Oreochromis niloticus (Nile tilapia): 100708048
Help
Entry
100708048 CDS
T06104
Name
(RefSeq) laminin subunit beta-4
KO
K06245
laminin, beta 4
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04510
Focal adhesion
onl04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100708048
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100708048
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
EGF_LMN_ATRN
LAMININ_IV_B
LAMB1
LAMB4
ALKBH8_N
RVT_1
Sortilin-Vps10
DUF948
Motif
Other DBs
NCBI-GeneID:
100708048
NCBI-ProteinID:
XP_019217539
LinkDB
All DBs
Position
LG7:complement(1614509..1690637)
Genome browser
AA seq
2124 aa
AA seq
DB search
MIFHFFIAFLPAVRLQDYKDFQDPCPISSCNPQVGDLLVGRAAQLSASSTCGLDGPQNYC
IIGYLEEGQKCFICDSQLPYHRYNSPNSHRIENVITNFDLERKLKWWQSENGVHHVSIQL
NLETMFQFSHLVLTFKSFRPAAMLVERSKDFGRSWKVVRYFAEDCSLHFPSVSTAPARSI
DDVVCDSRYSGSEPSSDGEVVLKALDPVFKTENPHAPNIQDLTTVTNIRVNFTRLFTLGD
TLLSRRRRNPQDKYYYSVYNMVVQGSCFCNGHASQCVPMAGVRWDIFTQPGMVHGQCVCQ
HNTAGENCERCQDFHHDSPWRPGGEGAADICRACKCHGHSDSCHFDAARYKATGGVSGGV
CDDCGNNRMGPQCEQCRPFLYQDLQRAKDDPHACIPCNCDPVGSRDGGQCDSLSGQCVCK
ENVEGQRCDRCKHGFFSLRQDDPAGCQACRCHPLGSVGSCDQLTGTCECDQMASGPLCDQ
CLPGFWGLGNSVFRCSPCNCDIGGAQGHTCSPEDGQCRCLPNMIGRRCSDPAPGYFLPPL
NYFLYEAELTFPLLGGNSSTTSPPPSPSSSAAPSSSSLVCNRTIQPLPVIWHCPSLPEIS
NNSSESTTISGLNDYRLIALTSVVAKFFKKLVLKHIKDCITPSFDPHQFAYKANTSTEDA
ISTALHSALHHLENPGTFVRMLISDFSSAFNTIISDILIAKLRSSTQHWLTTGMCATLMG
LITDDDDTAYRDEIQRDYVERVSSFKFLSTHISEDLYWTTNTSALVKKAQQHLHFLRVLR
WNRLQSDLLFSFYRTTIDSVLVHAIPVWYAGCTTANKKRLQRVIRTAEKMIGCPLSTLDS
IASSRCLSRAGAIIKDRLHPNHHLFNILPSGKRFRSIRYKTNRLKSSFFPWLNPGVLPQC
EQYFKEQGFDTKFQNGRVILVRQAQQLAQRQKRRKRLQQTSIPLVPGYTLQIIPCQRAYH
QPVTWTGLGLVRVFEGVGLRFTVDNLPSSTDYQLVISYELESASDWMALVSIIKVSQGDG
GCSSSPTGSKTLILPGNSRRGILDSLLCLNAGGHYFVDITFYKQPRSDGSHILIDSISLF
NRIGSVQNFCSQSDLDTFHQFHCTGLTVKLGPQESLPEVCEGLIMSLSAQIHNGAVLCRC
NVIGSIGPSCSKLGGFCQCKANVIGRCCDACAPVTFGFGPEGCKRCDCDPHGSVSELCDQ
VSGQCACRSETAGQRCDRCQMGFWGFPSCRSCECNGLSEMCDGLTGDCLSCREHTTGPSC
ERCVEGYYGDPISRQACQLCLCPDVLSSGRFFATSCQHDPQSLRLICNCQEGHTGVSCDR
CSPGFYGDLTLPGAVCKECPCNNNINPDDPNSCNSRTGECLHCLHNTIGLHCQNCKPGYY
GNALTQDCKECSCDRRGTQVTRCPLGRPCFCDLRTGQCPCRTGVIGKLCDECEDRYWNLN
IASGCQPCSCDPVNSISNICDKVTGRCPCHPEFGGRHCDECRENHFRNPDLQCIPCDCNP
EGTKRPSCDPETSECICRAGVTGIFCDECAPGFNTLFPACEQCHPCNALWTQIVTDVQQA
AQKITTLIPHNNMQPTDNHYLQEMMNMRSVMDSLANLRVISPPSVEKLEKMSLKVRKVKD
AIDAKVILIDVSPLFNTEIDNIHLEIMNLEKKLTSVPTDDINDRQKARVSSEPVVELLDE
