Oreochromis niloticus (Nile tilapia): 100708152 Help Entry 100708152         CDS       T06104                                  Name (RefSeq) collagen alpha-1(XVIII) chain   KO K06823   collagen type XVIII alpha Organism onl  Oreochromis niloticus (Nile tilapia) Brite KEGG Orthology (KO) [BR:onl00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:onl04147]     100708152    00535 Proteoglycans [BR:onl00535]     100708152    00536 Glycosaminoglycan binding proteins [BR:onl00536]     100708152 Exosome [BR:onl04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    100708152 Proteoglycans [BR:onl00535]  Extracellular matrix (ECM) proteoglycans   Basement membrane proteoglycans    100708152 Glycosaminoglycan binding proteins [BR:onl00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    100708152 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Endostatin Collagen Collagen_trimer DUF1554 Motif Other DBs NCBI-GeneID:  100708152 NCBI-ProteinID:  XP_013125686 LinkDB All DBs Position LG16:5339433..5383489 Genome browser AA seq 1501 aa AA seqDB search MVMMRIQFGLVVLLAQWVVCSDAWLWSWTDTTTSAPAVDPEGSGSPAGSGEPLSETIAKI GEEIIDEGHQMEKAVQTLDKTPEALKLNTVVSTTEPENEHESENFATGMSSHTSKPGNGT SSPISSEGSDNSTFTGNVTRLRSDFGSESASNNGSATGTETIWRSRFGTHKAQKEDSGVS LLQLIGDPPPSEITQIYGPDNTPSFVFGPDANTGQLARAHLPNPFYRDFSLIFNLKPTTN QGGVIFSITDARQSIMHVGVKLSAVQNNNQNVILYYTKPKSARSFEAARFLVTSMTDTWT RFSLAVMDNKVLFYFNCDTDPQVVHIERSTEDMELESGAGVFVGQAGGADPDKFLGVIGE LRVVGDPFAANRHCEEDEDDSDMASGEGSGYVETRPPRPGTEKHTWTTARPTLRPIPHPP MTRNDETARDSQYVSLSVESSPALRGPQVEAKGQKGDKGDRGEKGERGPAGPKGEAGSGS SSRSGSRGEKGESGTKGEKGSAGFGNKGVKGEPGPPGPPGPPGPPGPAPEHTVGSDGSVS RVPGPRGPPGAPGPQGPPGADGEPGDPGEDGKTGAQGPPGFPGTPGDSGAKGEKGDRGEG HPGPRGPPGPPGPPGPGFRSTFEDMEASGFPDLESIRGLPGLPGPPGPPGPPGLPGPSTA ETASSSAAFGPPGKDGAPGKPGLPGIPGTDGKPGAPGPNGEKGDAGELGLPGAIGEKGAQ GERGLPGTQGEPGLAGLPGPRGPVGPPGPPGPPGPSYRVGFDDMEGSAGGFNGRPGIGGP DGIQGPPGLPGLPGNPGLPGRPGEKGDEGPAGRDGQPGLDGFPGPPGSKGDRGDNGERGE PGRDGTGLPGPPGPPGPPGQIVYQTSGNFDEVVGRAGPQGGPGLPGRAGFPGPMGPKGDR GDPGPPGYGEKGEKGEPGLVIGPDGNFLNLAQPKGDRGLPGPVGPPGPYGPPGLKGEIGM PGRPGRPGINGYKGEKGEPGVGSGLGYPGVPGPPGPPGPPGPPGPASPLDRFNRYDERNY PAIKGEKGERGEPGLPGIPGASPNVDIYTFRNELKGERGEPGVKGEKGEPGGGYYDPRFG GVQGPPGPPGLPGPKGDSIIGPPGPSGPTGPPGIGYDGRPGPPGPPGPPGPPGSLSGSYR PNYPVSIPGPAGPPGPPGAPGLSSGVTVLRSYDTMIATARRQEEGSLIYIIDRADLYLRV RDGVRQVMLGEYNPFFRELENEVAEVQPPPVILYPESQDQSQNNGAGHYSEGFTLIKPIE PPAPTPADPRYFPKYEPRFPDQTHTGHTDGRFATQQTESRFPVTPQRQPVPPVLEPAGRF