Oreochromis niloticus (Nile tilapia): 100708374
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Entry
100708374 CDS
T06104
Symbol
nup98
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear pore complex protein Nup98-Nup96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100708374 (nup98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
onl03019
]
100708374 (nup98)
03036 Chromosome and associated proteins [BR:
onl03036
]
100708374 (nup98)
Messenger RNA biogenesis [BR:
onl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100708374 (nup98)
Chromosome and associated proteins [BR:
onl03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
100708374 (nup98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
100708374
NCBI-ProteinID:
XP_013131401
Ensembl:
ENSONIG00000007458
LinkDB
All DBs
Position
LG10:complement(32138445..32161234)
Genome browser
AA seq
1866 aa
AA seq
DB search
MFNKSFGTPFGGGTGGFGTSSTFGQQNTGFGTTGGFGTSAFGATTNTGGLFGSTQNKPGG
LFGSSTFSQPATSSTSTGFGFGAASGTSTSLFGNTGTGTTGGLFSQQNNAFGAKQATSFG
SFGTSTSSGGLFGSTNTTSNPFGGATSLFGGSGFSATQQPGTTVKFNPPTGSDTMVKAGV
TTSINTKHQCITAMKEYENKSLEELRLEDYQAGRKGPTNPMAPGTGSLFGQATATSSAAT
GLFGSSAPNTSFSFSQNKSTFGGPTTGGFGATTGGLFSQQNQQQAGSLFKPFGQTTTTQS
TGFSFGNTNTIGQANTSSMGLFGNTAASQSGGLFGSAQTSAATGFGTATGLFGQTNTGFG
NVGTQSLFGNKTAGFGTTTTSAPSFGPTTSLFGNKPTLTLGPGTNTSSFGFNANPAGGGL
FGNKSTTGALGTGLGTSFGTAVGPGQTLFGNTQNKLGTALGTMGTFGTTGFNSGTSTLGF
GATQPVALTDPNAAAAQQAMLQQQLSVLAYSPYGDSPLFRNPLSDPKKKEERLKPTNPTA
QKALTTPTHYKLTPRPATRVRPKALTSSGGSKSQLFDGLDDDEPSLTNGAFVPRKSIKKL
VLKNLNNSQYSSPLNKESDDLASPSEYPQNGHSHVEEEEEQLRRVAGPGRRADDDPEVTQ
FYVNPIAKPIPQGRAHASLQDTIGDLNMHKGSRNGLEVRTRTHVAASPSVSSLPENNRHD
DIVRISDDDPAVELSNDDVSASFGEESLQEEREEEQQLSQQSPHPAGIVLNRVGYYTIPS
MDELADMVDENGECIVENFTIGRKGYGSIFFPGEVNVSGLNLDEIVHFRRKEVIVYPDDK
SKPPEGEGLNRRAEVTLDGVWPNDKTTCTQIRSPERLSDMNYEGRLEKASRKQGARFLEY
RPETGSWVFEVAHFSKYGLQDSDEDEDVPAKADTKKLKTLTTLPPSRLQQQQLPPSQQQV
APQAQSTAVMELQGGAIELDSDMADITQSFPTESMLGGEEDSDLLAGETDTTISKLGGLA
SSELDGVSASGHIASTLGINPHTLQIMKASLFAEDDDDTDMFHDHAAMKVSTDVSSPRLV
LPATQGRPSVGGLLQARFTSGLSQLSDSPRPLLPPSRPSPASVEAPRSLQWAGPGPSPFM
LPSRTPEPSIRTVGVRRLGGPVPLKESITHGKGGLLMDTGLFAVRSFRVGWGPGWTLAHC
GSRLSSPTSKQVEHQELAAKTDFSFLPKPARSKPLTESPYKVVVEQVVGLEPLRGKTFEE
EEDEESQAVLQRPLEICLKHSIVEVSDGSACPAVRPQPGVAALHEYAEWIAELNDRRGDT
ESLLGYWAEVWTLCEALWGRLGPSDQEPKAPGEYEQQLERRRSFSAWLSRGASRRVEEEV
ALAGKDRHVNAVFSYLTGNRISEACRLAQKEGDHRLSLLLSQAVGSQYCRDLLALQLADW
HCMQTDCYLPEERLRIFALLAGKPVWQSTDSAVNVCAELDWKRCVAVHLWFMLPPTASVA
DALARYEAAFQGSCEAGKYACAPLPPYLEAEQPDLEEEESKRPLYDLCFHLLKLYSDRHY
GLQQLLEPLAVTWERLDYRLSWHLWGVLQALHYTHLSAPRQGLLHASYAAQLESAGLWHM
AIFILLHIPEHTQRERAVREMLVLHCPLQETEESVRRERFLTEQLLIPEQWIHEAKATRA
HRDGDRHQQALHLYXARYWNQCHRLLIQHLASDCIINDNHDYLLEFLEGLALPEHCATIQ
DWDTAGRVYLDYIRVIKTLQDIQQMENAGYELERLYTDVTSLCSRIELLPCHTAKDRLAQ
SEMAKRVANILRAVLSLQQGDTADSLSIPLAQLAPHISRLPMPEDYTLEELRGLTQSYLR
QLIVSQ
NT seq
5601 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaaatcatttgggactcccttcggtggtgggacgggaggatttggcacctcg