IQTLYKVFMLEHERVRNVSKAVEDSMDTRQEVKYKLSMCNTGDLALLKKKVTELSVVQLN
QKVCGDPGLEDCSGCTGALCGRDLGNRKCGGPNCKGAVPVSEDASETAEKLKDQLVNLPS
RLQDTRNKINNANQTTQDAKNRARDLQDQISNNTNSCEREKSKPRELIQQVKDYLMDDMV
PPEDTEKMAQAVLRIQLPQSPANIQSIISNVGNLLKNATRLLEDLNNLDKKVKAARDLQQ
EARDLKEQMENTDVRKIIQDIYEADKAQDKANNLLERVSRNKDETKDRIRDAEVTLDNIE
ARLMIQTEDLWKEIEAMKDKTEENREAAREAREAAESAFNMTADAEMELNDVMKQFEVLK
QKQQNQEVEGQAAGRLKNIMMEAEDMKRQVEDKLQQIRDMEQKIQQLLHRRNQKAAEVSD
LLEAAESIRQEISTRAQVYTECTG
NT seq
6375 nt
NT seq
+upstream
nt +downstream
nt
atgatctttcactttttcatcgctttccttccagcagttcgccttcaggactacaaggac
ttccaggacccatgccccatcagctcctgtaacccccaagtgggtgacctgttggtgggt
cgtgctgctcagctctcagcttcatccacttgtggtctggatggaccacagaattactgc
atcatcggatatctggaggaggggcagaaatgtttcatatgtgactctcagctaccgtat
catcgctacaacagcccaaacagccaccgtattgagaatgtcatcacaaactttgacctc
gagagaaagctgaagtggtggcagtcggagaatggagttcatcatgtcagcatccagtta
aatctggaaactatgttccagttcagtcacctggtcctcaccttcaagagttttcggcca
gcagccatgttggtggagcgctcaaaggattttggacgaagttggaaagttgtccgttac
tttgcagaagactgttctcttcatttcccttcagtgtcaactgcgccagccaggagcatc
gatgatgttgtctgtgatagcagatactctggatcagaaccatcctcagatggagaggtg
gtgctgaaagctcttgatcctgtctttaaaacagaaaaccctcacgcaccaaacatccaa
gatctgaccaccgtgacaaacattcgggtgaacttcactcgtcttttcacacttggtgac
acactgctgagtcgaagacgcaggaaccctcaagacaaatattactattctgtttacaac
atggtggttcaaggaagctgtttctgtaatggacatgccagccagtgtgtgcccatggct
ggagttcgctgggacattttcacccagcctggcatggttcacggacaatgtgtttgtcag
cacaatacagctggagaaaactgtgagagatgtcaggactttcaccacgactccccctgg
aggcccggaggagagggtgcagcagacatctgccgagcatgtaaatgccacggtcactcg
gactcgtgtcactttgatgcagctcgttacaaagcgactggaggtgtgagcggcggtgtg
tgtgatgactgtggcaacaacaggatggggcctcagtgtgaacagtgtcgaccttttttg
tatcaggatctgcagagagcgaaggacgacccacacgcctgcataccatgtaactgcgat
ccagttggttcacgcgacggcggtcagtgtgactctctgagtggtcagtgtgtatgcaaa
gaaaacgtggagggtcaacgctgtgatcgctgcaaacatggcttcttcagcctgaggcag
gatgaccccgcgggttgtcaggcatgcaggtgtcatcctcttgggagtgtcgggtcatgt
gatcagctaacaggaacttgtgaatgtgaccaaatggcgagtggaccgctgtgtgatcag
tgtctgccaggtttctggggtttgggaaactctgtgttcagatgctcaccttgtaactgt
gatattggcggcgctcaaggacacacgtgttctccagaggatggacagtgtcgctgttta
cccaacatgattggtcggcgatgctctgaccctgcacccgggtacttcttgcctccactg
aattatttcctctatgaggctgaactcactttcccactgctaggaggaaactcttctaca
acttctcctcctccatcgccttcttcttctgctgctccatcatcttcttctctggtgtgt
aacagaactattcaacctctccctgtcatatggcactgcccctcattgcctgaaatcagc
