Oreochromis niloticus (Nile tilapia): 100708270
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Entry
100708270 CDS
T06104
Symbol
smc1a
Name
(RefSeq) structural maintenance of chromosomes protein 1A
KO
K06636
structural maintenance of chromosome 1
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04110
Cell cycle
onl04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
100708270 (smc1a)
04114 Oocyte meiosis
100708270 (smc1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
onl03036
]
100708270 (smc1a)
Chromosome and associated proteins [BR:
onl03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
100708270 (smc1a)
Meiosis-specific proteins
Cohesin complex and associated proteins
100708270 (smc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
AAA_29
AAA_23
ABC_tran
Motif
Other DBs
NCBI-GeneID:
100708270
NCBI-ProteinID:
XP_003448214
Ensembl:
ENSONIG00000012052
UniProt:
A0A669DX71
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All DBs
Position
LG20:complement(20051292..20064133)
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AA seq
1231 aa
AA seq
DB search
MGYLKLIEIENFKSYKGRQIIGPFHKFTAIIGPNGSGKSNLMDAISFVLAEKTSNLRVKT
LKDLIHGAPVGKPAANRAFVSMVYQEDNGEERAFTRVIIGSSSEYRINSKVVGLPEYSEE
LEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGELAQEYDRRKKEMVKAEE
DTQFNYHRKKNIAAERKEAKQEKEEAERYQRLKDEVARASVQLQLFKLYHNETEIERLNK
ELGQRNKEIDKDRKKMDHVEEELKDKKKELGRLMREQQTIEKEIKEKDSELNQKRPQYIK
AKENTSHKIKKLEAARKSLQNAQKMYKKRKADMDELDKEMRAVELAKQEFEERMEEEAQS
QGQDLTLEENQVKQYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAK
IKQKIREIEENQKRIEKLEDYIATSRQSLDEQKRMEEELTEEVEMAKRRIDEINMELNQV
MEQLGDARIDRQENSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGK
NMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELRGAKLVIDVIRY
EPPHIKKALQYACGNALVCENVEDARRIAFGGPYRHKTVALDGTLFQKSGVISGGASDLK
AKARRWDEKAVDKLKEKKEKLTEELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLE
QTKTRHLSLNMQEKSKLESELANFGPRINDIKRIIQSREREITDLRDRMNLVEDEVFVEF
CKEIGVRNIREFEEEKVKRQNEIAKKRLEFETQKTRLGIQVDYEKNQLKEDQEKVMMWEQ
TVKKDEAEIERLKKEEHRHMKIIDETMAQLQDLKNQHLTKKSEVNDKNHEMEEIRKKLGG
ANKELTQLQKEVTAIETKLEQKRSDRHNLLQACKMQDIRLPLRSGTMDDISQGEGSSQTD
ESSSQRTSSSVLAKEALIEIDYSILSEDLKDALSEEEIKAETNTLQQRLNEQQSILQRIS
APNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERFDRFNNCFESVSTNI
DEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALALL
FAIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKDQSMENFQAIVISLKEEFYTKADSLI
GVYPEQGDCVISKVLTFDLSQYPDANPNPNE
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atgggttatttaaaactgatagagatcgaaaatttcaagtcgtataaaggaaggcagatt
atcggaccttttcacaagtttactgcaatcatcggacccaatggatctggaaagtccaac
cttatggatgccatcagcttcgtgttggcagagaagacaagtaacctgcgtgtgaagact
ctgaaggatctaatccatggagcgcctgtagggaagccagctgccaacagagcctttgtc
agtatggtgtaccaggaagataatggagaagaacgtgccttcacaagagtcattattggt
tcttcctctgagtatcgcatcaacagtaaagtagtgggcctgcctgaatacagcgaagaa
ctggaaaaacttggaattctgataaaggctaggaacttcttggtctttcagggagctgtt
gagtctattgccatgaagaaccccaaagagcgtacagcgctgtttgaagagatctcccgt
tcaggagagctggcccaggagtatgaccggaggaagaaggagatggtgaaagcagaggag
gacacgcagttcaactatcatcgcaagaaaaacatcgctgcagagcgcaaagaggctaag
caagagaaagaagaggctgagcgttaccagcgtcttaaggatgaagtagccagagctagt
