Oreochromis niloticus (Nile tilapia): 100707703
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Entry
100707703 CDS
T06104
Name
(RefSeq) transcriptional repressor CTCF
KO
K23195
transcriptional repressor CTCF
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
onl03000
]
100707703
03036 Chromosome and associated proteins [BR:
onl03036
]
100707703
Transcription factors [BR:
onl03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
100707703
Chromosome and associated proteins [BR:
onl03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
100707703
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_7th_ZNF462
Zf-C2H2_ZNF451
zf-met
zf-C2H2_15
zf-C2HE
Zf-C2H2_ZNF451_C
LIM
DTHCT
zf-C2H2_6
zf-WIZ
Rhabdo_M2
zf-C2H2_REST
Motif
Other DBs
NCBI-GeneID:
100707703
NCBI-ProteinID:
XP_005467150
LinkDB
All DBs
Position
LG1:complement(22568930..22576039)
Genome browser
AA seq
748 aa
AA seq
DB search
MEAEVVSMESAQATDGKVLPEGGEALTQGEVAGNMEMMVMDALDPTLLQMKTEVLEGGGT
MTVSGGDEGQIITLQVVNMEEQAGAALGLGQLQLVQVPVTTTTVDGLQATYVETSAANKD
AEPVICHTLPLPEGFQVVKVGANGEVETVEQEELQAAHEELQGTRVEEEEEDEEPAEVET
SVPPQDDPEWTKDPDYQPITAVRKGKKGKKSRLRYAEGDRDMDVSVYDFEEEQQEGLLSE
VNAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHKCHLC
GRAFRTVTLLRNHLNTHTGTRPHKCTDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYS
SVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQS
GTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSFIETGKKCRYCDAVFHER
YALIQHQKTHKNEKRFKCDQCDYCCRQERHMIMHKRTHTGEKPFACSQCDKTFRQKQLLD
MHFKRYHDPSFIPTAFVCDKCSKTFTRRNTMLRHADNCTGDATLEENGTPPPKKGRRGRK
RKMQSRRDDDDDDTEGELDEAEEEEDMLTEIEVEQAPSVVPIPAPVEPPVKRKRGRPPKS
KPDTAAIIRVEDETTGEVDDIIVKKEVGADQDDDGNEAAQEVVVGEGKSTIQMEELSQGE
GVAQAGQLSEAPPNGDLTPEMILSMMDR
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgaggttgtttccatggagtccgctcaggcgacggatggaaaggtcctgcca
gagggtggagaggccttgacacagggtgaagttgctggtaacatggagatgatggtgatg
gatgctctcgatccaactctgctacaaatgaagacagaggtgttggagggaggcggcaca
atgacagtttcaggtggagatgagggccagatcatcacgctccaggtggtgaacatggag
gagcaagcaggtgcagcattaggtctgggtcagcttcagctcgtgcaggtacctgtcaca
actacaactgtagacgggctccaggctacttacgttgagacgtcagcggctaacaaggat
gcagagccagttatttgtcacactcttcctttacctgagggcttccaggtggttaaagtg
ggtgcaaatggtgaagtggagactgtagagcaggaggagctccaggcagcccacgaggag
ctccaagggacaagggtggaggaggaagaggaggatgaagagccagcagaggtggagacc
tctgtgcccccacaagacgacccagagtggacaaaggaccccgactaccagcctattacc
gctgtccgtaaagggaagaagggaaagaagagtcgcctgcgctatgcagaaggcgatcgt
gacatggatgtttccgtgtacgactttgaggaagagcagcaggaggggctactgtcagag
gttaatgctgagaaggttgtgggcaacatgaagccccctaagcccacaaagatcaagaag
aaaggtgttaagaagactttccagtgtgagctgtgcagctacacctgcccacggcgctct
aacctggaccgacacatgaagagccacacagatgagaggccgcataaatgtcacttgtgc
gggagagcgttcagaacagtcacactgctgagaaaccacctcaacacacacacaggcact
cggccacataaatgcacagattgcgacatggcgtttgtgaccagcggtgagttagtgcgt
catcgtcgctacaagcacacacacgagaagccttttaagtgctccatgtgcgactattcc
agtgtcgaggtgagcaagttgaaaaggcacatccgctctcacacaggggagcgacccttc
cagtgcagtctgtgcagctatgccagcagagacacttataagctgaagagacacatgagg
acacattctggtgagaagccatacgagtgctacatctgccatgctcgttttacacaaagt
ggcaccatgaagatgcacatcctgcagaaacacacggagaatgtggcaaagtttcactgc
ccacactgtgataccgtcattgcacgtaaaagtgatcttggtgttcacttgagaaaacag
cattcatttattgagacggggaagaaatgtcgttactgcgatgctgtgtttcatgagcgc
tatgctctcattcagcaccagaagactcacaagaatgagaagcgtttcaagtgtgaccag
tgtgactactgctgcagacaggaacgccacatgataatgcacaagcgcacccacacgggg
gagaagccattcgcctgcagccagtgtgacaaaactttccggcagaagcagctcctggac
atgcacttcaagcgttaccacgatcccagcttcatccccactgccttcgtctgcgacaaa
tgtagcaagacattcactcgcaggaacacgatgctgcgtcatgctgacaactgtacaggc
gacgctactttggaagaaaacggaactccaccacccaaaaagggacggcgtggcaggaag
aggaagatgcagtccaggagggatgatgatgatgacgacacagaaggtgagcttgatgag
gcagaggaggaagaagatatgctaactgagatcgaggtggagcaggccccatctgttgtc
cctatcccagccccagtggaaccaccagtcaagaggaagcgtgggcgccccccaaagagc
aaaccagacacggctgctatcatccgtgtggaggacgagaccaccggagaagtcgacgac
atcattgtgaagaaggaagttggagctgaccaagacgatgatggtaatgaggccgcacag
gaggtggtggttggtgaagggaagtcgaccatccagatggaggagctgtcccagggagag
ggtgtagcacaggcggggcagctgtctgaagcccctccgaacggggacctgactcctgag
atgatcctcagcatgatggaccggtga
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integrated database retrieval system