KEGG   Oreochromis niloticus (Nile tilapia): 100707450
Entry
100707450         CDS       T06104                                 
Name
(RefSeq) nectin-1 isoform X1
  KO
K06081  poliovirus receptor-related protein 1
Organism
onl  Oreochromis niloticus (Nile tilapia)
Pathway
onl03266  Virion - Herpesvirus
onl04514  Cell adhesion molecule (CAM) interaction
onl04517  IgSF CAM signaling
onl04520  Adherens junction
onl05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:onl00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03266 Virion - Herpesvirus
    100707450
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecule (CAM) interaction
    100707450
   04517 IgSF CAM signaling
    100707450
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04520 Adherens junction
    100707450
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    100707450
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:onl04515]
    100707450
   04090 CD molecules [BR:onl04090]
    100707450
Cell adhesion molecules [BR:onl04515]
 Immunoglobulin superfamily
  Nectin family
   100707450
CD molecules [BR:onl04090]
 Proteins
  100707450
SSDB
Motif
Pfam: C2-set_2 V-set Ig_3 Ig_2 I-set ig Ig_PVRIG Ig_6 VEGFR1-3_N_Ig-like
Other DBs
NCBI-GeneID: 100707450
NCBI-ProteinID: XP_005472244
Ensembl: ENSONIG00000004917
UniProt: I3JBE2
LinkDB
Position
LG10:complement(13740311..13764535)
AA seq 502 aa
MGMEKAGVWIFLITACLIPGINGQTVEMDDGKSGYVGSRVDLLCRFINSSPPVKISQVTW
QKLVNGTKQNVAIANPSLGVSVAPPYRDRVTFKNAAVRRRTPTLEDTTVTFSSLRLSDEA
TYICEYTTFPAGNRENTVNLTVYVRPTTQMSLSTPTLVARSSNLKTPVATCVSSNGKPPG
TIRWETRVPGEVTTREYRNSDGTFTVQSDYILVPSKETHRETLTCVTTYNEEVYTDSVTL
DIQYEPDVLVDGFDGNWYLNRENVQLSCIADANPAVSLYQWRVINGTIPSNAEIRDNVLT
FKGPVTYDLQGIYVCDATNSIGTRSGSVEVSVLEKPLPQIATSDVISVIALLLAAGVLLG
ITITVLVLKIRSRKYDASDSPSRKLSQPIRKRPADDVQHSGRFYEELPSTADYVSYRLAC
NKEDYPEPYSPPINPPLTFLPQHPYQSTPPNPATTISSTAASRNTFSPPSHTTAIFKYPS
VPGLSPPPPGVAAYTFPKEQYV
NT seq 1509 nt   +upstreamnt  +downstreamnt
atgggcatggaaaaggctggagtgtggatattcctgataacagcttgtttaattccagga
ataaatggacagactgtggaaatggatgatgggaagtcggggtatgttggctcaagggtg
gatctgctgtgccggttcattaacagctctccgcctgtcaaaatctcccaggtaacatgg
cagaaactggtgaacggcacaaagcagaacgtggcaatagcaaatccgtccctgggtgtg
tctgtggccccgccctacagggaccgcgttaccttcaagaacgcagcagtaagacgacga
actcccacccttgaagacaccaccgtcaccttctcttcgcttcgcctctctgatgaggcc
acctatatctgtgaatacaccaccttcccagcaggaaaccgagagaacacagtgaacctg
actgtctatgttcgcccaacaactcagatgagtctgtccacaccaacactggtggctcgt
tcatccaacctaaaaactccagtggctacctgcgtctcttccaatggaaagccacccggt
acaatcaggtgggagaccagggtaccaggagaagtgaccacccgagagtacaggaactca
gacgggacattcacggttcagagcgactacattttggtgcccagcaaagaaacacacaga
gagacgctcacctgcgtcaccacctacaacgaggaagtctacaccgacagcgtcaccctc
gatattcagtatgagccagatgttttagtggacgggtttgatggaaactggtacctgaac
cgagagaatgttcagctgagctgcatagctgatgccaacccggccgtctctctgtatcag
tggagagtgattaatggcaccatcccgagcaacgctgagatccgagacaacgtccttacc
tttaaagggccggtcacatatgacctgcagggaatctacgtgtgcgatgcaacaaacagc
atcgggacacgatcaggctctgtggaggtcagcgttttagaaaaaccattaccgcagatc
gcaacgagtgacgtcatcagcgtaatcgccttattattggctgctggagtgctcctgggc
attactatcacagtcctggtgcttaaaataagaagtagaaagtacgacgcctctgactct
ccgtccagaaaattgtcccagccaataagaaaaagaccagcagatgatgttcagcattca
ggacggttttacgaagagcttccaagcacagctgactatgtgagctacagactggcctgt
aacaaagaggattacccagagccctactcccctccaatcaaccctcctcttacatttctt
ccccagcacccctaccaatctactcctccaaaccctgcaacgaccatcagcagcaccgcc
gcatcaagaaacaccttctctcctccttcacacaccactgccatctttaaatacccctct
gtaccaggtctgtcccctcctcccccaggagtagcagcgtacacttttcccaaagagcag
tatgtctga

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