Oreochromis niloticus (Nile tilapia): 100707779
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Entry
100707779 CDS
T06104
Name
(RefSeq) laminin subunit beta-1 isoform X2
KO
K05636
laminin, beta 1
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04510
Focal adhesion
onl04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100707779
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100707779
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Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
DUF3813
Motif
Other DBs
NCBI-GeneID:
100707779
NCBI-ProteinID:
XP_005465990
Ensembl:
ENSONIG00000017383
UniProt:
A0A669B945
LinkDB
All DBs
Position
LG7:complement(1584931..1609855)
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AA seq
1793 aa
AA seq
DB search
MFHLQLALLLGLQVFTCAQESGATDDIGQPELSDVCTEGSCYPATGDLLIGRAHQLSSTS
TCGMNRPEPFCIVSHLQEEKKCFVCDSSEPYDELANRTDSHRIENVVTTFAPNRLKTWWQ
TENGMENVTIQLNLEAEFHFTHLIMTFKTFRPAAMVIERSADFGKTWQVYRYFAYDCESS
FPSVYRGPMRKVDDVICDSRYSDIEPSTEGEVIFRVLDPAFRIDDPYSPRIQNMLKITNL
RVKFTKLHTLGDNLLDSRMEIKEKYYYAIYDMVVRGNCFCYGHASECAPIEGAGQITEGM
VHGHCLCNHNTKGLNCEQCQDFYHDLPWRPAEGRNTNACKKCNCNQHSDSCHFDAAVFAA
SGNVSGGVCDDCEHNTAGNNCEQCKPFYYQHPERDIRDANICQPCDCDPVGCLNGGLCDS
TTDVRAGLIAGQCRCKANVEGERCERCKPAHFGLSDEPEGCKACTCSPLGTLPGGNPCDR
ETGSCFCKRLVTGRDCDQCVPEHWGLSNDMDGCRPCDCDLGGAINNQCDHMTGQCVCRDH
MFGRRCDQVESGFYFIALDHYTYEAEDANFGPGVTVVQRPHPQDRSPTWTGIGLANVPEG
AFLEFTVDNVPHSMEYDILIRYEPQLPDVWEEVLMAVMRPRPIQPDSRCINTVPDDDNQM
ISLHPSSRYVVLPRPVCFESGLNYTIRLSLPLYATFGDVQVPYTLIDSIVLMPHCKNLEI
FTGSEGGDSGGNVAWETFQRYRCLENSQSVIKTPMTDICKNFIFSISAMLHQGAKECHCD
PQGSLSTVCDPHGGQCECRPNVVGRNCDRCSPSTFQFGPNGCRVCGCDPQGSLSVFCDQL
TGQCSCVSGAYSRQCDRCLPGHWAFPTCRPCSCNGHADVCDPDSGRCIDCRDHTMGRACD
RCLDGYYGDPTLGSGDHCRPCMCPDGPGSPRQFAGSCYRSDDSQQVTCVCNTGYKGTRCD
ECSPGYYGNPEEVGGQCQPCQCNNNIDMLDPESCDARNGKCLRCLYHSEGAACQSCTLGY
YGNALLQDCRKCVCNRLGSVPSSCPSSECHCDRSSGQCHCLSNVVGQHCDRCAPDTWNMA
TGIGCQTCDCDPKHSYRTSCNEISGQCSCHTGFGGRTCSECKELFWGDPEIKCHACDCDP
RGISEQQCNKVSGHCVCVEGVSGPRCDTCARGFSGTFPNCSRCHKCFAEWDNIIGQLTNQ
THRLVNKVNALKASGANGPYRKSIESMERSVADIQAILDGNPASQPLTEIQELLQEASDL
MGALSHTLNLTEQTVVQVEDLDSAAGTKLDTVMSAAQKLEGTVQELLDQVEFIKNSDIRG
ATDSITKYFLQSQEAEVQANTSTIDSGSPVEASAALRQLTEDKLNQTREEFLKRQSEHAQ
KLDDLAGELQSLDLAELSSKTCGSPSLGQDACGSSSCGGLGCVNPEGRARCGGEGCSGVV
ATANSVLRKARDSEQEIVHAMEEVEKLSKMVSEAKLQADKARLSAQNVLMKTNRTKQKVD
QSNEELRSLIRHIRDFLTQDAADLESIELVANEVLAMQMPTTPAQLQNLTDEIRQKVGEL
GHVENILQESADDIQRAEKLLDEARQASEEARDVRDSVEKVKQALEEAQRAKTAASSAIQ
QATANIHNTSHLLSSVESETADAELKLSNATQRLQKLEQDVMLLKDKAANVTLSAKLTNQ
ESVSIRSMAEELKKELDGELKEKYAIVEQLIGQKTGGMVDAKKRAQSLQQEAKELLLQAS
DKLQLLKDLEKSYEDNERALEQKAEQLVELEAAVKGLLQEISHKVTVYSTCVF
NT seq
5382 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaccttcagctcgcgctgctgctcggtctgcaggtatttacctgtgctcaggag
