Oreochromis niloticus (Nile tilapia): 100708457
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Entry
100708457 CDS
T06104
Name
(RefSeq) transient receptor potential cation channel subfamily M member 3 isoform X8
KO
K04978
transient receptor potential cation channel subfamily M member 3
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
onl04040
]
100708457
Ion channels [BR:
onl04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
100708457
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSDAT_euk
TRPM_tetra
LSDAT_prok
Ion_trans
Motif
Other DBs
NCBI-GeneID:
100708457
NCBI-ProteinID:
XP_003452698
Ensembl:
ENSONIG00000011786
LinkDB
All DBs
Position
LG12:14069166..14184539
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AA seq
1732 aa
AA seq
DB search
MNQLDAPRPLNWTIRKLCHAAFLPSVRLLKAQKSWIERAFSKRECVHIIVSAKDPHRCCC
GRLIGQHVGLPPGISSSQNDKAERLAKNDSLSEKWSISKHTQLSPTDAFGTIEFQGGGHS
NKAMYVRVSYDTKPDLLLHLMTKEWQLELPKLLISVHGGLQNFELQPKLKQVFGKGLIKA
AMTTGAWIFTGGVNTGVIRHVGDALKDHASKSRGKICTIGIAPWGIVENQEDLVGKDVVR
PYQTMSNPMSKLTVLNSLHSHFILADNGTTGKYGAEVKLRRQLEKHISLQKINTRIGQGV
PVVALIVEGGPNVISIVLEYLRDTPPVPVVVCDGSGRASDILAFGHKYSEEGGIINESLR
DQLLVTIQKTFTYSRSQAQHLFIILMECMKKKELITVFRMGSEGHQDIDLAILTALLKGA
NASAPDQLSLALAWNRVDIARSQIFIYGQQWPVGSLEQAMLDALVLDRVDFVKLLIENGV
SMHRFLTLSRLEELYNTRHGPSNTLYHLVRDVKKGNLPPDYRISLIDIGLVIEYLMGGAY
RCNYTRKRFRTLYHNLFGPKRPKALKLLGMEDDMPIRRGRQKTTRKREEEVDIDLDDPEI
NHFPFPFHELMVWAVLMKRQKMALFFWQHGEEAMAKALVACKLCKAMAHEASENDMVDDI
SQELNHNSREFGQLAVELLDQSYKQDEQMAMKLLTYELKNWSNATCLQLAVAAKHRDFIA
HTCSQMLLTDMWMGRLRMRKNSGLKVILGLLLPPSILSLEFKNKDEMSYMPQDQEAYLQE
KEEEEPEKPVKEKEEEDMEFTAMLGKVTTETSRKKDVEEVQNRHRLIPMGRKIYEFYNAP
IVKFWFHTMAYVGYLMLFNYIVLVKMDLWPSPQEWIVIAYIFTNGIEKMREILMSEPGKL
LQKVKVWLQEYWNITDLMAILIFSVGMVLRLQEPPLMSYGRVIYCVNIIYWYIRLLDIFG
VNKYLGPYVMMIGKMMIDMMYFVIIMLVVLMSFGVARQAILNPNEDPSWMLARNIFFMPY
WMIYGEVFADQIDPPCGQNITTEDGVVVALPPCKTGAWIVPAIMACYLLVANILLVNLLI
AVFNNTFFEVKSISNQVWKFQRYQLIMTFHERPVLPPPLIIFSHITMVLKHLCCRWRKHD
DDERDYGLKLFITEDELKKVHDFEEQCIEEYFREKDDRFHSSNDERIRVTSERVENMAMR
LEEVNEREHFMKASLQTVDIRLAQMEELIGRIAVALERMTGVERGEVQKARSRTSSDCTD
SAYILRQAECPEAAYILRQSSFNSTEGNCYRLQEALEGTAEGSMSPPSPTSITTRTRSHS
FYVGAGRAAERGSRAERAESFFKDRSLSLHRANSSQSVSSAAGPKESKPLPLATLSVSQQ
HRPSSCIDIYVSTSEEVGPAEVFLDPLRMVPPLQRDSSLQSDIIETVLPGGREFSSAATS
GLGDRHSEGGAGSSGTAGAMFDDSAAADLSLCSAHLLPDSTLPPWDMEPSPPPSAGLLER
SKSSRYLSTAGTGFLDEPPLVKSHSLMFTPRSCYGGIGAGVQVKAAEYTSITDCIDTRCV
SSPYTPAERSQSPGGSTSFPFDKPSDVGSSHPEREAELSHTESDPEDPDDLVPPPDTPRL
GVLGGPSGAPLCSPFSKLERANSCSSDDSHPSLTLAPPHRKSLSVSERMERGPGLGADRG
PGPGGRGLAGTRNPFLRSKSGARPDTAKTDSLSMRKLAAPSAFRSFDRQNYT
NT seq
5199 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagctggatgcaccacggccactgaactggaccatcagaaaactgtgccatgca