DVHGSGLHLIALNSPHTGNMRGIRGADFLCFQQARAVGLKGTFRAFLSSKLQDLYTIVRR SDRDSIPIVNLKNQVLFSSWDSLFGDNVSTMRENVPIYSFDGRDILRDSAWPEKMVWHGS SKKGHRQTDQYCETWRIGDHAVTGLASSLHSGHLLQQTPSSCSSSYIVLCIENAFTSPSK K NT seq 4506 nt NT seq  +upstreamnt  +downstreamnt atggttatgatgaggatccagtttggacttgtggttttgttggctcagtgggtggtctgc tctgatgcctggctgtggtcctggactgatacgacaacctcagccccagcggtagacccc gagggatctggcagtccagcaggtagtggagaaccgctgtcagagactattgcaaaaatt ggagaagagatcattgatgaaggacatcagatggaaaaagctgtgcagactttggataag actcctgaggctcttaaactgaacactgtagtgtcaacaacagaaccagagaatgaacat gagtcagaaaactttgctacagggatgtcatcacacacaagtaaacctggtaatggcaca tcttcaccaataagttctgaaggatctgataactcaacctttacaggaaatgtaacaaga ctcagatctgactttggatctgaatctgcatcaaacaatgggtctgcaacaggaactgaa actatctggcgatcaagatttggaacccacaaggctcaaaaagaagacagcggagtctcc ctgctacaactgattggagatcctcctccgagtgagatcacccaaatctatggaccagac aacacccccagttttgtctttggaccggatgccaacacgggccagctggcacgggcccac ctcccgaacccattttaccgagacttttccctcattttcaacctgaaacccaccactaac cagggcggggtcatcttctccatcacggatgctcggcagagtatcatgcatgtgggagtt aagctgtcagccgtgcagaacaacaaccaaaatgtcatcctgtactacaccaagcccaag tcagcgcggtcctttgaggcagccaggttcctcgtgacctccatgacggacacctggacc cgtttttctcttgcagtgatggacaacaaggtgctattctacttcaactgtgacacagac cctcaggtggtgcacatcgagaggtcaacggaggacatggagctggagagtggcgctggg gtctttgttgggcaggctggaggagcggatcctgataagttcctgggtgtgatcggtgag ctgagggtggtgggggatccctttgctgccaacaggcactgtgaggaggatgaagatgac tcagacatggcttcaggggaaggaagcggttatgtggaaaccagacccccaagaccaggc acggaaaaacacacatggacgacggctcgtccaactttgaggcccattccgcacccaccg atgaccaggaatgatgagactgcaagggactcccagtacgtttcactttctgtggagtcc agccccgcccttcgtgggccacaagtcgaggctaaaggacagaagggcgacaaaggggac agaggggagaagggagagaggggtccagctgggccgaagggagaagcaggctctggctcc agctcaaggagtggatcccgtggagaaaagggagaatctgggacaaagggagaaaagggc agcgcaggctttggcaataaaggtgtaaagggtgagccaggcccacctggacccccgggg ccccctggtcctccaggacctgcacccgagcatacagttggcagtgacggctcagtttcg agagttcccggacccagaggaccacctggagcaccaggcccccagggccctccaggagct gatggagagccaggcgatcctggtgaggatggaaaaactggtgctcaaggacctccaggc ttccctggaaccccaggagactctggagccaaaggagagaagggagaccgtggagaaggc catccaggcccgagggggcctccgggtcctccaggacccccaggaccaggattcagatct acctttgaggatatggaggcctcaggattccctgatctggaatctattcggggtctacct gggctaccaggtcccccaggcccccccggacctcctggtcttccaggcccctctacagct gaaacagcatcgagttctgcagcattcggaccaccaggaaaagatggggcacctggtaaa cctggcttgcctggcataccgggtactgatggcaaaccaggagctcctggtcccaacggg gagaagggtgatgctggcgagctgggtcttccaggagcaattggagaaaagggtgctcaa