tccacgttcggtcagcaaaacacgggcttcgggacgacgggaggcttcggcacgtctgcg
tttggggcgacgacaaacaccgggggactatttggatccacgcagaataaaccgggtggg
ctctttgggtccagcacattcagccagccagcgacttcctccaccagcaccggcttcggt
ttcggcgcagcgagcggcacctccaccagcctgtttggcaacactggcacgggcaccacc
ggcggactcttctcccagcagaacaatgcttttggcgccaagcaagccacctcgtttgga
agcttcgggacgagcaccagcagcggcggcctcttcggctccaccaacaccacctccaac
ccgttcggcggggctacgtccctgtttggaggttcggggttctccgccactcagcagccg
ggaacgactgtgaagttcaaccctccgacaggaagtgacacaatggtgaaggcgggcgtg
acgacgagcatcaatacgaagcaccagtgcatcacggccatgaaggagtacgagaacaag
tctctggaggagttgaggctggaggactaccaggcgggcaggaaaggcccgaccaacccg
atggcgccgggaaccggcagtcttttcggccaggccacggccacgtccagtgccgccacc
ggcctcttcggatcctctgctcccaacaccagcttctcctttagccagaacaagagcacc
ttcggagggccaactaccggcggtttcggtgcgaccacaggcggcctgttcagtcagcag
aaccagcagcaggccggcagcctcttcaagccctttggtcagaccaccaccacccagagc
accggcttctccttcggcaacaccaacacgataggacaggccaacaccagcagcatgggt
ttgtttgggaacacggcggcgtctcagtcgggcggcttgttcggctctgctcagaccagc
gccgccactggtttcgggacagccacgggcctgttcggccaaaccaacactggatttggg
aacgtcggcactcagagtttattcggtaacaagacagccgggttcggcaccaccaccacc
agcgccccgtcctttggccccaccaccagcctttttgggaacaagcccaccctcacgctg
ggacccggaaccaacacttccagcttcggttttaatgccaaccctgctggaggaggactg
tttgggaacaagtccaccaccggagcgctggggactggactgggaaccagcttcggtaca
gcagtcggccccgggcagaccctgtttggcaacacccagaacaaactgggcaccgcgctg
ggaacgatggggacgttcggaacaaccggattcaacagtggaacgagcaccctgggattc
ggagcgacgcagcccgtcgccctcacagatcccaacgcagcggctgcccagcaggccatg
ctccagcagcagctcagtgtgctggcgtactcgccgtacggagactcaccgctcttcaga
aacccactctcagaccccaagaagaaggaggagcgcctgaaaccaaccaatccgacagcc
caaaaggctctgaccacgcccactcattacaagctgaccccgcgtcctgcgaccagggtg
cgacccaaagctctgacgtcttccggaggctccaagtcgcagctcttcgacggtctggat
gacgacgagccgtcgctcaccaacggagccttcgtgccgaggaagagcatcaagaagctc
gtcctgaagaacctgaacaacagtcagtacagcagtcctctgaacaaggagagcgacgac
ctcgcctcgccgtcagagtacccacagaacggacacagccacgtggaggaggaagaggag
cagctaaggagggtggcgggccctggcaggcgggccgacgacgacccggaggtcacccag
ttctacgtcaaccccatcgcaaagccgatcccgcagggccgcgcccatgccagcctgcag
gacaccatcggcgacctgaacatgcacaaaggctcgaggaacggcctcgaggtcagaacc
agaacacatgtcgccgcttccccaagcgtgtcatcgctaccagagaacaaccgccacgat
gacatagttaggatatcagacgatgatccagctgttgagctgagcaacgacgacgtgtct
gcgtccttcggcgaggagtctctgcaggaggagcgagaggaggagcagcagctgtcccag
cagtctcctcaccctgcaggcatcgttctgaaccgcgtgggttattacaccatcccctcc
atggacgagctcgccgacatggtggacgaaaacggggagtgcatcgtggagaacttcacc
atcggcaggaaaggttacggctccatcttcttccccggcgaggtgaacgtgtcgggactg
aacctcgacgaaatcgtccacttcagacgcaaagaggtcatcgtgtacccagacgacaag
agcaaaccgccggagggggaggggcttaacaggcgggcggaggtgactctggatggcgtt
tggccgaacgacaagacgacctgcacccagatcaggagccccgagcgtctgagcgacatg
aactacgagggccggctggagaaggcgtcgcgcaagcagggagctcgcttcctggagtac
cgacctgagaccgggtcctgggtgttcgaggtggctcacttctccaagtacggcctgcag
gactcggacgaagacgaggacgtcccggcgaaagccgacaccaagaagctgaagacgctg
