Oreochromis niloticus (Nile tilapia): 100706936
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Entry
100706936 CDS
T06104
Symbol
lrp5
Name
(RefSeq) low-density lipoprotein receptor-related protein 5 isoform X1
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04150
mTOR signaling pathway
onl04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
100706936 (lrp5)
04150 mTOR signaling pathway
100706936 (lrp5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
onl04131
]
100706936 (lrp5)
Membrane trafficking [BR:
onl04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
100706936 (lrp5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
DUF5050
Vgb_lyase
EGF_LRP2
SGL
cEGF
Insulin_TMD
EGF
Motif
Other DBs
NCBI-GeneID:
100706936
NCBI-ProteinID:
XP_005454311
Ensembl:
ENSONIG00000004121
UniProt:
A0A669C726
LinkDB
All DBs
Position
LG7:complement(39280249..39327657)
Genome browser
AA seq
1603 aa
AA seq
DB search
MQMGSEGESAIIVSDLEDAAAVDFLYSERLIFWTDVSEEAIKQTHWNQSSNSLKEALGTG
QTVVVSGLDSPDGLACDWLGKKLYWTDSETNRIEVANLDGTSRKVLFWMDLDQPRAIALN
PGQRYMYWTDWGEEPRIERAGMDGSNRKVIVNEDIYWPNGLTIDLVEQKLYWADAKLSFI
HRANLDGSARETVVEGTLTHPFALTLSEETLYWTDWQTRSIHACSKHSGDKTREILSGIY
SPMDIQVLEPYRQPDIQTPCSTDNGGCSHLCLLSPVEPFYSCACPTGVQLKPDRKTCKPG
AEQVLLLARRTDLRRISLDLPDFTDIVLQVDNIRHAIAIDYDPVEGYVYWTDDEVRAIRR
SSIDGSNATMLVTTEINHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILISENLE
EPRAIVLDPVNGYMYWTDWGEHPKIERANLDGTARLVLVNSSLGWPNGLAIDYTAGKLYW
GDAKTDKIEVISVDGSNRQTLLEDKLPHIFGFTLLGDHIYWTDWQRRSIERVHKTTAVRE
IIIDQLPDLMGLKATKVTETFGTNGCAGDNGGCSHLCFWRQQAVSCACPMGMELLSDLQT
CVVPEAFLLFTNRDNIRSISLGTNSNDVVIPVTGVKEASALDVYVYERRIYWTDIQAKTI
SRAYMNGSSVEHIIEFGLDYPEGMAVDWMGHNIYWADTGTNRIEVARLDGQYRQVLVCKD
LDNPRSLDNPRSLALDPANGYMYWTEWGGRPRIARAYMDGSTITTLVDKVGRANGLTIDY
VDHRLYWTDLDTCMIESTNMQGLQREIIVDDLPHPFGLTQYRDFIYWTDFNLRSIERADK
RSGYNRTVVLQGQLELMLDILVFHSSRQDGTNECTHNNGNCAHLCLATPAGAQCRCASHY
TLNPDGRNCSSPSSFLLFSQKASISRMVLGEQSPDIILPIHVMRNVRAVSYDPVERLVYW
LDGRQNIRRARDDGAMSSMIVSSTAQPVDNQLHDLSLDPYSRNIYWTCETTNTINVKRMD
GHTVGVVIKDDTDKPRAIVVNAEKGYMYFTTVQERSAKIEGASLDGTERESLFTTGLIRP
VALALDNKLGKLFWVDADLKRIESSDLTGANRIVLQDSNILQPMGLTVLGDHLYWIDRQQ
QMIERVDKLTGDGRTRIQGRISYLTSIHAVEEIDPQEFASHPCSRDNGGCSHICIAKGDG
TPRCSCPMHLVLLQDLLHCGEPPTCSTEQFTCSTGEIDCIPMAWRCDGFPECEDGSDEDN
CPICSAYQFRCDKGGCIDAQRRCNGELDCADHSDEQDCETICPPNQFRCGDNQCITKKQQ
CDNYSDCPDGSDELACEHVSPPSSGIPSTGPNTIGPVIAIILLVFIIGGAYFVCQRVVCR
RYKGPSGTFPHEYISGTPHVPLNFITPSGSQHGTYQGISCGKSMMSSVSLMGSSSSGAPL
YDRNHVTGASSSSSSSTKGAFYPQILNPPPSPATDRSLYNTEIFYSSNSPSTTRSYRPYN
PVRGTVPPTTPCSTDVCDSDYTPHHPPAGLGLSVGRWKGSGHGSHTKHKYYMDLNSDSDP
