Oreochromis niloticus (Nile tilapia): 100707538
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Entry
100707538 CDS
T06104
Symbol
ttc28
Name
(RefSeq) LOW QUALITY PROTEIN: tetratricopeptide repeat protein 28
KO
K24936
tetratricopeptide repeat protein 28
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
onl03037
]
100707538 (ttc28)
Cilium and associated proteins [BR:
onl03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
100707538 (ttc28)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_7
TPR_1
CHAT
TPR_2
TPR_8
TPR_10
TPR_MalT
TPR_16
TPR_11
RPN7
TPR_17
TPR_14
TPR_9
TPR_6
TPR_NPHP3
PUB
TPR_19
BTAD
HlyE
AP4E_app_platf
Wzy_C_2
DUF3856
Motif
Other DBs
NCBI-GeneID:
100707538
NCBI-ProteinID:
XP_005473232
Ensembl:
ENSONIG00000010671
LinkDB
All DBs
Position
LG12:12497912..12678689
Genome browser
AA seq
2479 aa
AA seq
DB search
MEKQATLKEKFSIFGSRTAGRPIRCVGDDGARYGLSKAEFMEKVQQSNEACQRGDFQAAV
HLYSDALQVDSQNCILYSNRSAAFLKLGQHQAALEDAEKACELNPKWPKAYFRQGVALQY
LGRHADALAAFASGLAQDPKSLQLLVGMVEAAMKSPLRESLEPTYQQLQKMKLDKSPFVV
VSVIGQELLTAGHHTASVVVLEAALKIGTCSLKLRGSVFSALSSAHWSLGNTEKSTSYMQ
QDLEVAKTLGDQTGECRAHGNLGSAFFSKGNYREALTNHRNQLVLAMKLKDREAASMALS
SLGHVYTAIGDYPNALASHKQCVLLAKQSKDQLSEARELGNMGAVYIAMGDFDNAVQCHE
QHLSIAKALENKREEARAYSNLGSAYHYHRNFDKAMSYHTHVLELAQELEEKSIEMRAYA
GLGHAARCMQDLERAKQYHEQQLAIAEGLKDRAAEGRASSNLGIIHQMKGDYETALKLHK
THLAIAQELNDYAAQGRAYGNMGNAYNALGAFDQAVRYHRQELQISMEVNDRASQASTHG
NLAVAYQALGAHDRALQHYQNHLNIARELRDVQSEARALGNLGNFHCSRGEFPQAVPYYE
QYLRLSPDLQDMESEGKVCHNLGYAHYCLGNYQDAVKYYEQDLALAKDLHDKLSQAKAYC
NLGLAFKALGDFSKAEECQKYLLSLAQSLNNAQARFRALGNLGDIFVCKKDVAGAIQFYE
QQLALAHQVKERRMEACAYAALGATYRLVQKYDKALGYHTQELEVYQELGDVSGECKAHG
HLAAVYMALGKYAMAFKSYEEQLELGRRLKDPVVEAQVYGNMGITKMNVGVMEEAIGYLE
QQLATLQQLSGNEAVMDRGRAYGNLGDCYEALGDFEEAIKYYDQYLSVAQSLNRMQDQEK
AYRGLGNGHRAMGNLQQALVCFEKRLVVAHELGECGGKAQAYGELGALHSQLGNYEQAIS
CLERQLAIARDTQDRLLEGDASCGLGTVYQAMGEYETALRCHQSDLEIAEEAGSTTRQAR
AYGNLGLTYESLGNYERAVVFQEQHLSVAAQTNDLAAKTLAYGSLGRTHHALQNYSQAVM
YLQEGLRLAEQLARREDEAKIRHRLGLSLWASGNLEEAQHQLYRASALFETIRHEAQHST
DYKLSLFDLQTSCYQALQRVLVSLGHHDEALAVAERGRTRAFADLLVERQTGQQESDPYT
PVTVEHILDTVNSQRALVLYFSMAAGYLYSWLLAPGAGILKFHEVYLGEGVAEGASEFQE
GGVGGVVSGSSLEQHIASAREALGVESYYSRGCSSSETESEAGDLLDQQFEELNNKLNSV
