Oreochromis niloticus (Nile tilapia): 100707317 Help Entry 100707317         CDS       T06104                                  Name (RefSeq) collagen alpha-1(XX) chain   KO K24357   collagen type XX alpha Organism onl  Oreochromis niloticus (Nile tilapia) SSDB OrthologParalogGene clusterGFIT Motif Pfam:  fn3 VWA Collagen TPT Pur_ac_phosph_N Ig_DSCAM-DSCAML_C VWA_2 FN3_Tor_3rd EamA UAA Motif Other DBs NCBI-GeneID:  100707317 NCBI-ProteinID:  XP_025757338 Ensembl:  ENSONIG00000001615 LinkDB All DBs Position LG20:31665362..31715841 Genome browser AA seq 1985 aa AA seqDB search MACPVQFLCRGLRTVGLVLLYYVFSIGITFYNKWLMKGFHYPLFMTLVHLTIIFCLSALT RQAVQWWTGKPRVTLRWKEYLRKVAPTAIATALDIGLSNWSFLFITISLYTMTKSSAVLF ILFFSLVFKLEEPNPFLILVVLLISCGLFMFTFESTQFNLEGFILVLLASFIGGIRWTLT QVLTQKAELGLQNPIDAMYHLQPLMFLGLFPLFLFNEGLSLSTSEKLFRVTELSPLLYSL FTLSIGGSLAFGLGFSEFLLVSRTSSLTLSISGIFKEVCTLLLATFLMGDKMSMLNWLGF AVCLCGISLHVGLKTYYSKNKGLSLRQLKSKSPELELPLLQRNGDENKDSATDECDDEEE EEITLIRPVEREQASELSRNLRMLTSRLWNAVRNKLDSPNRQAPLMSPHLLATSLSSSWL MPFFLLSVLLMSAAVNGQGRLKLTVLSEDRLQMKWKEADGPVQGYKVRVRPISEVPQPEL MLTTTRGRATVAGLDSSQEYFLQVLVLNGTTEKLLAKRRFTMQTLREEEMIRSGTREHRK KLLPGGSGLGELEDATEALLDVPTVLYPEPTPTTPASASTTEPPATETPSELPDKTPEKS GKEKRKKKKERDRSKMENKEEQGTTQGKPAQEKPRKSPFPTQPGMSSRKPFECASDAAAD IVLLVDGSWSIGRLNFRRVRDFLEGLVTPFHIGPNHIQIGLTQYSGDPRTEWHLNNFTTK EQLLEAVRNFRYKGGNTFTGQALLHVMEENMRSSAGARSDTPFFLVLLTDGKSQDDAIAA ANRLKNAGIEIIAVGVKNADEAELRQVASEPVDLNVYNVNDFPLLSKLVARLVHILCGRI EERGITKRMEPGPTADPALSYPSPTDLRFSELGFREVKLHWTNPVKPVQQYRVVYHSAES QSPQEVVLPGSESVVLLEGLSSQTLYHVSIFPVYEDNVGLALRGTVTTLPLAMPANLKVT PSSYSTLRVSWGAAPGATQYLILYSALSHGEPDDAKEEKFGAEQTVVELAGLLPATDYSV TLYALYEEEPSDPVTAVTTTFPLPTPLSVQFPMVTHSMMRVSWVPGAGDVPGHRITYSTN HGSDVKQVEVTGVNSVLVQNLSSLSRYLISVQSHYAQGLSAALTSNVTTLKVPPPSDLRV TNFSDSDITVRWEAAADDVVSYLIKWISLSGGDLRQLRVSGDSEGAILVGVEDDKEYQIS LSALYGDGAQSEAVAIRYSTSSGGGPTSLTVSDETALSMVISWVPPNAHVLQYRVSYTAL TGADSQDHTVLVPGGEKQVMLESLQPDTRYSILVTAEYRNREGGSGSAQGKTATLRVSSV SVVRSDHSSICVSWRPVSAVDGYGIVIQDVKDKQSKQEVVSESSRSHCFTHLEPETLYRI SVHSLLGSAEGPAVSILHPTAAAPARIPIHPRMYPIHNEVCPEVTIRNSIVKGFNMMEAF GLTQRAHSSVEGVAAEPFVFNTLPTYTLYRDVQLTQSTKFIHPAGFSPEHTISIAFRMLQ DTPREPFALWQLTDNDFQPKMGVVIDPTTKHLLYFSLDYRGEVQELTFDQPQVHRLFYGS FHKVHLSVSQVSVSLSVDCQHVGERPARPLGNLPTDGFEMLGKLVKTRGPNSGSAPFQLQ SFEIVCNTTWASEDTCCDLPGVRDEESCPAPAYRCTCSSDVPGAPGPPGPPGKPGPRGEK GEKGEHGQKGEVGPPGNPGLEGGLGPVGSIGPRGITTQGKMGPPGARGEKGDPGRPGLQG VPGPPGQKGEEGIAGAKGIRGVEGNIGAPGVTGPRGFQGMPGYPGPIGERGPPGPVGPTG LPGNKGERGEKGEPQSMAMIYQLVTQACEQLVHKEVLKLDMFINEIGRKPVPIEEPVGPP GEPGIPGPKGPPGARGSQGRVGPRGTPGRPGYPGEQGRKGAPGDKGDAGSNVQGPPGVKG LAGPPGESKLGIPGPKGENGKPGPSGISGTPGQPGEIGPPGVCDNSGGCRMIPQQTEDSY DDYQP NT seq 5958 nt NT seq  +upstreamnt  +downstreamnt atggcgtgcccggtccagttcctgtgcagggggctgcgcactgttggattagttcttctc tactatgtcttctctataggcatcacattctataacaaatggctaatgaagggcttccat taccccctcttcatgactttagttcacctcaccatcatcttctgtctgtcagctctgaca cgacaggctgtgcagtggtggacagggaaacctcgtgttactctgaggtggaaagagtac