Oreochromis niloticus (Nile tilapia): 100708182
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Entry
100708182 CDS
T06104
Symbol
prpf3
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp3 isoform X2
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100708182 (prpf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
onl03041
]
100708182 (prpf3)
Spliceosome [BR:
onl03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
100708182 (prpf3)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
PWI
TPX2
Motif
Other DBs
NCBI-GeneID:
100708182
NCBI-ProteinID:
XP_003450949
Ensembl:
ENSONIG00000006394
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All DBs
Position
LG11:21503267..21511871
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AA seq
703 aa
AA seq
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MSLPKREVEELRPWVERTVKKVLGFSEPTVVTAALHCVGKGLDKRKTIDQLRPFLDDSAG
GFVERLFEALEESRSTRGNKGSGEKNRKRELKDVFGEEADTGAVRETPEPTDGTTAKRKR
VPRFEEVEQPEVIPGPPSESPGMLTKMQIKQMMEAATKQIEERKKQLSFTAPAPATTSQL
DAPPLSRLLGTAGAAAAGGGSSIAPYQAASFMNDAIEKARKAAELQARIQSQLAMKPGIL
GALGNTGPQNFVALANLHAMGIAPPKVEPKEVNKPTPLILDEKGRTVDASGKEVELTHRM
PTLKANIRAVKREQFRQQLKEKPGDDLESTSYFDQRVPVPPAQRARRTFKFHDQGRFEKI
AQRIRTKAQLERLQNEIAQAAKKTGIQASTKLALIAPKKEIGEGQVPNIEWWDSFILPSN
IDINPDTKFEELELFGVTSLVEHPAQMSPPVDTDKPVTLGVYLTKKEQKKLRRQTRREGQ
KELQEKVRLGLMPPPEPKVRISNLMRVLGTEAVQDPTKVEAHVRAQMAKRQKAHEEANAA
RKLTAEQRKEKKVKKLKEDLTNGVHIAVYRIRNLQNPSKKFKVEANANQLYLTGTVVLHK
DVNIVVVEGGPKSQKKFKRLMMHRIKWEEHNSKRDDPDGDDDTKRNNKCWLIWEGTAKER
SYGEIKFKQCPTESMAREHFKKHGTEHYWDLALSQSVLETTDD
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttccaaagcgggaggtggaggagttgaggccatgggtggaacgcactgtgaag
aaggtgctgggtttctcggagcccactgtggtgactgcagcattgcactgtgtgggaaag
ggactagacaaaaggaagaccatagaccaactgcgtccttttctcgatgactctgctgga
ggctttgtagagcggctttttgaagccctcgaggagagccgcagcacacgtgggaacaaa
ggatctggagaaaaaaaccggaagagagaacttaaggatgtgtttggtgaagaggctgac
acaggcgcagtgcgagaaactcccgagccaacagatggcacaacggcaaagaggaaacga
gtcccccgttttgaggaggtggagcaacctgaggtgataccaggacctccatcagagagc
cccggcatgctcaccaaaatgcagatcaaacagatgatggaagcagccacaaaacagatc
gaagaaaggaagaaacaactaagctttactgctccagctcctgctacaacatcgcagctg
gatgcccctccactctctcgacttcttggcactgctggtgctgcagcagctggtggtggg
tcatccatcgctccctaccaggctgccagcttcatgaatgatgcaattgagaaggcccgt
aaagccgctgagctacaggctcgcattcagtcccagttagctatgaaacctggcatcctc
ggagctttggggaacactgggccacaaaactttgtggcactagctaatctacatgccatg
gggattgctccacccaaagtagaacccaaggaggtgaacaaaccgacacctcttatcctg
gatgagaagggaagaactgtagatgccagtggcaaagaggttgaactcacacaccgcatg
cctacgctcaaagctaacattcgagcagtaaagagagagcagttccgccagcagctgaag
gagaagcctggagatgacttggagtccacatcctacttcgaccagcgtgtgcctgttcct
ccagctcagcgcgcacgcaggactttcaaattccatgaccagggacgctttgaaaagatt
gctcagagaattagaactaaggcccagttggaaaggttgcagaatgagattgcccaggca
gcaaagaagacaggaatccaggcttcaaccaagctagcactgatcgctcctaaaaaggag
attggagagggacaggttcccaatattgagtggtgggactctttcatcctgccttccaac
atagacataaatccagacacaaaatttgaagagttagagctgtttggtgtgaccagcctg
gtggaacatcctgcccaaatgagcccaccagttgacacagataagccagtaactctaggt
gtatacttgacgaagaaagaacaaaagaaacttagacggcagacacggagggaaggacag
aaagaattgcaagagaaggttcgtctaggactgatgcctccaccagagcccaaagtgcgg
atctccaacctgatgagagtcttggggacggaggcggttcaggaccccacaaaagtagaa
gcacatgttagagcgcagatggccaagaggcaaaaggcccacgaggaggccaatgcagct
cgcaagctcacagcagagcaaagaaaagagaagaaggtcaagaagttaaaagaagacctc
actaatggtgttcacattgcagtgtacaggattcgaaacctgcaaaatccttctaagaag
tttaaggtggaagccaatgccaaccagctatacctgacaggcacagttgttctgcacaaa
gatgtcaacattgttgtggtggaaggagggcccaaatcgcagaaaaagttcaagaggctg
atgatgcacagaatcaaatgggaggaacataacagcaagagagatgatccagatggtgat
gatgatacgaagaggaacaacaagtgttggttgatttgggagggaacagctaaagagcgt
agctatggagagattaagttcaagcagtgccccacagagagcatggccagagaacacttc
aagaagcacgggactgaacactactgggacctagcgctgagccagagtgtgttggagacc
acagacgactga
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