Oreochromis niloticus (Nile tilapia): 100708312
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Entry
100708312 CDS
T06104
Name
(RefSeq) integrin alpha-M isoform X2
KO
K06461
integrin alpha M
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04145
Phagosome
onl04514
Cell adhesion molecules
onl04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
100708312
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
100708312
09142 Cell motility
04810 Regulation of actin cytoskeleton
100708312
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
onl04131
]
100708312
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
onl04147
]
100708312
04515 Cell adhesion molecules [BR:
onl04515
]
100708312
04090 CD molecules [BR:
onl04090
]
100708312
00536 Glycosaminoglycan binding proteins [BR:
onl00536
]
100708312
Membrane trafficking [BR:
onl04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
100708312
Exosome [BR:
onl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100708312
Cell adhesion molecules [BR:
onl04515
]
Integrins
Integrin alpha subunits
100708312
CD molecules [BR:
onl04090
]
Proteins
100708312
Glycosaminoglycan binding proteins [BR:
onl00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
100708312
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
FG-GAP
ITGAX-like_Ig_3
Integrin_A_Ig_2
VWA_2
Integrin_A_Ig_1
FG-GAP_3
DUF11
Spy1
Motif
Other DBs
NCBI-GeneID:
100708312
NCBI-ProteinID:
XP_019218190
LinkDB
All DBs
Position
LG8:17416253..17442054
Genome browser
AA seq
1182 aa
AA seq
DB search
MRTPERAARDRATPLTLSAEASSHSSVFFLGIKTMDWIIIATLFLSVLNAALCFNIDPVA
WKTLSNSAAGFGYQVVQRQSDLLISAPLEQYSQNGRGEIFRCSTSAQNCQNIQLQAPGFA
VNMSLGLTMKSDPTAQNTVVCGPTIPKDCKSITMYNGVCFQIDPSNTFGPPVPSSLEVCP
AQVDIAFLLDGSGSVSQGDFRRMKMFVKDLIQSFLSIDAQFSVSQFSLLPQVHFYFKKFS
SSGSIETDIDGISQQRGAAYTAKAIRHLVENVFTSHGRSRPNVKKVLIVITDGESQDRTD
LGGAAQLAESKNIVRFAIGVGNAFTQHAAKRELDTIASSPSDKHVFQVKNFNAIEIIRLN
LQEKIFSVEGSQTSGESLKMEMSQEGFSAVYVPEGIQMSIVGANQWKGGYVQYTTGGQKL
KTYEDMSLEPDSYLGYSMATAKTQTGSLTIVGAPRYKHRGVVVAINRQSFENQKIEPLSS
QYQTGEYFGAEVCTVDINNDDITDLIFISAPMYMEPDREGRVYVCRLTDLFVECNFDDPL
VLRGHAAVKGRFGSSLAVLPDLNSDGFRDLAVGAPLENNGEGSIYIFHSEGGGRISPTYS
QRITGSEVQSGLKFFGLSISQSSFDQSGDKLPDLAVGSKGTVVLLRSRPIVMVKAEVSFS
PVQIPTQNVDCSKPLENTANICFTMSSISTVNTEFDAQASIHYTLTLDATRKPPNNRAYV
SGKQREESGSVTVESTGKLCSTVTFFIEACPEDALNALSNELKFTFDGLPSTTQLRPSLA
PQAQTTTIYPLEFEINCGSDNKCVDHLKVDFNFTRSSEVKVGIDELLNVTVTVENRGENS
YNSHVILTYPAGLSYRKFTSWQGRIECNSLDSEDGLSRGRTDCTIDKPIFKSKTKAFFTV
SYGIDTNSQLEREIFVTANATSGNQEHATTSELYKKKSIDVKYSIFMTFESSHSYNDFTF
GINDLQTPVQQSVKVINDIRALNFTVVIRVPVRLGEKEIWLNLSSLQISGCQRGDDEEPG
VRNFVESIQKNKTVDCSVAMCRVFKCSTFMGRLQSRTYEISANLTSGWIEQIGLQSAKFL
LISTATLETDKNQYIYFPAGSDNNSSVRKIIAEVEVYPQPDFTKAIIGGCLGGCLGGLAF
LALLTTGLYKGGFFKSKYKQMMSENPQYGPVPQMDAGAPPTE
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atgcgcactccggagcgtgcggcccgagacagagctactcctctcacactatcagcagaa
gcaagttcacactcatctgtctttttccttgggattaaaacaatggactggataatcatt
gctaccttattcttgtcagtgttaaatgctgcactttgtttcaatattgatcctgtggct
tggaagaccctgagtaactctgctgctggttttggctaccaggtggtgcaaagacaatca
gatttgctcatcagtgctccactggaacagtattcacaaaatggaaggggagaaatattt
aggtgcagcacctctgcccaaaactgccaaaatatacaattgcaagcaccaggttttgca
gtcaacatgtctcttggtttgacaatgaaaagtgatcctacagcacaaaacactgtggtg