YPPPPTPRSQYMSAEESCPPSPSTERSYFHLCPPPPSPCTDSS
NT seq
4812 nt
NT seq
+upstream
nt +downstream
nt
atgcagatggggtccgagggggagtccgccatcatcgtgagtgacctggaagatgcagca
gctgtggacttcttgtattctgaacgtctgatattttggacggatgtcagtgaagaagcc
atcaaacagactcactggaatcagtcttctaactcccttaaagaggcactaggaacaggc
cagactgtggtagtatcagggttagacagtcctgatgggctggcctgtgactggttgggt
aaaaagctctactggacggactcagagaccaatcgcattgaagtggccaacctagatgga
acctcaagaaaggtgttgttctggatggacttggaccagcccagggcgatcgctctcaac
cctggccaacgctacatgtactggacagactggggggaggaacccaggatcgagcgtgct
ggcatggatggcagcaacaggaaagtaatagtgaatgaggacatttactggcccaacggt
ctcaccatagacctggtggaacagaagttgtactgggctgatgccaaactcagcttcatt
catagagccaatctggatggatcggcacgtgaaacagtggtggaaggcaccctgacccat
ccttttgccctgacattgtctgaggagacattatactggaccgactggcagactcgttcc
atccacgcctgtagcaaacacagtggagacaaaaccagagagatcctcagtgggatttac
tctcctatggacatacaggttctggagccctaccgccaaccagacatccagacaccatgc
agtaccgataatggaggctgcagtcacctctgcttactctctccagttgagcctttctat
agctgcgcctgccccactggcgtgcagcttaaaccagacagaaagacatgcaaaccagga
gcagagcaagttctgttgctggctcgacggacggaccttaggaggatctcactggacctg
ccagatttcacagacatagtactgcaggttgataacattcgccatgccatagctatagat
tatgacccagttgaaggttatgtctattggacggatgatgaggttcgggccattcgacga
tcgagcattgatggcagtaatgcaacgatgttggttaccacggagatcaaccacccagat
ggcattgctgtcgactgggttgccagaaacctgtactggactgacactggcactgatcgg
attgaggttaccaggctaaatggaacctctcggaaaattttgatttctgagaacttggaa
gaacccagagccattgttctggaccctgttaatggttacatgtactggactgactggggt
gagcatccgaagattgagcgagccaatctggatggaacagcccggctggtcttggtcaat
agctctctgggctggcccaatggactggctatagactatacagcaggaaaactttactgg
ggagatgccaaaacagataagatagaggtgatcagtgtggatggtagtaacagacagact
ctactagaggacaagctgcctcatatctttggttttactctattgggggatcatatctac
tggactgactggcagagacggagcattgagagggtccacaaaaccacagctgtacgagag
atcattatcgatcagctgccagatttaatggggctgaaggcaactaaagtgacagagacc
tttggtacaaacggctgtgctggtgataatggtggatgtagccatctgtgtttctggcgt
cagcaggctgtcagctgtgcctgtccaatggggatggagctcctgtcagacctccagacc
tgtgtggtgcccgaggccttcctgctcttcactaatagggacaacatcaggagtatttct
ttaggtaccaacagcaatgatgtggtcattcctgtgacaggagttaaagaggcctctgct
cttgatgtttacgtctatgaaagaagaatatattggacagacatacaggcaaagacaatc
agcagagcctacatgaatggcagctctgtagaacacattatagagtttggactggactac
ccagaaggcatggcagttgactggatgggtcacaacatttactgggcagatacaggcact
aaccgcattgaagtggcccggttggatggccagtaccgacaggttctggtctgtaaggat
cttgacaatcctcgatcattggacaacccacgatcactagcactggacccagccaatggc
tacatgtactggacagagtggggaggtcggccacgcatagccagagcctacatggatggc
agcaccatcacaacattggtggataaagtgggccgtgccaatggactgaccattgactat
gtagaccatcgtctctactggactgacctagacacatgcatgattgaaagcaccaacatg
