Oreochromis niloticus (Nile tilapia): 100708097
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Entry
100708097 CDS
T06104
Symbol
pdzrn4
Name
(RefSeq) PDZ domain-containing RING finger protein 4 isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
onl04121
]
100708097 (pdzrn4)
Enzymes [BR:
onl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100708097 (pdzrn4)
Ubiquitin system [BR:
onl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
100708097 (pdzrn4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
GRASP55_65
Motif
Other DBs
NCBI-GeneID:
100708097
NCBI-ProteinID:
XP_005455671
Ensembl:
ENSONIG00000016839
UniProt:
I3KJC4
LinkDB
All DBs
Position
LG17:8185332..8230385
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AA seq
815 aa
AA seq
DB search
MGCNLCTLQKREEHYKLLYEIAQVNGLAKVEHDEAVVEAIRRDPIVVQVLRRTPTRAAAA
VVHNSTSSPQDVCVVDVCTQTDITFEHIMALAKLRPATPPVPDICPFLLSDSCHSIHTME
HEFYECPEYLSNTTADVERIVEYEYEEVELCRQNSQEKLGLTLCYRTDEEEDTGIYVSQV
EPNSIAAKDGRIKEGDRILQINGCEVQDREKAVALLSSEEARSITLLVTRPEIQLDEEAG
WLDDEQQELMEEILEERRKQKEHGFDKGDEHQAEEGMTTDTATCSSNNQDSGFGRSTDSP
EHQPLLAKLQRRSPAHCLRERWRAEHPHTRRGAVVPRENQSTRTLSTGQGHEGVGSVRNS
GGGILGLENRFQQLLELKCQIRNGGECGVYSIRHSIECSLTEQGGEDGDCVDDIGGGGGV
EQELRMLNEELRSIELECQSIMQAHQLRQSHQQEHSQPSPCSPGRSTKDGHKRHGRLADI
HEHPERLEADKMREKDSSSAYNTAESARSTPLGMERSPDHSLQRHISITNQKNLRLASST
PSSPIPIPKPQGTSSRSRQADPGPVISSSPDQSNPSRSESDPALPADDERCEKKGRTRDS
RRRLPYASSYHTTPYHGQGGSKQLQSYMQLLQQHSSVEYSQSQLSLLSVCRDPVHRNGRP
GEPRLEWKVKVRADGTRYVARRPARDRILRERALRIREERSGGMTTDDDAMSEMKMGRYW
SKEERKQHLARAREQRKRREFMQKSRLECLKEGPVSGAEGRKEINILELSHKKMMKKRNK
KILDNWMTIQELMSHGARVPEGSKVHNAFLSVTTV
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgggctgcaatttgtgcaccttgcagaaacgggaggaacactacaaactgctctacgag
atcgcacaggtgaatggtttggccaaggttgaacatgatgaggcagtggtggaggccatc
aggcgagaccctatcgttgtccaggttctccgacgtacgcccaccagagccgcagcggct
gtcgtacataacagcaccagctcgccgcaggatgtgtgtgtggtcgatgtgtgcacgcaa
acagacatcacctttgaacatattatggcactggccaagcttcggcctgctaccccacca
gttcctgacatttgtcccttcctgctgtctgacagctgtcactcaatccacaccatggaa
catgagttttatgaatgtccagagtacctgtctaacaccacagcagatgtggagaggatc
gtagagtatgagtatgaggaagtggagctatgcaggcagaacagccaagaaaagctgggc
ctgacactgtgctacaggactgatgaggaggaggacactgggatctatgtgagccaggtt
gagccgaacagcatagcagcgaaagatgggcgcataaaggaaggagatcgtattctgcag
ataaatggctgtgaagtacaagacagagagaaggctgttgccctgttgtcaagtgaagaa
gcaaggagcatcacactactggtgacaaggccagaaatccagttggatgaggaggctgga
tggctggatgatgagcaacaggagctcatggaggagatcctcgaggagaggaggaagcag
aaggaacatggctttgacaagggagatgagcatcaagctgaagaaggcatgacaacagat
acagctacatgttcttccaacaatcaagacagtgggtttggacgcagtacggacagtccg
gagcaccaaccactgctggctaaactccaaagaaggagcccagctcattgcctaagggag
cggtggcgggcagagcatccccacaccaggcgaggagctgttgtcccacgggaaaaccag
agcacgagaacactgtccacaggccaaggccacgaaggggtagggagtgttcgcaatagt
ggaggtgggatcttgggtttggagaatcgtttccagcaactcttggagctcaagtgtcag
atccgaaacgggggtgagtgtggggtgtactcaattcgacacagtatagagtgtagcctt
accgaacaagggggggaggatggcgattgtgtagatgacatagggggcgggggaggggtg
gagcaggagttgaggatgctaaacgaggaactgcgcagcattgagctcgaatgccagagc
attatgcaggcccatcagctccgccagtcccatcagcaggagcactcacagccgtcgccc
tgttccccaggaaggagcaccaaagatggacacaagcggcacggcaggctggctgacatt
cacgaacacccagagaggttggaagccgataagatgcgcgagaaagatagctccagtgcc
tacaacacagcagaaagtgcacgctcaacaccactgggtatggagagatctcctgaccac
tctctgcagagacacatcagcattaccaaccagaaaaacctcagactggcttcttccaca
ccctcaagccctattcctatccccaagccccagggcacatctagtcgtagcagacaagca
gatccaggtcctgtaatctcaagcagccctgatcagagcaacccttccaggtctgagtcg
gaccctgctctgcctgcagatgatgagaggtgtgagaagaaagggaggaccagagactca
aggagaaggcttccttacgcttcttcatatcacacgaccccttatcatggccagggagga
tctaagcaactccagagctacatgcagctgctacagcagcattcatccgtggagtattct
cagagccagctgagtcttctcagtgtctgccgagatcccgtgcaccgtaacggacgccct
ggggaaccacgactagagtggaaggtcaaagttcgagctgacgggacgcgatacgttgcc
cggaggcctgctcgtgatcgcatactgagggagagggcgctaaggatcagagaggagagg
agcggaggcatgaccacagatgatgacgccatgagtgagatgaagatgggccgctactgg
agcaaagaggagaggaagcagcacctggcacgagccagggagcaaagaaagaggagggag
tttatgcaaaagagccgcctggagtgtttaaaggagggaccagtgagtggagctgaaggc
aggaaggagatcaatatcttggagctcagtcacaaaaagatgatgaagaaacgaaataaa
aagatcctggataactggatgactatccaggagctgatgagccatggggccagagtccca
gagggctccaaagtccataatgcctttctttctgtcacaactgtttaa
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integrated database retrieval system