agtggggccacggatgacatcggccaacccgagctcagtgatgtgtgcactgaaggcagc
tgttacccagcaacaggagaccttctgattggcagagcccatcagttgtcgtccacctcc
acctgtggaatgaaccgacccgaaccattctgtatcgtcagccacctgcaggaggagaag
aagtgctttgtgtgcgactcatcggagccctacgacgagctggccaatcgcacagacagc
catcgcatcgagaacgttgtcactacgtttgccccgaacagactgaagacctggtggcag
actgagaatggtatggagaacgtcaccatccagctcaacctagaggctgagtttcacttc
acgcatctcatcatgaccttcaagacgtttcgacctgctgccatggtgattgagcggtca
gctgacttcgggaagacgtggcaggtttaccgttacttcgcttatgactgcgagtcgtcc
ttcccgtccgtttaccggggtccaatgaggaaggttgacgatgtcatctgtgactcgcgt
tactctgacattgagccatccactgaaggagaggtgattttcagagttttggatccagcg
ttcaggatcgatgacccgtacagtccccgaatccagaacatgctgaagatcaccaacttg
agggtaaagttcaccaaactgcacacgcttggagacaaccttctggactctcgcatggag
atcaaagagaagtactactacgccatctacgacatggtggtccgaggaaactgcttctgc
tacggacacgcctctgagtgcgcccccatcgagggagctgggcagataacagagggcatg
gttcatggtcactgcttatgtaaccacaacactaaaggtctaaactgtgaacagtgccag
gacttctaccacgacctcccctggagacctgcagagggacgcaacaccaacgcctgcaag
aagtgtaactgtaaccagcactcggattcgtgtcactttgacgcggcagtcttcgcggct
tcgggaaacgtgagcggaggagtttgtgacgactgtgagcacaacacggctggaaacaac
tgtgagcagtgcaaaccgttttactaccagcatccagagagggacatcagagacgccaac
atctgccagccctgtgactgcgaccccgtgggctgtctgaacggaggactctgcgacagc
acaacggacgtccgagctgggctgatcgccggtcagtgccgctgtaaagcaaacgtggag
ggagaacgctgcgagcgctgcaagccggcgcatttcgggctgagcgacgagcccgaaggc
tgcaaagcttgtacctgcagtccgctgggaactcttcctggaggaaacccctgtgacaga
gaaacaggaagttgtttctgtaaacgtctggtgaccgggcgagactgtgaccagtgtgtg
cctgaacactggggtctcagtaatgacatggatggctgcagaccatgtgattgcgacctc
ggaggcgccatcaacaatcagtgtgatcacatgactggtcagtgcgtctgcagagatcac
atgttcggccgccgctgcgatcaggtggagtctggattctacttcatcgctctggatcac
tacacctacgaggctgaggatgcaaattttggacctggagtgacggtggtccagagacca
caccctcaggaccgtagtcccacctggacaggcatcgggctagccaatgtaccagagggg
gccttcttggagttcactgtagacaacgtccctcactcaatggaatatgacatcctgatc
cgctacgagccgcaactgccggatgtgtgggaggaggttctgatggcggtgatgagaccc
agaccgatccagccggacagtcgctgcatcaacacggtgcccgacgacgacaaccagatg
atctcgcttcacccgagttcacggtacgtggttcttcccagaccagtttgttttgaatcg
ggtctgaactacacaatccgcctcagcctgccactgtacgctacctttggggatgtccag
gttccgtatacgctgatcgactcgatcgtcctgatgcctcactgtaagaacctggagata
ttcacaggctcagagggcggggactcgggcgggaatgtcgcctgggagactttccagcgt
tatcggtgcctggagaacagccagagcgtcatcaagactccgatgactgacatctgcaaa
aacttcatcttcagcatctccgccatgttgcaccagggagctaaagaatgccattgtgac
cctcagggctcgctcagcaccgtgtgcgacccccatggtgggcagtgtgagtgccgcccc
aatgtggttggcaggaactgtgacaggtgttctccgtccacattccagtttggacccaac
ggctgccgagtgtgtgggtgcgaccctcagggttctctcagtgtgttctgcgatcagttg
accggacagtgttcctgtgtttcgggcgcgtacagtcggcagtgcgaccgctgtctgccg
ggtcactgggctttccccacctgccgcccctgctcctgtaacggtcacgccgatgtctgc
gaccccgacagcggccgctgcatcgactgccgggaccacacgatgggacgtgcctgtgac
aggtgtctggatggttactatggtgacccaacactggggtcaggtgaccactgtcgtccc
