Oreochromis niloticus (Nile tilapia): 100707575
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Entry
100707575 CDS
T06104
Symbol
brf1
Name
(RefSeq) transcription factor IIIB 90 kDa subunit isoform X1
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
onl03021
]
100707575 (brf1)
Transcription machinery [BR:
onl03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
100707575 (brf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
Cyclin_N
Zn_ribbon_tTFIIB
RB_B
LnmK_N_HDF
Motif
Other DBs
NCBI-GeneID:
100707575
NCBI-ProteinID:
XP_003455637
Ensembl:
ENSONIG00000000246
UniProt:
I3IUM5
LinkDB
All DBs
Position
LG15:27003974..27017071
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AA seq
700 aa
AA seq
DB search
MSSRVCRTCGGSDIDVDQARGSAVCTSCGSVLEDNIIVSEVQFVEGSGGVSSAVGQFVSA
DGPIKAPLLGSGFHTSVGKESRAQTLQNGKRQIQQLGSQLQLNQHCLDTAFNFFKLVVSK
HLTRGRKTEHVIAACLYLVCRTEGTPHMLLDLSDLLQVNVYILGKTFLLLARELCINAPA
IDPCLYIPRFAHMLEFGAKTHEVSMTALRLVQRMKRDWMHTGRRPSGLCGAALLVAARMH
KFRRSVKDVIGVVKVCQTTLRKRLTEFEDTPTSQLTIDEFMRVDLEQECDPPSFTAAQHK
AKMQQLEQELAKKLDEVEGEISCYKDEIETELEKSRPKLRGIYAAYTKEVDPEDNGEVLS
MPSEPEEVESEDVELQAATHHLTEDFLCQVIQEEEGRGMKGDRKAEPEKESMGPHRQAAS
LSSILGKLPSAASLSLQQTFQTSDTSESGEKDLGDHPQSEELDLEGIDDQEIDKYILNEK
EVQVKTELWMKQNAEYLKEQKEKQERINKEKEEGTYKEKKKKKSKKRDQIEALTAGEAIE
RMLEKKKISSKINYDVLRDLNRGTGSPTRSPDHTPDTTAARKRLNRRRRRKTSDSNQDLA
ANTSIMGKRFRHLISSTPKKKKTAHQVESTVSVVTETETPAETESNPPPDSTAETSPTLL
TAPSPVEEEEEEEEEAEEECVSALQLVGDYGCDADEEEIF
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgagctctcgggtgtgcaggacctgcggggggtctgacattgacgtggaccaggctcgt
ggcagcgccgtgtgcaccagctgcggttcagttctggaggacaacatcatcgtgtccgag
gtccagtttgtggagggaagcggaggcgtgtcgtccgccgtgggacagtttgtgtctgct
gatggtcccattaaagcaccactccttggttctggtttccacaccagcgtcggcaaagag
tcgcgagcccagacacttcagaacggtaagcgtcagatccagcagctgggcagtcagctg
cagctcaaccaacactgcctcgacaccgccttcaacttcttcaagctggtcgtcagcaaa
cacctgacccggggccgcaagacagagcacgtcatcgctgcctgcctctaccttgtgtgc
cgcactgagggcacgccacacatgctgctggacctcagcgatctgctgcaggtgaatgtc
tacatcttaggaaagaccttcctgctgctggctcgtgagctctgcatcaatgctcccgcc
attgacccctgcctgtacattcctcgctttgcgcacatgttggagttcggggcgaagact
catgaggtttccatgacggctcttcgtcttgtacagaggatgaagagggactggatgcac
acaggacgccgaccctctggactctgtggagcagcactcctggtagcagctcggatgcat
aagtttcggcgttcagtgaaggacgtgattggcgtggtgaaggtctgccagaccacgctg
aggaagaggttaactgagtttgaggacacgcccaccagccagctgaccatcgatgagttc
atgagagtagatctggagcaagagtgcgaccccccctccttcactgctgcacagcacaaa
gccaaaatgcagcagttagagcaggagctggctaagaaactggatgaggtcgaaggagag
atcagctgctacaaagacgagatcgaaaccgagctggagaagagtcgccccaaactcaga
ggaatctacgccgcttacaccaaagaagttgaccccgaggacaacggcgaggttttgtca
atgccatccgagcctgaggaggtcgaaagtgaagacgtggaattacaagcggccacccat
cacctgaccgaggacttcctgtgtcaggtgatccaggaggaagagggacgtggcatgaag
ggagatcggaaggcagagccagagaaggagtcgatgggaccacaccgtcaggctgcctct
ctgagctccattctgggaaaactgccgagcgctgccagcctgagcctccagcagactttc
cagacctcggacacatcagagagtggcgagaaagatctcggtgaccacccgcagagcgag
gagctggacctggaaggtattgatgatcaagagatcgataagtacatcctaaatgagaaa
gaggttcaggtgaagacggagctgtggatgaagcagaacgccgaatacctgaaggagcaa
aaagagaaacaggagcggataaacaaagagaaggaggagggcacctacaaggagaagaag
aagaagaagtctaagaagcgggaccagatcgaggcattgacagcgggcgaggcgattgag
agaatgttagagaagaagaagatctccagtaagatcaattacgatgtccttagagacctt
aaccgaggaacaggaagtccgaccaggtcccctgaccacacccccgataccaccgcagca
cgaaaacgactcaaccgccgccggcgcaggaagaccagtgacagtaaccaagaccttgca
gccaacaccagcatcatgggcaagaggttccgccacctcatttcctccacaccaaagaag
aagaaaacagctcatcaggtagagagtacagtctcagtggttacagaaacagaaacacca
gcagagactgagtccaacccaccccctgactccacagcagaaacaagccccaccctccta
actgctccatcccccgtggaggaagaagaggaagaggaggaggaggcagaggaggagtgt
gttagcgctctgcagctggtgggagattacggttgtgatgcagatgaggaggagatcttt
taa
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