gccttcctaccatctgtacgcctgctaaaggcacagaaatcgtggatagaaagagcattc
agcaagagagaatgtgttcatatcatagtgagcgccaaagacccccataggtgctgttgt
ggtcgtctaataggtcagcatgtgggcttgccaccgggcatctcatctagtcagaatgat
aaggcagagcgtttggccaagaatgacagcctgtcggagaagtggtcaatcagcaaacac
acacagctcagccccactgatgccttcggcaccattgagttccagggaggaggacactcc
aacaaagccatgtacgtacgagtatcttatgacaccaagcctgacctgctgctccacctg
atgaccaaggagtggcagctggaactgcccaagctgctcatctcagtccacgggggcctg
cagaactttgaattgcagcccaaactcaagcaggtctttggcaaagggctcatcaaggct
gccatgacaacaggggcctggatattcactggaggagtcaacacaggtgtgattcgccac
gtgggtgatgcactgaaagaccacgcctccaagtcaaggggaaagatatgcaccattggt
attgctccatggggcatcgtagaaaatcaagaggaccttgttggcaaagatgtggtgcgt
ccataccagaccatgtccaacccgatgagcaagttgacagttcttaacagtctccattcc
cacttcatcctggcggacaacggcaccacgggaaagtatggtgctgaggtcaaactgcga
cgccagctagagaaacatatctccctacagaagatcaacacacgtatcggtcagggtgtg
ccagtggtggcactgatcgtagaagggggccctaatgtgatctctatagtgctggagtac
ctcagggacactcctccagttcctgtggtggtgtgcgacggcagcggcagagcttctgac
atcttggccttcggacataaatactcagaggagggaggcataattaatgagtctctaaga
gaccagttgctggtgaccattcagaagactttcacctacagccgctcacaggctcaacat
ctgttcatcattctcatggagtgcatgaagaagaaggaactgataacagttttccggatg
ggatcggagggtcatcaagacattgaccttgccattctcacggcgttactcaaaggtgct
aatgcttcagccccagatcagctgagtttggctttggcgtggaacagagtggacatcgca
cggagtcagatcttcatctacggacagcagtggcctgttggttccctggagcaggcgatg
ctggatgccttagttctggacagagttgactttgtcaagctactgattgaaaatggagtc
agcatgcaccgtttcctcactctttccaggctggaggagctctataacacgcgccatgga
ccatcaaacacgctgtaccacctcgtcagagatgtcaaaaagggaaacctgcccccggac
taccggatcagcctcattgacattggactggtcattgaatacctcatgggcggggcttat
cggtgtaactacaccaggaagaggttccgaactctataccataacctcttcggacccaag
aggcccaaggctctgaaactgctggggatggaggatgacatgccaatccgaagaggtcgt
cagaagacgacacgtaaacgagaggaagaggtggacatcgatttggacgacccagaaatc
aaccacttccctttccccttccacgagctgatggtgtgggctgtgctcatgaaacgtcag
aagatggcgctgttcttttggcagcatggtgaagaggccatggccaaggccttggtggca
tgtaagctttgtaaggccatggcacacgaagcatctgagaacgacatggtggatgacatt
tcccaggaactaaaccacaactctcgagagtttggccagctggctgtggagctcctagac
cagtcctataaacaggatgagcagatggccatgaagctgctgacatacgagctgaagaac
tggagcaatgccacctgcctgcagctggctgtagcagccaaacatagagatttcatcgct
cacacctgcagtcagatgctgctgaccgacatgtggatggggcgcctgcgcatgcgcaag
aactcagggctgaaggtaatattagggctgctgctgccaccatcgatcctgagtctggaa
ttcaagaacaaggacgagatgtcctacatgccccaggatcaggaggcctatctacaggag
aaggaggaggaggagcctgaaaaaccagtgaaggagaaggaggaggaagacatggagttc
acagcaatgctgggcaaagtaaccacagagacatccagaaagaaggatgttgaggaggtt
cagaaccgccaccgccttatccccatgggacgcaagatatacgagttctacaatgcacca
attgtcaagttctggttccatacgatggcatatgtgggctacctgatgctgttcaactac
attgtcttggtcaagatggacctgtggccttctcctcaagagtggattgttatcgcttac
atcttcaccaatggcatagagaagatgagagagatcctgatgtctgagccgggaaagttg