tgcatgtgtcctgacggccccggcagcccgcggcagtttgcaggaagttgttaccgcagc
gatgactcccagcaggtcacctgcgtctgcaacacaggatacaaaggtactcgctgtgat
gagtgctcgcctggttactatggaaaccctgaggaggtgggtggacagtgtcagccgtgt
cagtgcaacaacaacattgatatgctggaccccgaatcgtgcgatgcccggaacggcaag
tgtctgcgctgcctgtaccacagcgagggtgccgcctgccagagctgcacgctgggttac
tatggcaacgccctactccaggactgcaggaagtgcgtttgtaaccggctcggcagcgtt
ccctccagctgcccgtcctccgagtgtcactgtgaccgcagcagcggtcagtgtcactgt
ctatccaatgtggttgggcagcattgcgaccgctgcgcgcctgacacctggaatatggcg
acgggcatcggttgtcagacctgtgactgtgaccccaaacactcgtacaggacgtcctgc
aacgagatcagcggtcagtgttcctgccacaccggcttcggaggaagaacgtgcagcgag
tgtaaagaactgttctggggagacccagagatcaaatgtcacgcttgtgactgtgaccct
cgcgggatctccgagcagcagtgcaacaaagtcagcggtcactgcgtgtgcgtggagggt
gtgtccgggccgcgctgcgacacttgcgctcgcggattctcgggaactttccccaactgc
agccgctgtcacaagtgcttcgccgagtgggacaacatcattggccagctgaccaatcag
acacaccgcttggtcaacaaggtaaacgccctcaaagctagcggtgccaacgggccgtac
aggaagtccattgagagcatggagaggagcgttgccgacatccaggccatcctagatggg
aatccggcatcacaaccgctaacagagatccaggagctgctgcaggaggccagtgacctg
atgggagccctgagccacacattgaaccttactgaacagactgtggtccaggtggaggac
ttggactctgctgcaggaactaaactggacactgtgatgtcagcggcacagaaactggag
gggacagtccaggagctcctggaccaggtcgagttcatcaagaactccgacatcagaggg
gcaacagacagcatcactaagtacttcctgcagtcccaggaggccgaggtccaagccaac
acctccaccatcgacagcggcagcccggttgaagcctctgctgctctacggcagctcaca
gaagacaaactgaaccagacccgagaggagttcttgaagagacagtctgagcatgctcaa
aaactggatgacctggcgggagagctgcagagtctggacctagcagaactcagcagcaag
acctgtggcagtccatctttgggtcaagacgcatgcgggtcttcttcctgcggtggtctg
ggctgcgtgaatcctgagggcagggccaggtgtggaggagaaggctgtagtggtgtggta
gcaacagccaacagtgtcctgaggaaggctcgggactctgaacaggaaattgtccatgcc
atggaggaagtggagaagctgtctaagatggtgtcagaagcaaagctacaggcggacaag
gccaggctgagtgctcagaacgtcctgatgaagaccaacaggaccaaacagaaagttgac
cagagcaacgaggagctgcgcagcctcatcagacacatcagagacttcctcacacaggat
gctgcagatcttgagagcatcgaacttgtggcaaacgaggttctggccatgcagatgcca
accacgccggctcagctgcagaacctgaccgacgagatccggcagaaagtgggagaactg
ggacatgtggaaaacatcctgcaggaaagtgccgatgacatccagagggccgagaagctg
ctggacgaggctcgccaagctagcgaggaggcacgtgatgtcagagactctgtggagaaa
gtgaagcaagcactggaagaagctcagagagctaagacggccgccagcagtgccatccag
caggccaccgccaacatccacaacaccagccacctgttgtcctctgtggagtcggagacg
gcagatgctgagctaaagctttcaaatgccacccagaggctgcagaagctcgaacaggat
gtgatgctgctgaaggacaaagctgcgaacgttactcttagtgccaaactgaccaatcag
gaatcagtgagcatcagaagcatggcagaggagctgaagaaggagctggacggggagctg
aaggagaagtacgccatcgtggagcagcttattggtcagaagacgggaggcatggttgat
gccaagaagagggcacagtcacttcagcaggaagccaaagagctgctgctgcaggccagt
gacaagctgcagctgctgaaagatttggagaagtcttatgaagacaatgagcgtgctctg
gagcagaaggcggagcagctggtggagctggaggcagcagtgaaggggctgctgcaggag
atcagccacaaggtgaccgtctacagcacctgcgtgttctag
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