Oreochromis niloticus (Nile tilapia): 100707706
Help
Entry
100707706 CDS
T06104
Name
(RefSeq) syntaxin-binding protein 5 isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
onl04131
]
100707706
Membrane trafficking [BR:
onl04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
100707706
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
100707706
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_RIG_2nd
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_HPS5
WD40_Prp19
WD40
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Lgl_C
Beta-prop_WDR19_1st
Beta-prop_NUP159_NUP214
EIF3I
Synaptobrevin
Beta-prop_VPS8
RAB3GAP2_N
WD40_like
Motif
Other DBs
NCBI-GeneID:
100707706
NCBI-ProteinID:
XP_025756664
Ensembl:
ENSONIG00000000654
LinkDB
All DBs
Position
LG19:20520378..20550126
Genome browser
AA seq
1187 aa
AA seq
DB search
MKKFNIRKVLDGLTAASSSSSANAQPGTPRENDVVQETLQSEHFQLCKTVRHGFPYQPSS
MAFDPVQKILAIGTQAGALRLFGRAGVECYCQHESNAAVIQLQFLINEGALVSALADDSI
HLWNLRQKIPAILHSLKFNRERITYCHLPFQSKWLYIGTERGNIHIVNVESFTLSGYVIM
WNKAIELSTKTHPGPVVHISDNPMDEGKLLIGFESGIVVLWDLKCKKADYRYNYDEAIHS
VAWHHEGKQFVCSHSDGTLTTWNVRTPAKPAQIITPHGKQPKDGKKPEPCKPILKVEYKT
TRAGDPFMVLSGGLSYDTVGRRACLTVMHGKSTAVLEMDYPIVDFLTLCETPYPNDFQEP
YAVVVLLEKDLVVIDLGQIGYPIFESPYPLTIHESPVTCCEYFADCPAEVIPALYSVGCR
QKRQGYSKKEWPISGGNWGQGTQTYPEIIITGHADGSIKFWDASALMLQVLYKLKTAKVF
ERARGKEEKPNTDIVDEDPFAIQTLSWCPESRMLCVAGVSAHVIVYRFSKQEITTEVVQL
LEVRMQSEFSDVDSPDPGGEQTPTLPTPGASSSPQESELPTQPSTGSNSSDGPRDNIPCL
QMRSSPLKQSPGYQVELVIQLVWVSGEPPQQITSLAINSSYGLVVFGNSNGLAVVDYLQK
TLLFHMGTSELYSPSDPFQRQPRSPRKAKPSGAICDSNDGSNASEDRCRSPTSGSTSPCN
SDDDKKQKFIEKVKLKSRRFSKTVANDFAKMSRKISSSSEPKTDLEKGGFQRRRTQTCKK
QLCCVKRTATARMNLKEDLCRTKSDPIFYAKDNSFTRSRSSSVTSIDRESREAISSFYYC
ESFPRKTDSLVSPCLLVGTTHGSVMMVALNLPPAGDQRLQQPVGIASCGTLVKLKGGILT
MSLLDATGTLLPPSFEQWYDPNASDEEKEKGRKRRPASPPSSQESQDTHFAILCSEKQAK
VVALPSQTRIYKHSITETSFVLRADVVQMAGANCIACFCANGHIMTLSLPSLRPLLDVNY
LPLTDMRIARTFCFSNLGQALYLTSPTEIQRITYSQETCDNLQEMLSELFTPVETPEAPN
RGFFKGLFGGGAQSLDREDLFGETAAGKASRSLAQHIPGPGNMEGMKGAASGVVGDLARA
RIALDERGQKLGELEERTAAMMASAESFSKHAHDMMLKYKDKKWYQL
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtttaatattcggaaggtgctggacggcttgacagcggcttcttcctcctcc
tccgcaaatgctcagccgggtactcccagggaaaacgatgttgtccaggagactttacag
tcggaacatttccagctttgcaagactgtgcgtcatggctttccatatcaaccatcctca
atggcttttgaccccgtacagaaaatcttggccattgggactcaggctggagctttgagg
ctctttggccgtgcaggggtggagtgctactgtcagcacgagagcaacgctgctgtcatc
cagctccagttcctgatcaacgagggggcgctggtgagtgccttagctgatgacagcatc
cacctgtggaacctgaggcaaaaaatccctgctatcctgcattcgctcaagtttaacagg
gagagaatcacatactgccacctgcccttccagagcaaatggctgtacatcggcacagaa
agaggaaacatccacattgtcaacgtggagtccttcactctctcaggctatgttattatg
tggaacaaagccatcgaactatccaccaagacacacccagggcctgttgtgcacatcagt
gataaccccatggatgagggcaagcttctgattggatttgagtccgggatagtagtgctg
tgggatttgaagtgcaaaaaagctgactaccgctacaattatgatgaggcaatccactca
gtcgcctggcaccatgagggcaaacagtttgtttgcagccactccgatggcactttgacc
