagttatc
gagagtttgctggaccagatcccagagatgtttgcagacaccagggagacggagacggtg
tttggacccgtcatccaagcgggactggaggcactaaaggctgctgactgtgctgggaag
ctgtttgtgtttcacacctctttgcccatcgcggaggccccaggaaaactaaaaaacaga
gaagacaagaagctgattggaacagacaaggagaagtcgctatttcagcctcaggtgggt
ttctacagctctctggctaaggagtgtgtagcccagggctgttgtgtggatcttttcctc
ttccccaaccagtatgtggatgttgccacattaggtgtggttcccgtctccactggaggt
tcagtctataaatacacatacttccaggctcagtcggatcaggagcgattcctaaacgac
ctcagacgagacgttcagaaacttgttggatttgatgctgttatgagggtgcgaaccagc
acaggcatccgagcaacagacttcttcggctccttttatatgagtaacaccacagatgtg
gagctggcaggcctcgactgtgacaaggccatcactgttgagttcaaacacgatgacaag
ctcagcgaggagacgggggcgctcatgcagtgtgctgtgctgtacaccagctgcagcggc
cagaggcgtctccgcatccacaacatggccgtgaactgctgctctcagctggctgacctg
taccgcaactgtgagacagacacaatcatcaactacttctccaaatacgctttccgtggc
attctcagcaaccccactaaggcagtgagagaaactctggtgaaccagtgtgctcagatt
ctggcgtgctacaggaagaactgtgcaagtccctcatctgctggtcagttgattctccca
gagtgtatgaagttgctcccggtttatctgaactgcgtgctgaagagtgatgtgctgcta
cctggagccgacgtttcattggatgaccgagcttacctgagacagctgatcagctgcatg
gatgttgcagagactcacgtctttttctacccccgcctgctgccagtgatgaaattggaa
agcggttcgttgccggtggcagtgagggactcggaggagaggttgtcgaaaggaggagtt
tacctgctggagaccgggctccacctgttcctgtgggtgggcgccagcgttcagcaggag
ctgctgctcaacatctttggcacgccgagcttcagccagatcgactcaaacatgacaagt
ctgcctgttcttgacaaccccatctctcaggctctcagagagctcatttattctttcaga
gcacagcgatcacgatacatgaagctgatggtggtgaagcaggaagacagggccgagctg
atattcagacacttcctagtcgaggacaagagcgccagcgggggagcgtcatacgtagac
ttcctgtgtcacatgcacaaggagatccgccagctcctcagctag
DBGET
integrated database retrieval system
