Oreochromis niloticus (Nile tilapia): 100706984
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Entry
100706984 CDS
T06104
Symbol
shh
Name
(RefSeq) sonic hedgehog protein
KO
K11988
sonic hedgehog
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
100706984 (shh)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
onl01002
]
100706984 (shh)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
onl00536
]
100706984 (shh)
Peptidases and inhibitors [BR:
onl01002
]
Cysteine peptidases
Family C46: hedgehog family
100706984 (shh)
Glycosaminoglycan binding proteins [BR:
onl00536
]
Heparan sulfate / Heparin
Morphogens
100706984 (shh)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HH_signal
Hint
Vint
DrmE_C
Peptidase_M15_3
Intein_splicing
Hint_2
VldE
Hom_end_hint
Motif
Other DBs
NCBI-GeneID:
100706984
NCBI-ProteinID:
XP_003439270
Ensembl:
ENSONIG00000005944
UniProt:
I3JF43
LinkDB
All DBs
Position
LG9:16776418..16785750
Genome browser
AA seq
415 aa
AA seq
DB search
MLLWTKIALVGLICLSLVSSGMGCGPGRGYGRRRHPKKLTPLAYKQFIPNVAEKTLGASG
KYEGKITRNSERFKELTPNYNTDIIFKDEENTGADRLMTQRCKDKLNSLAISVMNQWPGV
KLRVTEGWDEDGHHLEDSLHYEGRAVDITTSDRDKSKYGTLSRLAVEAGFDWVYYESKAH
IHCSVKAENSVAAKSGGCFPGSSTVTLQDGTKKAVKDLRSGDRVMTADDDGNVIYTDFIM
FIDRDSTLRRIFYVIETDSGQKITLTAAHLLFVSPNSSSETEKRMSAIFASQVQPGQKVF
VFDAERSRLEPVTVKRIYTQSHEGSFAPVTAQGTIVVDQVLASCYAVIEDHDLAHWALAP
VRLAHWVSSFLFSSQPPSSAQNEGVHWYSKILYQLGTWLLDSHSIHPLGMSVYPS
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgctgctctggaccaaaatcgcgttggtcggtctcatctgcttgtccttggtatcctct
gggatgggatgcggaccgggcagggggtacggcagaagaagacatccgaagaagctgaca
cctcttgcgtacaagcagttcatccccaacgtcgcggagaagaccctcggggcaagcggc
aaatacgaaggcaagatcacaagaaactccgagcgatttaaagaactgactcccaattat
aacacagacatcatattcaaggatgaggagaacaccggtgctgacaggctaatgactcag
agatgtaaagacaagctgaactcactagccatctccgtgatgaaccagtggcccggagtg
aagctgcgggtcaccgagggctgggatgaggacggacaccatttagaagactcccttcac
tacgagggcagagccgtggacatcaccacttcagacagagacaagagcaaatacggcact
ctgtccaggctggcggtggaagccggatttgactgggtctactatgaatccaaggcccac
atccactgctccgtgaaagcagaaaattcagtggcagcaaagtcaggcggctgcttcccc
ggatcctccacggtcacccttcaggatggcaccaagaaagccgtcaaagatctcagaagc
ggcgacagggtcatgacagcagatgacgacggaaatgtaatttacaccgacttcatcatg
tttatagaccgagattcgacgctgaggaggatcttctatgtgatcgaaaccgactcgggc
cagaaaataaccctcaccgccgcgcacctcctcttcgtcagccccaacagctccagcgag
acggagaagcggatgtctgcgattttcgccagtcaagtccagcctggacagaaagtgttc
gtctttgacgcagagcgaagtcgactggagcctgtgaccgtcaaacggatttacacgcaa
agtcacgagggttcctttgcgcccgtgaccgcgcaggggaccatcgtggtggaccaggtc
cttgcgtcctgttacgcagtgatcgaagaccacgacttggcacactgggccctggcaccc
gtcaggctcgcccactgggtgtcctcgttcctatttagctcccagcctccaagcagtgca
caaaacgaaggagtgcactggtactccaaaatcctttatcaattagggacatggctcttg
gacagccactcgatccatccacttggaatgtcggtatacccaagttga
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