acgactctccctccctcccggctgcagcagcaacagcttcccccctctcagcagcaggtg
gcgccacaggctcagtccaccgccgtcatggagctccagggtggcgccatcgagctggac
agtgacatggccgacatcacccagagcttcccgacagagagcatgctgggaggagaggaa
gacagcgacctgctggcgggggagacggacacgacgatctccaagcttgggggtctggcc
tcctcagagctcgacggcgtttctgcgtccggccacatagcgtctacgctggggatcaac
ccacacacgctccagatcatgaaggcgtctctgtttgctgaggacgacgatgacaccgac
atgttccacgatcacgcggcgatgaaggtttccacggatgtctcgtctcctcgcctcgtc
ctgccggccactcagggccgaccctctgtcggcggtctccttcaggctcgattcacctcg
ggcctctctcagctgtcagactctccccgtcctctccttcctccatcacggccgtctccg
gccagcgttgaagccccccgctctctgcagtgggcggggcctggcccgtcccccttcatg
ctgccctcccggactccggagccttcgattaggacggttggcgttcggcggctcggcggc
cccgtccccctcaaagagtcgatcactcacgggaagggaggtttgctcatggacaccggg
ctgtttgccgtgcgctccttccgggtcgggtggggtcctggctggacgctcgctcactgc
ggcagccggctgagctcgccgacgtccaaacaggtcgagcaccaagaactggcggcaaag
acagacttcagcttcctgccgaaacctgccaggagcaaaccactcacagaaagcccctac
aaggtggtggtggagcaggtggtgggtttggaacctctcagagggaaaacctttgaagaa
gaggaagatgaagagagccaggcggtgctacagcgccccctggagatctgcctgaagcac
agcatcgtggaggtctcagacggctccgcctgccctgcggtgcgaccgcagcccggcgtg
gcggcgctgcacgagtatgccgagtggatcgcggagctgaacgacagacggggcgacact
gagtcgctgctgggctactgggccgaggtctggactctgtgtgaggcgctgtggggccgg
ctgggcccctcggatcaggagcccaaggcgcccggcgagtatgagcagcagctggaaagg
aggcggagcttctcggcctggctgtcccgcggtgcctcccgcagggtggaggaggaggtg
gctttggccgggaaagatcgccacgtcaacgcggtcttcagttacctgacgggaaaccgc
atcagcgaggcgtgccgactcgcccagaaggaaggagaccaccgtctgtccctgctgctg
tctcaggccgtgggctctcagtactgcagggaccttctcgcccttcagctcgccgattgg
cactgcatgcagaccgactgctacctgcccgaggagcgactccgcatcttcgctctgctc
gccgggaaaccggtgtggcagtccaccgactctgcggtgaacgtgtgcgccgagctggac
tggaagcgctgcgtggccgtccacctctggttcatgctgccaccgactgcctctgtggcc
gacgccctcgccagatacgaagccgcctttcagggctcgtgtgaggccgggaagtacgcc
tgtgcccccctgcctccatacctggaggcggagcagccagatctggaggaggaggagtcc
aaacggccgctgtacgacctctgcttccacctgctcaaactttacagcgacagacactat
gggctgcagcagctgctggagcctctcgccgtcacctgggagcgcttggattaccgcctg
agctggcacctgtggggcgtcctgcaggcgctgcactacacccacctgagcgccccacgg
cagggcctcctccacgccagctacgccgcgcagctggagagcgccggcctgtggcacatg
gccatcttcatcctgctgcacatccccgagcacactcagagggagcgagccgtgagggag
atgctggtgctgcactgccccctgcaggagacggaggagtcggtccgcagggagcgcttc
ctgaccgagcagctgcttatcccggagcagtggatccacgaggccaaggccacccgagcc
caccgcgacggcgacaggcaccagcaggccctgcacctgtacncggcccgatactggaac
cagtgccaccgcctgctgatccagcacctggcctcagactgcatcatcaacgataaccac
gactacctcctggagttcctggagggtctggcgctccccgagcactgcgccaccatccag
gactgggacacagcagggagggtttacctcgactacatcagagtcataaagactctgcag
gacatccagcagatggaaaacgccggctacgagctggagcgtctctacaccgacgtgacg
tctctctgcagcaggatcgagctcctgccctgccacaccgctaaagaccgcctcgcccaa
tcggaaatggcgaagcgcgtggcgaacatcctgcgtgcggtgctgagcctgcagcagggc
gatacggctgactccctcagcatcccgctcgcccagctggcgccgcacattagccgcctg
ccgatgcccgaggactacacgctggaggagctgcgaggcctcacgcagtcatacctgcga
cagctcatcgtcagccagtga
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