tgtggtccaaccattccaaaggactgcaaaagtatcaccatgtacaatggtgtgtgcttt
cagatagacccttctaatacatttggaccacctgtaccttcttcccttgaagtgtgcccg
gcgcaagtagacattgcctttctgttggatggttcaggaagtgtatctcaaggagacttt
cggagaatgaagatgtttgtgaaagatctaatccagtcatttctctcaattgatgcacag
ttttctgtttcccagttctcacttttaccgcaggttcatttttattttaagaaattttcc
tcatctggatcaattgagactgacattgatggaatatctcagcagaggggagccgcttac
acagctaaggccatcagacatcttgtggaaaatgttttcacatcacacggaaggtccaga
ccgaatgtgaagaaggtcttgatagtaattactgatggagaatctcaggatcggactgat
ctgggaggtgcagcacagctagcagagagtaaaaacattgttcgatttgctattggtgtg
ggaaacgcatttactcagcacgcagcaaaacgagaactggacaccattgcatcgtctccc
tcagacaaacatgtgtttcaagtgaagaatttcaatgcaattgaaataataagactgaat
ctgcaggaaaaaattttttcagttgaaggatctcaaaccagtggagagtcactgaaaatg
gaaatgtctcaagagggattcagtgcagtttatgtgcctgagggaattcagatgtctatt
gttggtgcaaaccagtggaagggaggctacgtgcaatacacaacaggaggccagaagctg
aaaacatatgaggacatgtctttggagcctgacagttatcttggttactccatggcaact
gctaaaacccaaactggttcactgacaattgttggtgctccaagatataaacacagagga
gttgtggtcgctattaacagacaaagctttgaaaaccaaaagattgagcccctttcatca
cagtatcagactggtgaatatttcggggcagaggtgtgtaccgtggacataaataatgat
gacatcactgatctaatcttcatatcagccccaatgtacatggagcctgatagagaggga
agagtttatgtttgcagattaactgatttgtttgtggagtgtaattttgatgatccatta
gtactaagaggacatgcagctgtcaaaggaaggttcggctcttctcttgctgtactgcct
gatctaaactcagatggattcagggatttggcagttggagcacctttggagaataatggt
gaaggcagcatctacatattccacagtgaaggaggaggaaggatcagtcctacttactca
cagagaattactggctctgaggtccagtcaggactgaagttcttcggtctatcgatcagt
cagtcgtcttttgaccagagtggtgataaacttcctgacttagcggtgggttcaaagggc
acagttgttttactgagatcaagacccatagtaatggtgaaagctgaggtgtcattcagc
ccagtccaaatccctacacagaatgtagactgctcaaaaccattggagaacacagctaac
atctgctttactatgagttcaatatctacagtcaacacagagtttgatgctcaagcaagc
attcattatactttaacactggatgccactcgcaaacctccaaacaaccgagcttatgtc
agtgggaaacaacgagaggagtccggctcagttacagttgaatcaactggcaaactgtgc
tcaaccgtcacattcttcattgaggcctgtccagaggatgcactcaatgcactttccaat
gagctgaaatttacatttgatggtttaccctcaaccacacaactcagaccaagtctcgcc
ccacaggctcaaacaacaaccatttatcctttagagtttgagatcaactgtggctctgac
aacaaatgtgttgaccacctgaaagtggatttcaactttaccagatcctcagaggttaaa
gtgggcattgatgagcttttgaatgtcacagtcacagtggagaacagaggagaaaactcc
tacaacagtcatgttattctcacgtacccagctggactctcctacagaaagttcacgagt
tggcagggaagaattgaatgcaactctttggacagtgaagatggtttatcacgaggaagg
acggattgcactattgacaagccaattttcaagagcaaaactaaggctttcttcactgtc
tcctatgggattgacacaaacagtcaacttgagagggagatctttgttactgcaaatgcc
accagtggaaatcaggagcatgccactacaagtgaactctacaaaaagaaatcgattgat
gtgaaatacagcatttttatgacatttgaaagctcccacagctacaacgatttcacattt
gggataaatgacttgcaaacaccagtccaacaatcagttaaggttataaatgatatcaga
gcacttaatttcactgtggtgatcagggttcctgtgaggcttggtgaaaaagagatttgg
ttgaatttgagcagcctacagatttcaggctgtcagagaggagatgatgaagaaccaggt
gtcaggaattttgttgaaagcatacaaaaaaataaaactgtggactgctctgtagccatg
tgcagggtgttcaagtgcagcacatttatgggaagactgcagagtaggacatatgaaatt
tctgccaacctcacttcaggatggatagagcagattggacttcagtctgccaaattcctt
ttgatcagcacagccactctggaaactgacaaaaaccagtacatctactttccagcaggg
tctgacaacaattcttctgttcgcaagattatagccgaggtagaagtgtatcctcagcca
gatttcaccaaagcgatcattggaggatgcctgggaggatgcctgggagggctggctttt
ctggctttactcactactggcctgtataagggtggatttttcaagagtaaatacaaacag
atgatgagtgaaaatccacaatatggaccagttccacagatggatgcaggagcaccccca
acagaataa
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integrated database retrieval system