ctcagaaaagtagcacccacagccatcgcaacagcgctggatatcggactttccaattgg agcttcctcttcatcaccattagcctgtataccatgaccaagtcctcagcagtgctgttt atcctgtttttctctctggtctttaaactggaggagccgaacccatttctgatcctggtg gtcctgttgatctcctgcggtctctttatgtttacctttgagtcgacccagtttaacctg gaaggctttattctggtgctcctagcatccttcataggggggattcgatggaccctcact caggtcctcacgcagaaagccgagctgggccttcaaaacccaatagatgccatgtaccac ctccaacctctcatgttccttgggctctttcccctcttcctgtttaatgaagggctgagc ctcagcacctcagagaagttattccgggtgacggagctctcgcctctcctgtattccctc ttcacattaagcatcggcggttcactggcctttggtttgggcttctctgagtttctgctg gtctcccgaacctccagcctcaccttatccatatcagggatctttaaggaagtgtgtact ctgcttttagccacttttctgatgggagacaaaatgagtatgcttaactggctgggattc gctgtgtgtctgtgtggtatttcattacacgtgggactcaagacatattattccaaaaat aagggtctttctttaaggcagctcaagagtaagagcccagaactcgagctgccgttactg cagcgaaatggggatgaaaataaggactcggctactgatgaatgtgatgatgaagaagaa gaagagatcactctaatacgacctgttgagagggagcaggcttcagagttgagcagaaac ctgcgcatgttgacatcccgcctctggaatgcagtgcggaataaactggactcaccgaac cgccaggctccactcatgtctcctcacctccttgctacttcattgtcgtcttcctggcta atgccatttttcctgctcagtgtcctgctgatgtctgctgctgtcaatggccaaggtcgt cttaagctgacggttctgtctgaagacagactgcagatgaagtggaaggaggctgatggg cccgtgcagggttacaaggtcagagtgagaccgatttcagaggtgccacagccagagctc atgttgactaccacccggggccgggcaacagtggcaggtctggactccagtcaggaatat ttcctccaggtccttgtgctcaatgggacgacagagaaacttcttgcaaagagacgattc acaatgcagactctgcgggaggaggagatgatccgcagtggcaccagagagcacaggaag aagttgttgccaggtgggtcaggattaggagaactggaagatgcaacagaggctctgctg gatgtaccaacagttctgtatccggagcctacgcccaccactcctgcctctgccagtact acagagcctccagctacagaaaccccctctgaactcccagataagacccctgagaaaagt ggcaaagagaagaggaagaagaagaaagagcgggatcgttccaagatggagaacaaggag gagcagggaacaacacagggtaaaccagctcaggagaaacccagaaagagcccatttcct acccagccaggcatgtcttcaaggaaaccatttgaatgtgcgagcgatgcagccgcagac atcgtgttgttggtggacggctcctggagcatcggacgccttaacttcagacgtgtccga gacttcttggagggcctagtgacacctttccacattggaccgaatcacattcagatcgga ctgacacagtacagtggagacccacgcacagaatggcacctcaacaacttcaccactaaa gagcagctgttggaggcagtgaggaacttcagatataagggaggaaacacatttacaggt caggcactactccacgtcatggaggagaacatgaggtccagtgcgggtgcaagatctgac actccgttttttctggtgttgttgactgatgggaaatctcaggatgatgccattgctgca gccaaccggctaaaaaatgcaggcattgaaatcatcgctgtaggtgtaaagaatgctgat gaagcggagttgagacaagtggcctcagagccagtggatctgaatgtctacaatgtcaat gacttccctctgctcagcaagctggtggcacggctggtccacatactgtgcgggaggata gaggagcgcggcatcacaaagcgaatggagcctggtcccacagcagatccggccctctcc taccccagtcctactgatctccggttttcagaacttggattcagagaggtgaagcttcac tggaccaatcctgtgaagccggtccaacagtacagagttgtgtaccacagtgctgagagt cagagtccacaggaggtggtgttacccggctcagaatctgttgtgttgctggaaggcctc tcctctcaaactctgtaccacgtctccatctttcctgtgtatgaggacaacgtaggctta gcgctcagagggactgtcacaacattgcctctggccatgccggccaacttgaaagtgact ccttcatcttatagcacgttgcgagtgagttggggtgctgcacccggcgcaacacagtac ttgatcctgtactcagcactcagccacggagagcctgatgatgccaaagaggagaaattc ggtgcagaacaaactgtggtggagctggcaggattactgccggccacagactactctgtc actctttatgcgctttatgaggaggaacccagcgaccctgtcactgctgttaccaccaca