Oreochromis niloticus (Nile tilapia): 100707828
Help
Entry
100707828 CDS
T06104
Symbol
clstn3
Name
(RefSeq) calsyntenin-3 isoform X1
KO
K22661
calsyntenin 3
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
onl04515
]
100707828 (clstn3)
Cell adhesion molecules [BR:
onl04515
]
Cadherins
Cadherin related
100707828 (clstn3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_2
Laminin_G_3
DUF5570
Motif
Other DBs
NCBI-GeneID:
100707828
NCBI-ProteinID:
XP_013130095
Ensembl:
ENSONIG00000012983
UniProt:
A0A669BF10
LinkDB
All DBs
Position
LG11:23416619..23447344
Genome browser
AA seq
956 aa
AA seq
DB search
MDRMNFLSFLLLCLTSVAIGNKANKHKPWIETEYQGIVMENDNTVLLNPPLFALDKDAPL
HYAGEICGFRVHNGPSGSGSVQFEAVVLDRSTGEGLVRSKEPLDCESQREHSFTIQAYDC
GEGPDGVNSKKSHKATVHVRVNDVNEFSPVFVERRYEASVSEGRLFDRIVRVEALDADCS
PQYSQICFYDIITPNVPFAIDNDGNIKNTEPLDSKRQRVHTFWVTAFDCGKNRAQADAQV
VVTVKPSCKPGWIGWTKRVEYTPGSGSIPLFPSLHLETCEETVWNIQATVELQTGHIGKG
CDRDSYSDRSVRRLCGAVRGEVDLLPPPSPAANWTSALPTLPSSDSSLIFSFNGSNHVAV
VPDSVVSALSGDHFTLQLWMRRGGANIQPATTQTRGSRKEEETIVCSTVRNDDSFSHYSL
SVHGCRLSLFYWPDVSAARPVKFLWKLEQVCDSEWHHLSLSVQFPSVTLYVDGVTFDPAL
IHDNGAIPNPAPRQRMFIGACWEPEEKQKEILNNTIPEGKDSVKYVGSYHGLLSGVTVRP
GSVEPHSVVECLYACREGLDFGDLETLGSGMKVHVNPSQSVLVLEGDDIESFNRAVQQVT
YRNSLRFATPGVRPLKLTTSLRCFNEESCLSLKQLEGYLVVLQPDAPQISLSGVGPHLAR
PAPEFEGPRGVPLFPELRIVCSLSHAVNTAAQGMEGGALMSDAVAHTLDGCEVQPLGEEL
NPEREELLVDMDVVRERGLEIINTTAYIAITGAESISVYEDVLRSVRYRLAKGSARFERR
FRLSCSEMNGRYTSNELTLEVNFLHSLDSLYHPSHLLASQQQFLHPSHHAGELSGHTLPN
PHRNSVVPGAATVIIMVCVGFLVVMVILGVFRIRSIHRRGEGARGGAKEGSSQWDDSALT
IIVNPMESYESRMGISADTEGEGEEDEEVAESPDDASDDQRIIIKKEGRDGNARRY
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atggacagaatgaattttctctccttcctcctcctttgcttgacttcggttgccattggc
aacaaagccaataagcacaagccatggatcgagacagagtaccaggggattgtcatggag
aacgacaacaccgtgctgctcaatccccctctctttgccctcgacaaagatgctccactt
cactacgccggtgaaatttgtggcttccgggtccataatggcccctcgggatccggttca
gtccagtttgaagctgtggtcctggaccgctccaccggtgagggtctggttcggtccaag
gagccgctggactgtgagagccagcgggagcatagcttcaccatccaggcctacgactgc
ggagagggacctgatggagtcaacagcaagaaatcccacaaggccaccgtgcacgttcgt
gtaaacgacgtcaacgagttctcccccgtgtttgttgagcgccgctacgaggcctcggtc
tcagaagggcgtctgtttgaccgaatcgtacgcgtggaggctctggatgccgactgctcc
ccgcagtacagccagatttgcttctatgacatcatcactcccaatgtgccctttgctatt
gacaacgacggaaacattaagaacacagagccgttggattcaaagcggcagcgcgttcac