ttacagaaggtgaaggtgtggcttcaggagtactggaacatcacagatctcatggccatc
ctcatattctccgtcggcatggtgctgcgtctccaggagccaccgctcatgagttatgga
cgggtgatttactgtgtcaacatcatctattggtacatccggctgctcgacatcttcgga
gtcaacaagtacctgggtccctatgtgatgatgatcggcaagatgatgattgacatgatg
tattttgtgatcatcatgttggtggtgctgatgagttttggggtggcacgtcaggccatt
ctcaaccctaatgaagacccatcctggatgctagccaggaacatcttcttcatgccttac
tggatgatctacggagaggtgtttgccgaccagattgaccccccctgtgggcagaacatc
actacagaggacggtgtggtggtggctctgcctccgtgcaagacgggtgcctggattgtc
ccagcgatcatggcctgctatctgctggtggccaacatactcctggttaacctgctcatt
gcagtgttcaataatacattcttcgaggtcaagtccatctccaaccaggtgtggaaattt
cagcgctaccagctcattatgaccttccatgaacgtccggtccttcctccacctctcatc
atattcagccacataactatggtcctcaagcacctgtgttgtcgatggcgcaagcatgac
gacgatgaaagggactatggactgaagcttttcatcacagaagacgaactgaagaaagtc
catgattttgaggagcagtgtatagaggagtacttcagggagaaagatgacagattccac
tcctccaatgatgagagaatcagagtcacttctgaaagggtggagaatatggcgatgcgt
ttagaggaagtcaatgagagggaacacttcatgaaggcatcactgcagactgttgatatt
cgtctggcccaaatggaagagctaattggacgaattgctgtagcactggagcgcatgact
ggtgtcgagcgcggggaggtccaaaaagcgcgttctcggacttcatctgactgcacagac
tctgcatacatactccgccaggctgagtgccctgaagcggcatacattctccgtcaaagc
agctttaacagcacagaggggaactgctaccgcctacaggaggctctagagggaacagct
gagggttccatgtctcctccttcgcccactagtataacaacacggaccagaagtcactca
ttttatgttggagctggtcgtgctgctgaacgtggaagtagagctgagcgagctgaaagc
ttcttcaaagaccgctcactcagtctccacagagccaacagctcacaatctgtgtcctca
gctgccggccccaaggagtctaagcccctcccactggcgacgttgtcggtctcccagcag
caccgtccgtcatcctgcattgatatctatgtctcaacgtctgaagaggtggggcctgcg
gaggtctttctagatcctctccgtatggtcccacctctccagagagactcctcgctgcag
tcagatataatagagacggtgctgcctggaggccgggagttcagcagcgctgccaccagc
ggtttgggcgacaggcactcagagggcggtgcaggcagcagtggaactgctggagctatg
tttgatgacagtgctgcagctgatttgtcattatgctcagcacatctcttaccagacagc
actttacctccttgggatatggaaccatccccacctccctcagcagggctgctcgaacgt
tctaagagcagccgctacctctctactgcaggcacaggattcctggatgagcctcctctg
gtcaagtcacacagcctcatgttcacaccaagaagctgttatggtgggattggggccgga
gtccaggtaaaggccgcggagtacaccagcatcactgactgcatcgatacacgctgcgtc
tcatctccatacacccccgcagaacgctcgcagtcacccggaggttccacttcattcccc
tttgataagccgtcggacgttggttcctctcacccagagagagaggcagagcttagtcac
acagagtctgatcctgaggaccctgatgacctggttccaccccctgatacccctcggcta
ggggtcctaggtgggcccagtggggcccctctctgctcccccttctccaagctggagcga
gcaaacagctgctcgtcagacgactcccatccttcgctcacgctggctcctccgcaccgg
aagagcctgtcggtgagtgagaggatggagagaggaccgggtctgggggcagacaggggg
cctgggcctgggggacggggtctggcaggaaccagaaaccccttcctcaggagcaagtct
ggagcaaggcctgacacagccaaaactgacagcctctcaatgaggaagctggcagctccg
tcggctttccgcagcttcgatagacaaaactacacgtga
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integrated database retrieval system