ttccccctcccaacaccactgagtgttcagttcccgatggtcacccacagtatgatgaga gtgagctgggtgcccggggctggggatgtccccggccatagaatcacctacagcaccaac cacggcagtgatgtcaagcaggtggaagtgacaggagtgaactcagtgctggtgcagaac ctttcctctctttccagatacctcatttctgttcagtctcactacgcacaaggcctgtct gcagcactcaccagtaacgtcaccacactgaaggtgcctcctccttcagaccttagggta actaatttctcagacagtgacatcacggtgcgctgggaagctgcagctgatgatgttgtt tcttacctcattaagtggatctccctaagtggaggcgacctgagacagctgcgtgtgagt ggtgacagtgaaggagcaattcttgtaggggtggaggatgataaggagtatcagatttca ctgtctgcactctatggagatggagctcagagtgaagctgtggccatacgctatagcacc tcatctggtggaggcccaaccagcctcacggtttctgatgagactgccctcagcatggtg atcagctgggtacctcccaatgctcatgtcctccagtatcgtgtgtcctacacagcattg actggagctgatagccaggatcacactgtgctggtccctggtggagagaagcaggtgatg ctggagtcattgcagccagatacacgttacagcatcttggtcaccgctgagtaccgcaac agagaaggaggcagcggttcagctcagggcaaaactgccactttgcgggtaagcagtgtg agtgtggtcaggtcagaccactccagtatctgtgtgtcatggagaccagtatctgccgtt gatggatatggtattgtaatccaggatgtaaaagacaagcaatcaaagcaagaagttgtg agtgagtccagcagaagccactgtttcactcatctggaacctgagactctgtatcgcatc agcgtgcactctcttctcggctcagcagagggcccggcagtctctatcctccatcccaca gctgcagctccagcccgaattcccatccatccccggatgtaccctatccacaatgaagtg tgccctgaagtcaccatcagaaacagcattgttaaagggttcaacatgatggaagccttt ggtctgactcagagagctcactcatcggtggagggagtggcagccgagccttttgtcttc aacacgctccccacctacactctgtacagagacgtccaactgacacagagcaccaagttt atccacccagcaggtttctccccagagcacaccatcagcattgccttccgaatgctgcag gatacacccagggagccttttgctctctggcagctcacagacaatgacttccagccaaag atgggagtggtgattgaccccaccaccaagcacctgttatacttcagtctggactacaga ggtgaagtgcaggagctgacctttgaccagccacaggtccacaggctgttctatggcagt tttcacaaggttcacctttctgttagccaggtgagtgtatccttgtctgtggactgtcag cacgtgggtgagaggccagcccgtcctctaggcaacctgcccactgatggatttgagatg ctgggaaaactggtgaagacccgaggacctaacagtggctcagccccgtttcagctgcag tcttttgaaatagtctgtaacaccacgtgggcttcagaggatacctgctgtgacctgcct ggagtgagagatgaggagagctgccctgcccctgcatacaggtgtacctgttcctctgac gtccctggagctcctggtccccctggaccacctgggaagccaggccctcgtggcgaaaaa ggtgaaaaaggagagcatggccaaaagggagaagtaggtcctccaggaaatcctggactt gagggaggccttggacctgtgggcagcatcgggccgcgaggcattacaacgcagggcaaa atgggtccaccaggagcaaggggagagaagggagatcctgggcgaccgggactgcagggg gtaccaggacctccaggtcaaaaaggggaggagggaatcgcaggtgccaagggcatcaga ggtgtggaaggtaacatcggcgcacctggcgtcactggacccaggggtttccaaggaatg ccaggatacccagggcctataggagaaaggggccccccaggtcctgtgggacctacgggc ttgccaggtaataaaggggaaagaggagaaaagggagaacctcagtccatggctatgatc taccaactggtcacacaggcctgtgaacaactagtacataaggaggtgttaaagctcgac atgttcattaatgagatcggtcgtaagccagttccaattgaagagccagtggggcctcca ggggaaccaggaataccagggcccaagggcccaccgggtgccaggggctcccagggtcgt gtaggcccaaggggaacacctggcaggcctggatatccaggagagcaaggaaggaaaggt gcgccgggggataaaggtgatgcagggtccaatgtccagggtcccccaggggtcaaggga ttagcaggacctcctggtgagtctaagctgggaatcccaggtcccaaaggggaaaatggt aagccggggccatctgggatctccggaacaccgggtcagccgggcgagattggaccaccg ggtgtttgtgacaacagcggaggctgccgcatgattccccagcaaacagaagactcttat gatgactaccagccttga

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