acatggaatgtacgaaccccagccaagcccgcacagatcatcacaccacatggaaagcag
cctaaggatggaaaaaagccagaaccatgcaagcctatcctgaaagtggaatacaaaaca
acaagggctggggacccattcatggtgctgtctggaggtctgtcttacgatacagtgggg
aggagagcctgtctgactgtgatgcacggaaagagcactgctgttctggagatggactac
ccgattgtggatttcctaacgctgtgtgaaactccatatccaaatgactttcaggagcct
tatgctgtggtcgtccttcttgagaaagatttagttgtaatagacctcggacagattggg
tatcccatatttgaaagcccttatcctctgactatccacgagtcaccggtgacctgctgc
gagtattttgctgactgtcctgctgaagttattcctgcactttactctgtcggctgtcgg
caaaagaggcaaggttacagtaagaaggaatggcccattagtgggggaaactggggccaa
ggcacacagacttaccctgagatcataatcacaggacatgctgatgggtcaatcaaattt
tgggatgcttctgcactaatgcttcaagtgctgtacaagctgaagactgccaaggtgttt
gagagggctcgtggaaaggaggagaagccaaacacggatatagtagatgaggacccattt
gccatccagaccttgtcctggtgtcccgagagccggatgctttgcgtggctggtgtatcg
gctcatgttattgtctataggttcagcaaacaagaaattaccactgaagttgttcagctc
ttggaggtgcgaatgcagtctgagtttagcgacgtggactctcctgacccaggaggagag
cagacccccaccctgccaaccccgggagcttcctccagccctcaggagagtgagcttccc
actcagccatcaacagggagcaactcctctgacggcccccgagacaatataccatgtcta
cagatgcggagctccccactgaagcagtctccgggctaccaggtggaactggtgatccag
ctggtgtgggtgagtggggagccacctcagcagatcaccagcctggcaatcaattcctcc
tatgggcttgttgtatttggaaacagtaacggtctggctgtggtggactacctccagaaa
accctgcttttccatatgggcacatcagagctgtacagcccatctgacccctttcagagg
cagcctcgctccccacgtaaagcaaagccttccggagcgatttgtgattccaacgatggg
tccaatgcctcagaggaccgctgcagatcacctacttcaggctctacctcaccctgcaat
tcagatgatgacaaaaagcagaagttcatagagaaggtgaagttgaaaagcaggcgcttt
tccaagacggttgccaatgactttgccaagatgtcacggaaaattagctcgtctagtgag
ccaaagactgacctggaaaagggtgggttccaacgaaggcgcactcagacatgtaagaag
cagttgtgttgtgtgaaaagaacggcaacagccaggatgaacctgaaggaggacctctgt
agaactaagtcagaccccattttctatgccaaggataactcattcacccgctcacgcagt
tcaagtgtaaccagcatagaccgagaatctcgagaggccatctcctccttttactactgt
gagagttttccaaggaagacagacagcctggtcagcccctgtctgctggtggggaccacc
cacggctcggtgatgatggtggccctcaacctgccacccgctggagaccagaggttacag
cagccagttggcattgcgtcttgcggcaccctggtcaagctcaaaggaggcattttaact
atgtccctgctggatgcaactggaactctgctgcccccttcatttgagcagtggtatgac
ccaaatgcttcagatgaagaaaaagagaagggtcggaagcgaaggccagcctctcctccc
tcgtcacaggagagccaggatactcactttgccatactgtgttcggagaaacaggccaag
gtggtggccctgccctcccaaacccgcatctacaaacacagcatcacagagacctccttc
gtgctgagggctgatgttgtgcagatggctggggctaactgcatcgcctgtttctgtgct
aatgggcatataatgactctgagtttacccagtctacggcctcttctggatgtcaactac
ctgccgctcacagacatgaggatagctagaacattctgcttctccaacctgggtcaggct
ttgtatctcacctcccctactgagatccaaaggatcacctacagccaggagacctgtgac
aacttgcaggagatgctcagtgagttatttaccccagtggagacaccagaggctccaaat
agaggtttcttcaaaggcctttttgggggaggagctcagtctctggacagggaggacctc
tttggagaaacagctgcaggtaaggcgtctcgtagcctggcgcagcacatccctggccca
ggcaacatggaaggcatgaagggggccgcatcgggagttgtgggagaccttgcccgtgcc
agaatagctctggacgagagagggcagaagctgggcgagctggaggagagaacagcagcc
atgatggccagcgcagagtccttttccaaacatgcgcatgatatgatgctgaaatacaaa
gataaaaagtggtaccagctctga
DBGET
integrated database retrieval system