aacaatagttccgagtccaccaccatcagtggcctcaatgattacagactcattgcactg
acttcagtggttgcaaagttctttaagaagctggtcttaaagcacataaaggactgcatc
acacctagctttgacccccaccagtttgcctataaggcaaacacgtcaaccgaggatgca
atttccactgccctccactctgctctgcatcacctggagaatcctgggactttcgtaagg
atgctcatcagtgatttcagctcggcctttaataccatcatctcagacattcttatagcc
aagctgagatcatccacccagcactggctcaccacagggatgtgtgccactctgatgggg
ctcatcaccgatgatgatgacactgcctacagagatgagatccaacgtgactacgtggag
agggtgtcctcctttaagttcctcagtacccacatttccgaggacctatactggacaact
aacacatcagccctggtgaagaaagcccagcagcacctccatttcttgagggttctgaga
tggaacaggctgcagtctgacctactattctccttctatcgtaccacaattgacagtgtg
ctggtgcacgccatccccgtgtggtacgccggttgcacaacagccaataagaagagactc
cagagggtcatcagaactgcagagaagatgatcggctgtccactctccaccctggactcc
attgccagctctagatgtctctccagagccggggcaatcataaaagaccgcctccatcct
aaccaccatctattcaacatcctgccctctggaaaaaggttcagatccattaggtacaaa
accaacagactaaagagcagcttcttcccgtggctgaacccaggagtgttacctcagtgt
gagcagtacttcaaagagcaaggttttgacactaagttccaaaatggacgagtcatttta
gttcggcaggctcaacaacttgcccagcgacagaaaaggagaaagagattgcagcaaacc
agcatccctctggtccccggttacaccctgcaaatcattccctgtcagagggcatatcac
cagccagtaacctggactggcctgggattggttagagtgtttgagggggtggggcttaga
tttactgtggacaacctcccatcttcgactgattaccagctggtgatttcctatgaacta
gagtctgcatctgactggatggctttagtcagtatcatcaaagtgtcacaaggcgatggc
ggctgcagcagcagtccaacaggaagtaaaactctgattctacctggaaactctagacga
ggtattctggactctctgctctgtctgaatgctggaggtcactattttgtggatatcacc
ttttacaaacagcccagatctgatggttcacacatcctaattgactcgattagtcttttt
aatagaattgggtcagtccaaaatttctgctctcagagcgacctcgacacttttcaccag
tttcactgtactggattgactgtcaagcttggccctcaggagtcgctacctgaagtctgc
gagggactcatcatgagcctttcagcacaaatccacaatggagctgtcctttgcaggtgt
aatgttatcggctctattggaccatcctgcagtaaactgggtgggttttgtcaatgtaag
gccaatgtgattggtcgttgctgcgatgcctgtgccccagtgacgtttggctttggacct
gaaggctgcaaacgatgtgattgtgacccccatggctctgtgtcagagctgtgcgatcag
gtcagtggtcagtgtgcatgtcgttcagagacggcgggtcagcgctgcgatcgctgtcag
atgggattctggggattcccttcctgtcgatcgtgtgaatgtaatgggctgtcagagatg
tgtgatggacttaccggagactgtctgagctgcagggagcacactactggacccagttgt
gaaaggtgtgttgagggttactatggtgacccaatctccagacaggcctgtcagctgtgt
ttgtgtccagatgttttgagcagtggacgattcttcgccacttcctgtcagcatgaccca
cagtccctaaggctcatctgtaattgccaggaggggcacacaggtgtaagctgtgatagg
tgcagccctggtttctatggtgatctgacattgccaggtgcagtctgtaaagagtgtccc
tgcaacaacaacatcaaccctgatgatcccaactcatgtaacagcagaacaggagagtgt
ctacactgccttcacaacacaatcggcctacactgccaaaactgcaaacctggctactat