gtacagttgcagctcttcaaactttaccacaatgagactgagatcgagaggctgaacaaa
gagcttgggcagcggaacaaagagatcgataaggaccgtaaaaagatggaccatgtggag
gaggagctgaaggacaagaagaaggagctgggcaggctgatgagggagcaacagaccatt
gagaaagaaattaaggagaaggactctgagttgaaccaaaagaggcctcagtacatcaaa
gccaaagagaacacctcacacaaaatcaagaagcttgaggcagcaagaaaatcactgcaa
aatgcccagaagatgtacaagaagcggaaggcagacatggatgagctggacaaagagatg
agggcagtggagctggctaagcaagagtttgaggaaagaatggaggaggaggcgcagagc
caaggccaggatctcaccttggaggaaaatcaggtgaagcagtatcatcgtctgaaggag
gaggccagcaaacgtgctgccacgctggcacaggagctggagaagttcaaccgcgaccag
aaggctgaccaggaccgcctggacttagaggagagaaagaaagtggagacagaggccaaa
attaaacagaagatccgtgaaattgaggaaaaccagaaacgtattgaaaaactggaggat
tatattgccaccagcaggcaatcactagatgagcagaagcgtatggaggaagagctgact
gaggaagtggagatggccaaaaggaggattgatgagatcaatatggagcttaatcaggtg
atggagcagcttggagacgccagaatcgacaggcaggagaacagtcgccagcaacgtaag
gccgagatcatggagagtataaaaagactctatcctggctctgtgtatggtcgtctgatc
gacctgtgtcagcccactcagaagaaatatcaaatcgctgtgactaaagtgttgggtaag
aacatggacgccatcattgttgactcagagaagactggcagagactgtattcagtacata
aaggagcagagaggagagccggagaccttccttcctcttgattaccttgaagtgaaacca
accgatgagaaactccgagaactgcgaggagccaagctggtgattgatgtgattcgctat
gagcctccccacatcaaaaaagctctgcagtacgcttgtggcaatgctctggtctgcgag
aatgttgaggatgcacgaagaattgcgtttggagggccatacaggcacaagacggtagcc
ctggacggtactctgttccaaaaatctggagtcatctctggaggtgccagcgacttgaaa
gctaaggccagacgatgggatgagaaggcagtggacaagctcaaagagaagaaggagaaa
ctcactgaagagctcaaggagcaaatgaaggccaagaggaaggaggcagagctgcgtcag
gtgcagtctcaggcccacggtctgcagatgagactcaagtactctcagagtgatctggag
cagacaaaaacccgtcacctctccctcaatatgcaggagaagtctaagctagagagtgaa
ttggcaaactttggccctcgcatcaatgacatcaagaggatcatccagtcccgtgagcgg
gaaatcaccgacttgcgagaccgcatgaacctggtggaggatgaagtgtttgtggaattc
tgtaaggagattggagtgaggaatatcagagagtttgaggaggaaaaagtgaagaggcag
aatgagattgcaaagaagcgtcttgagtttgagactcaaaagacccgcctgggtatccag
gtggactatgagaagaatcagctgaaggaagaccaggagaaggtcatgatgtgggagcag
actgtgaagaaggacgaggctgaaatcgagagacttaaaaaggaggagcacagacacatg
aaaatcattgatgagacaatggcccagctgcaggacctgaagaaccagcatctcaccaag
aaatctgaagtcaatgataaaaatcacgagatggaggagatccgcaaaaaactgggtggt
gcaaacaaggagttgactcagctccagaaggaggtcactgccattgagaccaaactggag
cagaagcgcagtgaccgtcacaacctgctgcaagcctgcaaaatgcaggatatcaggttg
cctcttcgttctggaacaatggatgatatcagccagggagaggggagttcccagaccgat
gagtccagcagccaaaggacatccagcagtgttttggccaaagaggctcttatagaaatt
gactacagcatcctgtccgaagacctcaaggatgcactgtcagaggaagagatcaaggct
gagacgaacacactgcagcagcgtctgaatgagcagcagagcatcctgcagagaatcagt
gcacccaacatgaaggctatggagaagcttgagagtgtcagggacaaattccaagagacc
agtgatgagtttgaggctgctcggaaaagagccaagaaggccaagcaagcctttgagcag
atcaagaaggaaagatttgatcgctttaataactgttttgagtctgtctccaccaatatc
gatgagatctacaaggctctgtcacgcaacagtagtgctcaggcatttttaggtccagaa
aacccagaggaaccatatttggatggtatcaattataactgtgtggccccaggcaagagg
ttcagaccaatggacaacttgtcaggaggagagaaaactgttgccgccctggctctgctc
ttcgctattcacagctacaaacccgcccccttctttgtgctggatgagatcgacgcagct
ctggacaacactaatattggcaaggtggccaactacatcaaagaccagtcaatggagaac
ttccaggccattgtcatttctctgaaggaggaattctacaccaaggcagactctctcata
ggtgtttatccagagcaaggagactgcgtcataagcaaagtgctaacctttgacctctcg
caatatcctgatgccaacccaaatccaaatgagtaa
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integrated database retrieval system