ggcgaacgtggtttaccaggaactcaaggagagccaggattagctggtctgcctggaccc aggggaccagttgggcctcctggacctcccgggcctcctggaccaagttatcgagttgga tttgatgacatggagggctctgctggtggtttcaatggacgtcctggcatcggaggacca gatggaatacagggtcctcctggattacctggacttccaggtaaccccggcttgcccggc agaccaggtgagaagggtgatgaaggtcctgctggaagagatgggcaaccaggcctggat ggcttccctggacctccggggtcaaagggtgacagaggagacaacggagagaggggtgaa ccaggtcgagatggaactggactacccggtccaccaggtccacctggaccaccaggacaa atcgtctaccagacatcaggcaattttgatgaagtcgttggcagagctggccctcagggt gggcctggtttacctggtcgagctggatttcctggtcccatggggccaaaaggtgaccga ggagatcctggtcctccaggctatggtgagaagggtgaaaaaggtgagccaggcttggtt attggccctgatggaaattttctgaatttggcacagccaaagggagacagaggacttcca ggacctgttgggccccctggaccatatgggcctcctggactgaaaggtgaaattggaatg cctggaagacctggtcgtcctgggataaatggatataagggtgagaaaggagagccaggg gttggatctggccttggctaccctggagtgcctggccctccaggaccacctgggccacca ggaccccctggcccagccagtcctttagaccgtttcaatcggtatgatgaaaggaattat ccagcaattaaaggagaaaaaggagagcgtggtgagcctggacttccagggatcccagga gcatcccctaatgttgatatctacacattcaggaatgaactgaagggagagcgtggagaa ccaggtgtcaagggagaaaaaggagagcccggtggtggatattatgacccacgatttgga ggagtacaaggacctccaggaccacctggcctcccaggtccaaagggagattctataatt gggccacctggaccatctggaccaacagggccaccaggaattggttatgatggtcgtcca ggtcctccaggaccacctggacctcctggacccccggggtccctttcaggatcatatcgt cccaattatcctgtcagtatccctggtcctgctggtcctcctggcccacctggagctcct ggactatcctctggagtgactgttttgagatcatatgacacaatgattgctacggccaga cgtcaggaagagggcagcctcatctacatcatagacagagcagatctttatttgagagta cgcgatggagtgcggcaagtcatgcttggagagtacaatcctttcttcagagagctggag aatgaggtggcagaagtccaacctccacctgtgattctatacccagagtcccaggaccag tcccaaaacaatggagcaggccattactctgagggtttcaccttgataaaacccattgaa cctccagcacccacacccgcagaccctcgatactttccaaagtatgagcccagattccca gaccagacacacacgggtcataccgatggaagatttgccacccagcagacagaaagcaga ttccctgtcactcctcaacgacaacccgtcccccctgtgctggagcctgctggccgtttc gacgtacatggatcaggactgcacctcatcgccttgaacagccctcacaccggtaacatg cgagggattcgtggggcagacttcctgtgcttccagcaggctcgcgctgtcggcctgaag ggaacatttagagccttcctgtcctctaagcttcaagacctctacaccatcgtccgcagg tcggacagggacagcatccccatagtaaacctcaagaaccaagtgttgtttagcagttgg gactctctctttggtgacaatgtcagcacaatgagggaaaacgtaccgatctactccttt gatggtagagacatcctcagggatagcgcttggcctgaaaaaatggtctggcacggatca agcaagaaaggccaccggcaaacagaccagtactgcgaaacgtggcggattggcgaccac gctgtgactggtctggcatcatcactacatagcggccacctcttgcagcaaacccctagc agctgctccagctcctacatcgtcctttgcattgagaacgccttcacatcaccctccaaa aaataa

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