TDPTGFLRMVSRNNLFNRSCQSMTSLFSNTMSPAKDGNSSLPRRSSNLGKPPLRALYDLL
IAPMEGGLMHSSGPVGRHRQLVMVLEGELYLIPFALLKGSSSNEYLYERFSLIAVPSIHG
LGTSAKAHSRRPGPAPCGGVSMAAVVGNPRLPSPVMDRWLWGPMPSAEEEALMVAELLGC
QPLAGSSATKERVMSALTQAECAHFATHISWKLAALVLTPNPEAVPGGASANVGVGTVGR
GAGGRTGSSGRGRKGSTGSGYTIPESLHMQDDSSDVESICDSPPLQEFLLTAADILDLRL
PVKLVVLGSYQESSSKVTADGVVGLTRAFLAAGAQCVLVSLWPVPVAASKVFVHAFYSAL
LNGTKASAALADAMKTVQSSKQYSHPSNWAGYMLIGNDVKLNSPSSLIGQALAEILQYPD
RARDALRVLLHLVEKSLQRIQNGQRNSMYTSQQSVENKVGGVPGWQALLTAVGFRLDSAG
TGIPAAVFFPTADPGDRLQQCSTTLQSLLGLPPPALQALCKLITASEAGEQLINRAVKNM
VAMLHQVLVQLQTGEKEQDFSLLPIQVSISVQLWRLPGCHEFLAALGFDLCEVGQEEVVL
KTGKLANRRTLHFALQSLLALFDSTELPKRLSLDSSSSLESLASAQSVSNPLPMGYSSLP
FSPPCLDNQASDAISVYSLSSVASSMSFASKSDCDFLAHRQRGGVTAHYSVHKHPHVPRS
RSSPHGAAAAVAGARGDEEEYEGFSIISSEPLGSHCDSLPLPPGHSQRHHRGGRGVVGGS
STGTGRGYTVSVSSRGSVSTPTSPIKTNLVPSPNSPFQKVGKVSSSDTGESDQSSTETDS
TVKSQEEKTVPLDPQELAQKILEETHSHLRAVGSLQRAGAEAGTAGGTSTRSSAFRSSET
SAFSRPNSGASGRAQSSPRPKPPSRSSSLQKISSGYNSPAVSESSQKEGSHPSPTSDTHA
QFKLKYPSSPYSGHISRSPSNVSPSSGHQSPAGSAPSPALSYSSTGSACSTSADTPDLDR
LRRGVIDEKVQAIHNLKTFWANAAAQQQQHLGPVKAVHSTPGPLASASRDVLSLLNLSPR
HCSPNDTQDSLELRELGLQSLDRGSKNSSNGHHCSNPRKVAPSPTISTSSSPGARSIRLP
AGNGYKFLSPGRFFPSSKC
NT seq
7440 nt
NT seq
+upstream
nt +downstream
nt
atggagaagcaagcgactctgaaagaaaagttttcaatcttcggttctcggacagcgggc
agacctatccggtgcgttggagacgacggggccaggtacggtctgagcaaagctgagttc
atggagaaagtgcagcagagcaatgaggcttgtcagcgaggtgactttcaggcggccgtt
catttgtacagtgatgcactgcaggtcgactcacagaactgcatcctgtacagtaaccgt
tcagcggcttttctcaaattgggccaacaccaagcagctctggaagatgctgagaaagct
tgtgagcttaatcccaagtggccaaaggcatacttccgacagggtgttgcccttcagtac
cttggacgccatgccgacgcgctggccgccttcgcctcggggctggcccaagaccccaag
agcctacagctactggtgggcatggtagaagccgccatgaagtcgcccttacgagagtct
ctcgagcccacctatcagcagctgcaaaagatgaagctggacaaaagtccatttgtggtg
gtttctgtgatcggccaggagctgctgacagcaggccaccacacggcctctgttgtggtg
ctagaagccgcactgaagatcggcacatgcagcctcaagctacgcggctccgtcttctcc
gccctcagcagcgctcactggtccctgggcaacacagagaagagcacgagctacatgcag
caggacttggaagtggccaaaaccttaggtgaccaaacaggggaatgccgtgctcacggg
aatctgggctcggcattcttctccaaggggaactaccgtgaagcgctgaccaaccatcgc
aaccagctggttctggccatgaagttaaaggacagagaggctgcctcaatggcactgagc
agcttgggccatgtatatacagccataggggactacccgaatgccctagctagccacaag
