Oreochromis niloticus (Nile tilapia): 100707620
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Entry
100707620 CDS
T06104
Name
(RefSeq) serine/arginine-rich splicing factor 5
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl03040
Spliceosome
onl05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100707620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
onl03041
]
100707620
Spliceosome [BR:
onl03041
]
Common components
Common spliceosomal components
SR proteins
100707620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
RRM_5
SET_assoc
Motif
Other DBs
NCBI-GeneID:
100707620
NCBI-ProteinID:
XP_003446380
Ensembl:
ENSONIG00000005759
UniProt:
I3JEG8
LinkDB
All DBs
Position
LG15:complement(16050513..16057080)
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AA seq
293 aa
AA seq
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MSGCRIFIGRLSPSAREKDVERFFKGYGRIRDIDLKRGFGFVEFDDPRDAEDAVYELDGK
ELCNERVTIEHARVRLRGGRGRGGGGGGGRFSDRYGRGSQNSRSRNPPPMRTENRLIVEN
LSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASHSDLKNALDKLSGKEINGRKI
KLIEAAKKRSRSRSRSESSSRSRSRSRGRSASRSPRRSRSPAKAHNRSRSRSGSPAGGAS
SPTSKSKEPAKRSSKMSKSATPPSPAPAQRASASRSRSRSRSRSRSPSTDSQR
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgagcggatgtcgtattttcatcggccggctgagcccctcggccagagagaaggatgtg
gagaggtttttcaaaggatacggccgcatccgagatatcgacctgaagagaggattcggc
tttgtggagtttgacgaccccagagatgcagaagacgctgtttatgagcttgatggcaaa
gagctgtgcaatgaaagggtgaccattgagcatgctcgtgtgcgtctgcgtggtggccgc
ggacgcggtggcggcggcggagggggacgtttctctgatcgctacggccgcggctcccag
aacagccggagtcgtaaccctcctccaatgcgcaccgagaaccgcctgattgtggagaac
ttgtcctctcgagtcagctggcaggacctgaaagatttcatgaggcaagctggagaggtg
actttcgcagacgcacatcgtcccaagctcaacgaaggggtggttgagtttgcttctcac
agtgacctgaaaaatgcacttgacaaactctctggaaaggaaattaatggcagaaaaatc
aagctcatcgaagctgccaagaagaggtcgagaagtcgctcacggtctgagagctcctct
cgttcgcggtcccgttcccgtggtcgctctgcatcacgctccccaagacgctcccgcagc
cctgccaaagcccacaaccgttcccgctcccgtagcggctcacctgccggcggcgcctcc
tccccgacctccaaatctaaggagcccgccaagcgctcctccaagatgagcaaatcggcg
accccgccctcccccgcgcctgcccagagagcctccgcctcccgatcccgctcgcgttca
cgctcccgctctcgttctccttctactgacagccagcgctaa
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