Oreochromis niloticus (Nile tilapia): 100707607
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Entry
100707607 CDS
T06104
Symbol
tmf1
Name
(RefSeq) TATA element modulatory factor isoform X4
KO
K20286
TATA element modulatory factor
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
onl04131
]
100707607 (tmf1)
Membrane trafficking [BR:
onl04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
100707607 (tmf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMF_TATA_bd
TMF_DNA_bd
ATG16
Motif
Other DBs
NCBI-GeneID:
100707607
NCBI-ProteinID:
XP_003442726
Ensembl:
ENSONIG00000020346
UniProt:
A0A669D9U3
LinkDB
All DBs
Position
LG5:complement(29886277..29896108)
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AA seq
1150 aa
AA seq
DB search
MSWFNASHLSSFAKQALTSAQKSIDRVLDIKEEDQWGGTTVMPHDDVTLPGKLSLSGGWG
LTQWEAPAEEKAITPPPSSEAITTPVTRTVVDESENFFSAFLSPGDSQAVTKTQVVSVPP
TKSQRRPQEKEKKSKEAVVQKDVESQMSIVVEGPQSGPADKIHESQKAAEIQVVEAKPSP
ADTVLLQPVSPVSSSSDLPCDSDSKASSVKTDADSVVSVDSKAEQSHTSVEQQPEKDTTD
SPQPKSAAPSDPSPPVSTKEVLLEHKDSKTEDRQNDTPSPPVSAFSSGTSTTSDIEVLDH
ESVLSESSASSRQETGEGKTGLHLMQGSFQLLTASTCGDFPRLEDYPKLTESCGSSSDAF
ERIDSFSVQSLDSRSVSEVNSDDEIPGSRTLASVTAGPAPLTVQQAECQKQEGGEAAKVD
EKEEDDEEGFTETMREQSLDEMEESGRSATPVNSEQPEDLTEQEANITLSDATAAAQEQI
TPPITAEMKSASTVQILELQKVIDELSGRLEKRESQLLAVSKDKARLEEECDNLKDEVIG
LKEESSTVQSLKEEFTQRIAEAERKAQLACKERDIAKKEIKGLREELSTRLNASDTMEII
KEKEEQIRGLLEEGEKLSKQQLQHSNIIKKLRVKEKESDTKITKQQKKIKDQEEELRQLQ
QVLDGKEEVEKQHRENIKKLNGVVERQEKELSRLQSDTEELQEKNRSLEAALDNSYKELA
ELHKVNASRASEAEEVALSRETQAREQLSLALEKAQEEAKIQQEALANQVADLRLALQRA
EQQQARKEDYLREEISELQQRLQDAETRNQELSQSVTSATRPLLRQIENLQASLGGQTAS
WEKLEKNISDRLADAQAQLAIAVEKERSATEELLSIKSQLASLESQNSLLRQEKARLLAQ
LDGEKNKREKLEDESSRDRVELENLRGEHSRMLEETKKEKLLLTNQLEMEKMKVEQEKKK
SYLAQEALKEKERKATAPLVGEAPASSTPSLSRSSSMSGADNGLHTSVLSQDDSLDHSLG
TMSVSMSGTNLYEAARLSGGSSIIENLQSQLKLREGEIAQLQLEITNLERRRSVMAQELV
RLTNQNDEMEEKVKEIPKLKVQLKDLEQRHNTILQMYGEKAEEAEELRLDLEDVKNMYKT
QIDELLKNQK
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgagttggttcaacgcatctcacctgtccagcttcgctaaacaagctttaacatcagct
cagaagtcaatcgaccgagttctggacatcaaagaggaggaccaatggggtggtacaact
gtaatgccccacgacgatgtcacattacctggaaagctttcattaagtggaggatggggg
ctgacacagtgggaagcacccgccgaggaaaaggccatcacaccacccccttcatcggaa
gccatcactactcccgtcactcgtactgttgtggatgaatccgaaaattttttcagtgcc
tttttgtcacccggagattcacaggctgtcaccaaaactcaggttgtgtctgtaccccct
actaagtctcaaaggcggcctcaagagaaagaaaagaaaagcaaagaggctgttgtccaa
aaagatgtggagagtcaaatgtcaatcgtggttgagggtcctcaatctggacctgctgat
aagatccatgagagtcagaaagctgctgagatccaggtggtggaggccaagccctcacca
gcagacactgtcctcctgcagccagtttctcctgtttcctcttccagtgatcttccttgt
gactctgacagtaaagcaagcagtgtgaaaacagatgctgactcagtagtttctgttgac
tcaaaagcagagcagtcacacacttcagtagaacagcaaccagagaaggataccacagat
tcccctcaacctaagagtgctgccccttctgatccgtcacctcctgtatccactaaggaa