cagtgtgtccttctggccaagcagtccaaagatcagctgtctgaggctcgcgagctggga
aacatgggagctgtctacattgccatgggagactttgataatgctgtccagtgtcacgag
cagcacctgagcatcgccaaggccctggaaaataaacgtgaggaggcgcgggcctatagt
aacctgggcagcgcttaccactatcaccgcaactttgacaaggccatgtcctaccatact
cacgttctggagcttgcgcaagagctggaggagaagtccatcgagatgagagcctacgca
ggactgggtcatgctgcccgctgtatgcaggatctggagagggccaagcagtaccacgaa
cagcagctcgctatagccgagggcttgaaggacagggctgcagaaggaagggcctcttcc
aatttaggcatcatccaccagatgaagggagactatgagaccgcactgaaactccacaaa
acacacctggctattgctcaggagctaaatgactatgctgctcagggtcgggcttatggc
aacatgggtaatgcctacaacgccctgggagcctttgaccaggctgttcgctaccaccgt
caggagctgcagatctccatggaggtcaacgaccgagcctcgcaggcctccacccatggc
aacctggctgtggcttaccaagctctgggtgctcacgaccgtgctctgcagcattatcag
aaccatctcaacatagctcgtgagctcagagatgtccagagtgaggcacgggctctggga
aacctcggcaacttccattgctctcgaggagagtttcctcaggctgtgccctactatgag
cagtacctccggttgtctcctgacctccaagatatggagagcgaagggaaagtttgtcac
aatctgggttatgcccactactgcttgggcaactaccaggatgccgtcaaatactatgag
caggacctagctctggccaaggatctacatgacaaactgagccaggccaaggcatactgt
aaccttggtttggctttcaaggccctaggagacttctctaaggcagaggagtgtcagaag
tacctgctgtctctggcccagtccctgaacaatgcacaggctcgcttcagagctctgggg
aacctgggagacatatttgtttgtaaaaaggatgtggccggggccattcagttttatgag
cagcaactggcattagctcaccaggttaaggagcgtaggatggaggcctgtgcgtatgct
gcccttggggccacctatagacttgtacagaaatatgacaaagccttgggctaccatacc
caggagctggaagtgtaccaagagctcggtgatgtgtcaggagagtgcaaagcccatggt
catctggcagctgtctacatggccctcgggaagtacgcgatggctttcaagagctacgaa
gagcagttagaactcggtcggaggctgaaggatcctgttgtggaggctcaggtgtatgga
aacatgggcatcacgaaaatgaatgtaggggtgatggaggaggctattggctaccttgaa
cagcagctggccactttacagcagctgagtggaaacgaagcagtaatggaccggggcagg
gcctatggtaatctgggagactgttacgaggctctcggagacttcgaagaagccatcaaa
tactatgaccagtatctgtcagtggctcagagcctcaaccgcatgcaggaccaggagaaa
gcctatagaggcttaggcaatggacacagggctatgggaaatttacaacaggcacttgtg
tgttttgagaaacggctagtggtggctcatgagttgggcgagtgtggaggcaaggctcag
gcctacggtgaactgggcgcgctccacagccaactgggcaattacgagcaggccatctcc
tgtctggagcgtcagctggccatcgcccgtgacacccaggacaggctactggagggtgac
gccagttgtggtttggggactgtatatcaagccatgggagagtacgaaacggccctgcgg
tgccaccaaagtgacctggagatcgcagaggaagcgggcagcaccacacgccaggcccgc
gcgtatggaaacctgggtcttacctatgagtcgctaggaaactacgagcgggcggtcgtg