caaggccttcagagagagatcatagtagacgacctgcctcatccctttggtctcacacag
taccgcgattttatctattggactgattttaacctgcgtagcattgaacgtgcagacaaa
cgcagcggatacaaccgtactgtggtgctgcagggccagcttgagctgatgctggacatc
ctggtcttccactcttctcgtcaggatggcactaatgagtgcacacacaacaacggcaac
tgtgcccacctctgcctggccactcctgctggtgcccagtgccggtgtgcctcccactac
accttgaacccagatggacgaaactgtagctctccttcaagtttcctgctcttcagtcaa
aaggctagcatcagcagaatggttttaggagagcagagtcccgacatcatccttcctatc
catgtaatgagaaatgttcgagctgtcagctatgacccggtggaacgactggtgtactgg
ctcgatgggcgacagaatatacgcagagccagagatgatggggccatgtcgtcaatgata
gtcagcagcactgctcaaccagtggacaaccagcttcatgacctgagcctggatccctat
agtcggaacatctactggacctgtgagacaaccaacaccatcaacgtcaagaggatggat
ggtcacactgtgggcgtggtcatcaaggatgacacagacaagccaagggccattgtggtc
aatgctgagaaagggtacatgtatttcaccacagtgcaggagcgctcagctaagattgaa
ggtgccagtttggatggtacagagagggagtctttgttcaccactggcctcatcagacca
gtagctctggcactcgacaataagctgggaaaactattctgggttgatgctgaccttaaa
cgcattgagagcagtgacctgacaggagcaaatcgcattgtcctacaggactcaaacatt
ctccagcctatggggctgacagtgctgggtgaccatctgtactggattgaccgtcagcag
cagatgattgaaagggtggacaagcttactggagatgggcgcacacgcatacagggacgg
atatcataccttacctccatccacgctgtggaagagatcgacccacaggagtttgcgtcc
cacccatgttctcgtgacaatgggggctgttctcacatctgcattgcgaagggtgatgga
acacctcgctgctcctgtcccatgcacctggtgttgctgcaggacctgctgcactgtgga
gagccacctacctgctcaacagagcaattcacctgctccacaggggagattgactgcatt
ccgatggcctggcgttgcgacggctttccagaatgtgaagatggcagtgatgaagacaac
tgtcccatctgttctgcataccagttccgatgtgacaaaggaggctgcattgatgctcag
agacgctgcaatggtgaattggactgtgctgatcactctgatgagcaggactgtgaaact
atctgccctcccaaccagttccgctgtggtgacaatcagtgtatcacaaagaaacaacag
tgtgacaattactccgactgtcctgatggatcagatgaactcgcctgcgagcatgtgtca
cctccctccagtggcatccctagcactgggcccaacactatcggcccagttattgccatc
atcctgctcgtcttcatcatcgggggagcttattttgtctgccagcgtgtggtgtgtcga
cgatacaaaggccccagtgggactttccctcatgagtacatcagcgggacgccccatgta
cctctcaacttcatcacccccagcggttctcagcatggtacctatcaaggtatctcctgt
gggaagtccatgatgagttctgtcagtctgatgggcagcagcagcagtggagctcctctt
tatgatagaaatcatgtgactggagcttcatccagcagctcttcatctacaaagggagcc
ttctatcctcagatcctgaaccctcctccctctccagccactgaccgctctctctacaac
acagagatcttctactcctccaacagtccatctaccaccagatcatatagaccctataac
ccggtccgtggcaccgtcccacctaccactccctgcagtaccgatgtctgcgacagcgac
tacactccccaccacccgccggctgggctggggctgtcagtgggtcgctggaagggctct
ggccacggcagccacaccaaacacaagtactacatggacctcaactcagactctgaccca
taccctccaccccccacgccccgatcccagtatatgtcagctgaggaaagctgccctcca
tccccttctacagagcgttcctacttccacctatgtccccctcctccctctccctgcact
gactcttcatga
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integrated database retrieval system