accttctgggtgacagccttcgactgtggaaagaaccgcgctcaggctgacgctcaggtt
gttgtcacggtcaagccgtcctgcaaacccggctggatcggatggaccaagcgtgtggag
tacacccctgggtcaggcagcatccctctgttccccagcctgcatttggagacctgtgaa
gagaccgtgtggaacatccaggccaccgtagagctccagaccggccacatcgggaaaggc
tgtgacagagacagctactccgacagatctgtgcgacgtctgtgtggtgctgtcaggggt
gaagtcgacctgctcccacctccgtctcctgccgctaactggacttcagcgctgcccact
ctcccgtcttctgactcatctctgatcttctccttcaacggctccaaccacgtcgctgtc
gtgcccgactcggttgtgtccgcgctatccggcgaccacttcaccctccagctgtggatg
cgcagaggtggtgccaacatccagcctgcaaccacgcaaaccagaggaagtcgcaaggag
gaggagactattgtctgcagcaccgtcaggaatgatgactccttctcccattactccctc
tccgtccacggctgccgcctctccctcttctactggcccgacgtctcagccgctcgcccc
gtcaagttcttgtggaaactggagcaggtgtgtgacagcgagtggcatcatctttcactc
agcgtccagttcccatcagtgaccctttacgtggatggagtgacctttgaccccgccctc
atccacgacaacggagccatcccgaaccccgccccgcgtcagcgcatgttcatcggtgcc
tgctgggagcctgaggagaagcagaaggagatactaaacaacaccatcccagagggtaaa
gactcagtgaagtatgttggcagttaccatggcctgttgtctggggtgacggtgcgtcct
ggcagcgtggagcctcacagcgtggtcgagtgcctgtacgcatgcagggaggggctggac
tttggcgacctggagactttgggctctggcatgaaggttcacgtgaaccccagccagtct
gtgttagtgctggaaggagacgacatcgagagctttaaccgtgcagtgcagcaggtcaca
tacagaaactctctacgcttcgccacccctggcgttcgtccgctcaagcttaccacctcc
ctcagatgtttcaacgaggagagctgcctgtccttgaagcagctcgaaggatacttggtg
gttctccagcctgacgctcctcagatctctctgtctggggttgggccgcatctggcccgt
ccagctcctgagttcgaaggtccccgcggcgtccctctcttccccgaactccgtatcgtc
tgttccctgtctcatgctgtcaacacagctgcacaagggatggagggtggagctctgatg
tccgatgctgtcgctcacactttggatggctgtgaggtccaaccactgggggaggagcta
aatccagagagagaggagcttctggtagacatggatgtcgtgcgagagagaggactagaa
atcatcaatactactgcttatattgccatcacaggtgccgaatctatctctgtgtatgag
gacgtccttcgctctgtccgctaccgactggctaaaggctcggctcgctttgagagacga
ttccgcctgtcctgttctgagatgaacggcagatacaccagcaacgagctgactctggag
gtgaacttcctccactctttggacagtctgtaccacccgtcccacctgctcgcttcccag
cagcagttcctccatccgtcccaccatgctggagagttgagtggacacaccctacctaat
ccacatcgcaactcagtggtcccaggagcagccaccgtcatcataatggtgtgcgtaggt
ttcctggtcgtgatggtgatcctgggagttttccgaatccgctcaatccatcgccgtggc
gaaggagccagaggcggggctaaggagggtagcagtcaatgggacgactctgcgctcacc
atcatcgtcaacccaatggagtcctacgagtctcgtatgggcatctctgccgacacggag
ggcgagggggaggaggatgaggaggtagcagagtcgcctgatgacgcgagcgatgaccag
cgaatcatcatcaagaaggagggcagagacggcaacgcccgccgctactga
DBGET
integrated database retrieval system