ttccaagaacagcacctaagtgtggctgctcagactaatgacttggctgccaagacactg
gcctatggcagcttggggagaacacaccacgcactgcaaaactactcacaagctgtcatg
tacctgcaggaaggcctgcggcttgcggagcagcttgctcggcgtgaggacgaggcgaag
atccgccatcgtcttgggctttctctgtgggccagtgggaatctggaggaggcccagcat
cagctttaccgagcatcagcgctgtttgagaccatccgccacgaagcccaacacagcaca
gattacaagctttctctgtttgacctgcaaacctcctgctaccaggctctccaaagggtc
cttgtcagccttggccaccacgacgaggccctggcagtggcagagaggggtcgtacgaga
gcctttgctgatctcttggtggagaggcagacgggccagcaggagtcggatccatacacg
ccggtaacagtggagcacatcttggataccgtgaacagccagagggctttggtgctttat
ttttctatggctgctggttacctgtacagctggctgctggctccaggagcaggcatcctg
aagtttcatgaggtgtacctgggcgagggcgtagccgaaggggcgtcggagttccaagag
ggaggtgtcggcggagtggtcagtggctcctcgttggagcagcacatcgccagtgcccgt
gaggctctgggggtagagtcttattacagcagagggtgctcgagcagcgagactgagagt
gaggcgggagatttgttggatcaacaatttgaggagctcaacaacaagcttaactccgtc
actgatccaacgggcttcctgcggatggtgtccagaaacaacctgttcaacaggagttgc
cagagtatgacaagcctgttcagcaacacaatgtctcctgccaaagatggcaactcttcc
ctgccccgtcgctccagcaaccttggaaaacctccactgcgggcactttatgatttgctc
attgcacctatggaggggggcttgatgcactccagcgggcctgttggcagacacaggcaa
ctagtgatggtgctggagggagaactgtacctcatcccgtttgctctgctaaaaggaagc
tcttctaatgaatacctatatgagcgtttcagcctcattgctgtgccctccattcatggc
cttggaaccagtgcaaaggctcattctcggcgtcctggaccagccccatgcggcggcgtc
tcaatggcagcagtggtgggtaacccgagacttccctcacctgtgatggatcgctggctg
tggggacctatgccgtctgcagaggaggaagcactaatggttgctgagctgctgggatgc
caaccccttgctggctcttctgccacaaaggagagggtcatgagtgctctaacacaggct
gaatgcgcccacttcgccacccacatttcttggaaattagccgctctggtgctcacccca
aaccctgaggctgtgcctgggggagcaagcgccaatgtgggagtgggaacagtgggaaga
ggtgcaggggggagaacaggcagcagtggccgaggcagaaagggctccactggaagtggc
tacaccatcccagagtctctccacatgcaggatgacagcagtgatgtggagagcatctgt
gacagcccgcccctgcaggagttcctgcttacagctgcagatattttggatctgaggttg
cccgtcaagctggttgtgctggggtcataccaggagtccagcagcaaggtcacagcagat
ggtgttgtgggactgactagagctttcctggctgccggggctcagtgtgtacttgtgtcc
ttgtggcctgtcccagttgctgcctccaaggtttttgtccatgccttctactccgccctt
ctcaacgggaccaaagctagtgcggcactggcagatgccatgaagactgtccagagcagc
aagcagtactcacacccttccaactgggcaggatacatgctgattggcaatgatgtgaag
cttaacagcccatcttccttaattggccaagctttagctgagattctacagtatccagat
cgggctcgcgatgctctgagagttttacttcacttggtggaaaagtctcttcagaggata
cagaatggccagcgtaattccatgtatacatcccagcagagtgtggagaacaaagtaggg
