Oreochromis niloticus (Nile tilapia): 100708208
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Entry
100708208 CDS
T06104
Symbol
gdf5
Name
(RefSeq) growth/differentiation factor 5
KO
K04664
growth differentiation factor 5
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04060
Cytokine-cytokine receptor interaction
onl04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
100708208 (gdf5)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
100708208 (gdf5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
onl04052
]
100708208 (gdf5)
Cytokines and neuropeptides [BR:
onl04052
]
Cytokines
Transforming growth factors (RSTK binding)
100708208 (gdf5)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TGF_beta
Motif
Other DBs
NCBI-GeneID:
100708208
NCBI-ProteinID:
XP_003456284
Ensembl:
ENSONIG00000038003
UniProt:
A0A669EY86
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Position
LG5:3006855..3016621
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AA seq
479 aa
AA seq
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MKAVTRLSLLLSCWTLVHLHPGPTARVRAGPPVIRGEASRTISSGRTEPVRSRLPGGDAY
DKAHAPAAINAHARAGGGGGGSSGRSLGKVAAAAVRTSSPQRARSAPAPAAQRGAASHKQ
PLVTPHDYMLALYWSLSSGDVNGSTLHEAGLANTITSFVDKGQDERGPQLRRQRYHFNIS
SLERDGLLGAELHILRKRLPDPRRVLIGYRGGEGGGVPSPLLRLYTCASGKQKAVLVQMK
TVEDLFSSTWEVFDVWKVFRGIKTQKGQHSQELCFELEALEHGGGRPMDLRALGFARHGR
TNKEKAFFLAFGKSKKRDLFYKEIKARSGHDNKTVYEYLFTQRRMRRAPAARGAKKPAQQ
SLPQPISQHQTVKARLRCHRRRLHVNFKEMGWDDWIIAPLEYDAYHCDGACDFPIRSHLE
PTNHAIIQTLINSMDPESTPPTCCVPTRLSPISILYIDSANNVVYKQYEDMVVESCGCR
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgaaagccgtgacgcgtctgtctctgctgctcagctgctggactctggttcacctgcat
cccggccccacggcgcgtgtccgcgcaggtcctccggtaatcagaggagaggcgtccagg
acgatcagctcagggcgcacggagcccgtgcgctcccgactgcccggcggggatgcgtac
gataaggcgcacgctcccgctgccattaacgcacacgcacgagcgggtggaggaggtgga
ggttcatcggggagaagtttgggaaaagttgcggccgcggcggtgcgcacctcgtccccg
cagagagcccgcagcgcgccggctccggcggcgcagcggggggccgcgagccacaaacag
ccgctcgtgacgccgcacgactacatgctcgcgctgtactggtctctctccagcggtgac
gtcaacggcagcacgttgcacgaggccggcctggccaacaccatcacgagcttcgtggat
aaagggcaagatgaacgtgggccccagctgcgacggcagaggtatcatttcaacatcagc
tccctggaacgggacgggctcctgggggccgagctacacatcctgaggaagcgcctgcct
gaccctcgcagagtcttgataggctacagaggaggagaaggaggaggagtcccgtcaccg
ctcctaaggctgtacacctgtgcttcaggcaaacaaaaggccgttcttgtccagatgaag
accgtagaggatctgttcagcagcacatgggaagtgtttgacgtatggaaggtcttcagg
ggcatcaaaacccagaaaggccagcattcccaggagctgtgctttgaactggaagcgctg
gagcacggaggcggtcgccccatggaccttcgcgctctgggattcgctcgacacggcagg
accaacaaggaaaaagccttctttttggcttttgggaaaagcaagaagcgtgaccttttt
tacaaagagatcaaagcgcggtcaggccacgacaacaaaacagtctacgagtacctgttc
acccagcgacggatgagacgggcacctgctgcgaggggagccaaaaaacccgcgcagcag
tccctgccacagcccatatcccagcaccagacggtgaaggccaggctgcgctgccaccgg
agacggctccacgtcaacttcaaggagatgggctgggacgactggatcatcgcgccacta
gagtacgacgcctatcactgcgatggcgcctgcgatttccccatccgctcacacctggag
ccgaccaaccacgctatcatacagaccctgattaactccatggacccggagtcaacgcca
cccacttgctgcgtcccgacacggctcagcccaatcagcatcctctacatcgactcggcc
aataacgtcgtctacaagcaatacgaggacatggtggtggagtcgtgcgggtgcaggtag
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