Oreochromis niloticus (Nile tilapia): 100706917
Help
Entry
100706917 CDS
T06104
Symbol
ssrp1
Name
(RefSeq) FACT complex subunit SSRP1 isoform X1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
onl03000
]
100706917 (ssrp1)
03036 Chromosome and associated proteins [BR:
onl03036
]
100706917 (ssrp1)
Transcription factors [BR:
onl03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
100706917 (ssrp1)
Chromosome and associated proteins [BR:
onl03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
100706917 (ssrp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
POB3_N
HMG_box
HMG_WDHD1
HMG_box_2
SSRP1_C
FERM_C1_MyoVII
Motif
Other DBs
NCBI-GeneID:
100706917
NCBI-ProteinID:
XP_005467666
Ensembl:
ENSONIG00000005118
LinkDB
All DBs
Position
LG2:complement(22473706..22490379)
Genome browser
AA seq
706 aa
AA seq
DB search
MGDTLEFNEIYQEVKGSWNDGRLRFSKQNVVYKSSKTGKVDSIPASELNLAQWRRVCLGH
GIKLGTSTGHVYKYDGFRDTDFEKISEFFKANYKVELTEKDMCVKGWNWGTAKFSGPLLS
FEVNDNTAFEVPLSNVSQCATGKNEVTLEFHQNDDTEVSLMEVRFYVPPSQSDERQDPVE
AFAQNVLSKADVIQATGDAVCIFKELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV
LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKEEDISLTLNMSEEDVERRFE
GKLSKFMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGF
IYVHKPPVHLRFEEISCVNFARGTTTTRSFDFEIETKQGNQYTFSSIEREEYGKLFDFVN
AKKLNIKNRGFKEKKGMKGKIDEYSDSDDDQHDAYLERMKAEGKIREEGNDSDESDGESD
ESFNPGEEDEEIAEEYDSNASASDSSEGGEESEDESAKKKKAKKAKVVKEKKERKPRKEK
KQKDAGGPKRPMSAYMLWLNSSRERIKSENPGISVTEISKKAGEMWRQLSKDEKQEWEAK
AGEAKKQYDKAKKEYKESGGATSSPRKESKKSGAKKDDKKRKSAGADKDRERGGNDSFKS
REFIETSEESSSDSDHKSKSKRKKESDDEEEEEAVSTPASSEEESD
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgggagacacactggagttcaacgagatctaccaggaggttaaaggctcctggaatgat
ggacggctgcgtttcagcaagcagaatgtggtttataagagcagcaagacggggaaggtg
gatagcatccctgccagtgagctcaatttggcccagtggaggcgggtgtgcttaggccat
ggcatcaaacttggcaccagcacgggacatgtctacaaatatgatggcttcagggacacg
gactttgagaagatttcagagtttttcaaggccaactacaaggtggagctgacagagaag
gacatgtgtgtgaagggctggaactggggaacagccaagttttcagggccactgttatcc
ttcgaagtcaatgacaacacagcgtttgaggtcccactgtccaacgtttcccagtgtgcc
acagggaagaacgaagtcactctggagtttcaccagaatgacgacacagaagtctccctt
atggaggtccgattctacgtcccacccagtcagtctgatgaacggcaagatcctgtggag
gcatttgcccagaatgtgttatctaaggctgatgtgattcaggctacaggagacgctgtg
tgtatcttcaaagagctgcagtgtcttacacccagaggaagatatgacatccgtatctac
ccgacatttcttcacctgcacggtaaaacgttcgactacaagattccctacaccaccgtc
ctccgtcttttcctgctgccacacaaggatcagaggcagatgttctttgtgatcagtctg
gatcctcctatcaagcagggtcagacacgttatcactttctcattctgctcttctccaag
gaagaagatattagcctaaccctcaacatgagcgaagaagatgtggagcgtcgttttgag
ggtaaactcagtaagttcatgtcaggatctctttatgagatggtgagcagggtgatgaag
gccttggtcaaccgtaaaatcacagtacctggaaacttccaaggacactcaggagcccag
tgcatcacctgctcttacaaggcatcctcaggcctcctctatcctttggaaaggggtttc
atctacgtccacaagccccctgttcacttgcgctttgaagagatctcttgtgtcaacttt
gccagaggcaccaccacgacacgttcttttgactttgagattgagaccaagcaagggaac
cagtacacttttagcagcattgagagagaggagtacggcaaactatttgactttgttaat
gctaagaagctcaacatcaagaacagaggcttcaaagagaagaagggcatgaagggcaag
attgatgaatacagcgactcagatgatgaccaacacgatgcttacttggaaaggatgaag
gctgagggcaagatcagggaggagggcaatgacagcgacgaatcagatggtgaaagtgat
gagtctttcaaccctggagaggaagatgaagagattgcagaagagtatgacagcaatgcc
tcagcaagcgacagcagtgaaggaggagaggagagtgaagatgagagtgcaaagaagaaa
aaggccaagaaagccaaagtggtgaaggagaaaaaagaaagaaaaccacgaaaagagaag
aagcagaaggatgctggcggacccaagagaccaatgagtgcgtatatgctttggctcaac
tccagccgtgagcgaatcaagtcggagaaccccggcatctccgtcacagagatctctaag
aaggccggagagatgtggagacagctgagcaaagatgagaagcaggagtgggaagcaaag
gcaggcgaggcgaaaaaacagtacgataaagcaaagaaagaatacaaagagagcggtgga
gcaacttccagccccaggaaggagagtaaaaagtctggagccaaaaaggacgataagaaa
aggaagtctgccggtgcagacaaggacagagagcggggaggaaacgacagcttcaagagc
cgagagttcatcgagaccagcgaggagagttcatcagactctgaccacaagagcaagtcc
aagaggaagaaggaatcagacgatgaggaagaagaagaggcggtgtccacacctgcaagc
tccgaggaagagtctgactga
DBGET
integrated database retrieval system
