Oreochromis niloticus (Nile tilapia): 100707806
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Entry
100707806 CDS
T06104
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 2 isoform X1
KO
K05046
solute carrier family 6 (neurotransmitter transporter, GABA) member 13
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
100707806
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
onl02000
]
100707806
Transporters [BR:
onl02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
100707806
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Gene cluster
GFIT
Motif
Pfam:
SNF
DUF7134
Motif
Other DBs
NCBI-GeneID:
100707806
NCBI-ProteinID:
XP_005451684
Ensembl:
ENSONIG00000011558
UniProt:
I3K0B2
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Position
LG17:complement(12124052..12140707)
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AA seq
630 aa
AA seq
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MTEETTGNVPAADSEADKQAPEEGALSREKWANNMEFILSMAGEIIGLGNVWRFPYLCFK
NGGGVFLIPYCVFLFFCGIPVFFLETALGQYTSEGGVTAWRKICPMFQGVGFASQVIVIY
LNIYYIIVLAWAIFYLINSFKSPLPWSTCDNWWNSDLCHSRMSIFANPQLFQAGSNWSFL
HNVTSMDYYENTTYNETILMSTSPEEEFWSNRVLRISENMSLGKIHWDLALCLMFAWIIC
YFCIWKGIKTTGKVVYFTATFPYLMLFVLFIRGVTLPGAGEGLKYYLKPDFTRLSDPDVW
RDAGTQVFFSYAVCQGVLTALGSYNKYNNNCYRDCLALCCLNSATSIFAGFAVFSVLGFM
AQDLNISLEEISAGGPGLAFIAYPTALSLLPGSSFWAVLFFFMLLLLGLDSQFVCVESLA
TALTDLFPRYLRRPRAREILVLVIAIVCFCLGLPFITEGGIVLFQLVDTYGPSGTSLLFI
ACAETIVIGWVYGADRFYDNIEDMIGYPPFPVLKYCWLFFTPLICGLTLLYNLVQSQPLV
VYGFEPGTWGVTLGSVLVLTPLICIPVFILVSLYRDPKNMSTPSSDLRQSRPHNPALTLF
NYVIVKAQGQPDIRVDYREDKLVMEEPGSA
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgactgaggaaacaaccgggaatgttcctgctgcagactctgaggcagataaacaggct
cctgaggaaggggctctgtcgagggaaaaatgggccaacaacatggagttcatactctct
atggctggtgaaataattggcctcggaaatgtttggcggttcccctacctgtgcttcaag
aacggaggaggtgtcttcctcatcccctactgcgtgttcctcttcttctgtggcatcccc
gtgtttttcttggagacagcgctgggacagtacaccagtgagggtggggtgactgcctgg
aggaaaatatgtcccatgtttcagggggtggggtttgcgtcccaagtgattgtgatctat
ctgaacatatactacattattgttttggcatgggctatcttctacctaataaactccttc
aaaagtcccctgccctggtctacatgtgacaactggtggaactctgacttgtgccacagt
cgcatgagcatctttgcaaacccccaactctttcaggccgggtccaactggtcattctta
cacaacgtcacctcaatggactactatgagaatacaacttacaatgaaacaatattgatg
agcacgtcaccagaagaggagttctggagtaaccgtgtgttaagaatatcagaaaacatg
tctttgggtaagatacattgggatctggctctgtgtcttatgtttgcctggatcatatgt
tacttctgcatctggaagggaatcaaaacaactggaaaggtggtgtacttcactgctaca
tttccctacttgatgctctttgtgctcttcatccgtggagtgacgctcccaggagctgga
gagggcctgaaatactaccttaagcccgacttcaccagacttagtgatccagatgtgtgg
cgtgatgcagggactcaggtgttcttctcctatgctgtttgtcagggagtgctgacggct
ctggggagctacaacaaatacaacaacaactgctacagggattgcttggccctgtgctgt
ctgaacagtgccaccagtatctttgcaggctttgctgtattctcagtgctgggattcatg
gctcaggaccttaacatttcactggaagaaatttcagctggtggtcctggtttagccttc
attgcctatcctacagctctgtcgttgcttcctggttcgtccttttgggctgtgctcttc
ttcttcatgctccttttgctcggcctagatagtcagtttgtgtgtgtggaaagcctggcc
acagccctcacagacctgtttccacgttatctgaggaggccgcgtgccagagagatattg
gttctggtcatcgctattgtttgcttctgtttggggctgcccttcattactgaaggcggg
atcgtcctcttccagctggttgacacatatggtccaagtggaaccagcctcctctttatt
gcttgcgcagagaccattgttattggctgggtatatggcgcggaccgtttctatgacaac
attgaagacatgattgggtatcctccgttccctgtgctgaagtactgctggctgttcttc
acgccgctcatttgcgggcttacattgctgtataacctggtacaaagtcagcctcttgtt
gtatatggttttgagcctggcacctggggagtcacactgggctctgtgcttgttcttaca
cccctgatatgcatcccagtattcattctggtctcactatatagggatccaaaaaacatg
agtacaccatccagtgacctgcgccagagtcggccacacaacccagcgctcacattgttt
aattatgtcatagtcaaggcacaggggcagccagacatcagggtggactatagagaagac
aagctggtaatggaagaacctggtagtgcttga
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