ggtgtccctggttggcaggctctgctgacagctgtgggcttccgtcttgactctgcaggc
accggtatccccgctgctgtcttctttcccactgctgacccaggagacaggcttcagcag
tgcagcaccaccttacagtcactgctgggtctgccaccgccagctctccaagctttgtgc
aaactcattacagcttcagaggcaggagagcagctcatcaaccgggctgttaaaaatatg
gtggcgatgctccaccaggtgctagtccaactacagacaggggagaaagaacaggatttc
tccctgctgcccattcaggtgtccattagtgtgcagctatggagactgccaggatgccat
gaatttctggctgctcttgggtttgacttatgtgaggtaggccaagaagaagtagtgctg
aagacaggcaagctagccaaccgccgcaccttgcactttgctctccagtctctgctggca
ctctttgactccacagaactgcccaagcgcttgagcctggacagctcatcttcccttgag
tccctagcttcagcccagtctgtgtcaaaccccctgcccatgggatactcaagccttccc
ttctctcctccttgcctggacaatcaagcatctgatgccatttctgtttatagccttagc
tctgtagcctcctctatgagctttgcttccaagtcagactgtgatttccttgctcatcgg
cagcgcggtggggtcacagcacactactcggtccacaaacaccctcatgttcctcgcagc
cgctcgtctccccatggagcagctgctgcagtggcgggagcccgcggagatgaggaggaa
tatgagggcttttccattatcagcagtgagcccctgggaagtcattgcgactctctgcct
ttgccaccaggccacagccagcgccaccaccggggaggcaggggtgttgttggtggctcc
agcacaggaacggggagagggtacactgtatctgtatcatcgaggggcagtgtcagcacc
ccaacatcccccatcaaaacaaacctggtgcccagcccaaactcaccgtttcagaaagtc
ggtaaggtgagcagctcagatacaggagaatctgaccagtccagtactgagacggacagc
actgtcaagtctcaggaagaaaaaactgtccctctagatcctcaggaactggcccagaag
attctggaagagactcacagccatttgcgtgctgtgggtagtcttcagagggctggtgca
gaggccgggacagctggaggaacctcaacacggagtagcgcattccgctcttctgaaact
agtgcgttcagccgtcctaacagcggcgctagtggtcgagctcagtcttccccaagaccc
aaacctccctcccgatcttcttcactgcagaagataagctctggctacaatagccctgcg
gtctctgagtcttcccaaaaggagggcagccatccttcacccacttcagacactcacgca
cagttcaaattaaagtacccgagctccccatacagcggccacatctctcgttcccccagc
aacgtgtctcccagttctggtcaccagtcccctgctggtagtgctccatctcctgctctt
tcctactcctctacaggctctgcctgctctacatcggctgacacgccggatttggatcga
ctaagaagaggggtcattgatgaaaaagtacaagctatccacaatctgaagaccttttgg
gctaatgctgcagcccaacaacagcaacatctaggtcccgtcaaagctgtccacagcaca
cccggtcctctcgcctctgccagcagagatgtactgagccttctgaacctctccccgcgc
cactgctcccctaacgacacccaagacagcctggagctgcgggagctggggctgcagtca
ctggataggggtagcaagaactcttccaatggacatcactgctccaaccccagaaaagtg
gccccatcacctactatttccactagcagtagccctggtgctcgttctatccgactacct
gctggcaatggatacaagttcctgtcacctggaagatttttcccttcctctaaatgctga
DBGET
integrated database retrieval system