gtactcctagagcataaagactcaaagacagaggatcgtcagaatgatacaccctctcct
ccagttagtgctttctcctcaggaacctcaaccaccagtgacattgaagtgcttgaccat
gagagtgtgttgagcgagagctcagccagctctagacaagaaaccggtgaaggaaagact
ggccttcacctaatgcaggggtccttccagcttctcactgcctccacatgtggagatttt
cctcgactagaagactacccaaaactcacggagagctgcggttcctcctcagatgcattt
gagcgcattgattcctttagcgtgcagtcactggatagccggagcgtcagtgaggtcaac
tcagatgacgaaatccctggcagtcggactctagcatccgtcactgcgggtcctgcccct
ttaacagtgcaacaagctgaatgtcagaagcaggaaggtggagaggcagcaaaggtagat
gagaaggaagaagatgacgaggagggattcactgaaacaatgagggagcagtcgctggat
gagatggaggaaagcggacgaagtgcgacacctgtgaatagtgagcagcccgaagacttg
acagagcaggaggctaatatcacactgtctgatgccaccgctgcagctcaagaacagatc
actccaccaatcactgcagaaatgaaaagtgcctcaactgtccagatactggagcttcaa
aaggttattgatgagctatcggggcgccttgagaagagagagtctcagctgctggcagtt
agcaaagacaaggccagactggaggaggagtgtgacaatctgaaagatgaagtgataggt
ctgaaggaggagagctccactgttcagtccctgaaggaagagttcacccagcgtatagca
gaggcagaaaggaaagctcagctggcctgcaaagagagagacatagctaagaaggagata
aagggcttgcgagaggagctttccacaagactaaacgccagtgatacaatggagatcatc
aaggagaaggaagagcagatcagaggtctgctggaagagggtgaaaagctgtccaaacag
cagctacagcacagcaacatcatcaagaaactgcgtgtaaaggagaaggagagtgacaca
aagatcaccaaacaacaaaagaaaatcaaggatcaagaggaagagctgagacagctccag
caggttctagatggaaaggaggaggtggagaaacagcacagggagaacatcaagaagctg
aatggtgtggtggaacgccaggagaaggagctgagcaggctgcagtcagacactgaggag
ctgcaggagaaaaacaggagcctcgaggctgctctggacaactcttataaggagctagca
gaactacacaaggtaaatgccagcagagccagtgaggctgaagaggtggctctgagcagg
gagacgcaggccagagaacagctgagtcttgctctggagaaggctcaggaggaggccaag
atacaacaggaagccctagcaaaccaggtggctgacctgaggctggcactgcagagagca
gagcaacagcaggccaggaaagaagattatttgagagaggagatcagtgaacttcaacag
agacttcaggatgcagaaactaggaaccaggagctcagccagagcgttacctctgccacg
cgacctttactgcgacaaattgagaacctacaggcctcactgggcggtcaaacggcctcg
tgggaaaaacttgagaagaatatctctgacaggcttgcggatgcccaggcgcagctagcc
attgctgtggagaaagagcgatcagcaacagaagaactgttgtccattaaatcccagtta
gcctctctggaatcccagaattccttgctccgccaggagaaagccaggcttctggcacag
ctggatggcgagaaaaacaagcgggagaaattggaagatgagagcagcagggatcgtgtt
gaattggaaaacctgcgaggagaacacagtcgaatgttagaggaaaccaagaaagaaaag
ttactgctgactaatcagttagagatggagaagatgaaggtggagcaagaaaagaagaaa
tcctatttggcacaggaagcactcaaggaaaaggagcgaaaggccacagcaccattggtt
ggagaggcgccagcatcatctacaccctccctgtctcgctccagctcgatgagtggggcg
gacaatgggctgcacacctctgttctttcacaggatgactctttagaccattcgctgggc
actatgtccgtatcgatgagtgggaccaacctgtatgaggcagccagactttctggaggc
tccagcattatagaaaacctccagtctcaactcaaactgagagaaggagagatagcacag
ctgcagcttgagatcactaatctggagaggagacgatctgtgatggcacaggagctggtt
cgactcacaaatcaaaatgatgagatggaggagaaggtgaaggagatccccaagttgaaa
gttcaactgaaggatctggagcagaggcataacaccattctgcagatgtatggagaaaag
gctgaagaagcagaggaactgagactggaccttgaagatgtaaagaatatgtacaaaacc
caaatcgacgaattgctgaagaaccagaaataa
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