ggcaatgccctaacccaggactgcaaagaatgctcctgtgatcgacgggggactcaggtg
actcggtgtcctctggggagaccctgtttctgtgatctgaggacaggacagtgtccctgc
aggacaggtgtgataggtaaactctgtgatgaatgtgaggacagatactggaacctgaac
atagcctcgggatgtcagccctgcagctgtgaccccgtcaactctatctccaacatctgt
gacaaggtaactggacgttgtccatgccatcctgagtttggaggaaggcactgtgatgaa
tgcagagaaaatcattttaggaatccagacctgcagtgtatcccatgtgactgcaacccg
gagggaaccaaacgaccatcatgtgaccctgagactagcgagtgcatctgtcgggcgggt
gtaaccggtatattctgtgatgagtgcgcccccggcttcaatacattattcccagcctgt
gaacagtgccatccctgcaatgcactctggactcaaattgtcactgatgtccagcaagct
gcccagaaaataacaacccttatccctcataacaacatgcagcccacagataaccactac
ctacaggagatgatgaacatgcgctctgtgatggacagcctggccaacctgagagtaatc
tccccaccaagtgtggagaagctggagaaaatgtctttgaaggtcaggaaggtgaaagat
gccatcgacgcaaaagtgatcctgattgacgtgtctcccctcttcaacactgaaattgac
aacattcatctagaaatcatgaaccttgagaagaaactcactagtgtcccaactgatgac
ataaatgaccgacaaaaagcgcgtgtctcatctgaacctgttgtagagctgttggatgag
atccagacgctttacaaagtcttcatgttggagcatgagagagtgagaaatgtcagcaaa
gctgtagaggactccatggacaccagacaggaagtcaaatacaaactgagcatgtgcaac
acaggagacctggcactgctgaagaagaaggtcacagagctgagtgtggttcagctcaac
cagaaggtctgtggagatccaggtttggaggactgttcagggtgtactggagctctttgt
gggcgtgatctggggaacaggaagtgcggaggtccaaattgtaaaggagctgttcctgtc
agtgaggatgcttcagagactgcagagaagctgaaagaccagctcgtgaatttgccttcc
agactgcaggacaccaggaacaagatcaataatgccaatcagacgactcaggatgccaaa
aaccgggccagagatctgcaggaccagatcagcaacaacacaaactcgtgtgagagagag
aaaagcaaacccagagagcttattcagcaagtcaaagactacctgatggatgacatggtt
cctccagaggacactgagaaaatggcacaagctgttttgagaatccagctcccacagtca
cctgctaacatccagtccataatcagtaacgtcggtaatttgttgaaaaatgccaccaga
ctcctggaggacttaaacaacctggacaagaaagtcaaggcagccagagacctgcagcag
gaagctcgggacctcaaggagcagatggagaacactgatgtgaggaagatcattcaggat
atttatgaagcagacaaagctcaggacaaagctaacaacctcttggagagagtgagcaga
aacaaagatgaaaccaaagacaggatccgagatgccgaagtcacactggacaacattgag
gcgaggctcatgattcagaccgaagatctgtggaaagagatcgaagctatgaaggataaa
actgaggagaacagagaggcagcgagagaagccagagaggcggcagagagtgctttcaac
atgaccgccgatgcagagatggagctcaatgatgtcatgaagcagtttgaggttttaaag
caaaaacaacagaatcaggaggtcgagggtcaagctgctggtcgactgaagaacatcatg
atggaagctgaggacatgaagagacaagtggaggacaaactccagcagatacgagacatg
gagcagaagatccagcagctgcttcacagaagaaaccagaaagctgctgaagtgtccgac
ctgctggaggcggctgagtcgattcgacaggaaatctcaactcgagcacaagtatacacc
gagtgtactggatag
DBGET
integrated database retrieval system
