Oreochromis niloticus (Nile tilapia): 100708475
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Entry
100708475 CDS
T06104
Name
(RefSeq) short transient receptor potential channel 2 isoform X1
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
onl04040
]
100708475
Ion channels [BR:
onl04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
100708475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
PKD_channel
Ank_2
Motif
Other DBs
NCBI-GeneID:
100708475
NCBI-ProteinID:
XP_003456857
Ensembl:
ENSONIG00000004269
LinkDB
All DBs
Position
LG10:11048099..11056756
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AA seq
1028 aa
AA seq
DB search
MENLTPEQWREIMSKKMRFSPELISAIQEGKTALLCGLLKTGDGITRQLDESEDRQWREA
LNLSIRLGNEDAMDALLQGVKFDFRQIHEALLVAVDTNQPIVVKRLLDRLDQEKGNKMDV
RSFSQAIFDRSVDNSQFAPGVTPLTLACQKDLYDIVTMLTQKGHVIPWPHKISCACLECS
NGRQYDLLKFSLSRINTYRGIASRAYLSITSDDAMLSAFSLSKELRKLSQKEPEFKPQYL
SLEQICQEFAVELLGMCRNQSEVSTILNSCGNETQDSLDEQAFEEGIPSLSRLRLAVNYN
QKQFVAHPICQQVLSSIWCGKLEGWRGSRTAWKLFVSVGIFLTMPLLCLVYWIAPKSKLG
KLVRIPVIKFLLHSASYLWFLITLLGESITMELYRDTFASRQQNLLHSSFHMVWVVGFFW
YECKEVWIEGLRSYFLDWWNCLDVMVLSMYLASFALRVLILLKGFFLCHDHDGTEECVYF
TQTSRDNWHQEDPQLIAEVLFAVTSMLSFTRLAYILPAHESLGTLQISIGKMIDDMMRFM
FILMIIGTAFLCGINNIYVPYVISPNLGRFNETFRFLFWTMFGVVNQDYVDMPEFVFAEF
VGRILYGIFTLVIVIVLLNMLIAMITNSFQKIEDDADVEWKFARSKLYLSYFREGLTMPV
PFNIIPSPKAIFYILRGIFRRICCCCCTCSSEQKYPPIASISNDKGSEDGQLSYRQQVIR
ALVQRYIESARREFEETKRKDIGNRMTELNKVVARMHNDLKVAQQYAMDDGQDTSDALTK
NGSSVLGKYIIGAKNNFRGFNTRQDDKYTALKVTVHSNEEKLDKEKFEAQMESDIQQNEV
DECRDEGQFPDSVVVKMEEGRAQAEQEEKKEIKSDEKEKAAKSEISVNKVKEEKKGGNGF
NTEETVSDEATNEEAETLSEGGMNKEGRVTDEHMTSAHAESIEVSETKQIISKFNHIELQ
EKKAAQPSWMKGRKPEHNVAEKSHNEKSNEKPEMKKMIPSPTGSSSSQDTGFGSQEGEES
IDGTPVRP
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacctaacgccagagcaatggcgagagattatgagcaagaagatgcggttctct
ccagagctcatcagtgccattcaggaggggaaaacagcgctgctgtgcggactgttgaag
acaggtgacggcatcacccgccagctggatgagtctgaggatcgccagtggagggaggcc
ctcaacctctccatccgcttgggcaacgaggatgccatggacgccctcctgcaaggagtc
aagtttgacttccggcagattcatgaggctctgctagtcgccgtggacaccaaccagcca
atagtagtgaagcgtctcctggaccgcttggatcaggagaaggggaacaagatggacgta
cgatccttctctcaggccatatttgatcgttctgttgacaactctcagtttgcccctggt
gtgacccctctgactttagcctgccagaaagacctgtacgacattgttaccatgctcacc
cagaaaggccacgtcatcccgtggccacataagatctcctgtgcctgtttggagtgttct
aacggccggcagtatgacctgctgaagttctccctgtctcgcatcaatacttatcgtggc
attgccagccgtgcctacctgtccatcacctctgatgatgccatgctcagcgccttcagt
ctcagcaaagaactccgtaagctgtcgcagaaagagccagagttcaagcctcagtacctg
agcctggagcagatctgtcaggagtttgcagtggagttgctgggcatgtgtcgcaaccag
agtgaggtatccactattctgaacagctgtggaaatgaaactcaggattccttggatgag
caagcctttgaggaaggaatccccagcttgtctcgcctgcggcttgcagtcaactacaac
cagaagcagtttgtggcgcacccaatctgccagcaggttctgtcctctatctggtgtggg
aaactggaaggctggagaggtagcagaacggcctggaagctgtttgtctctgtgggaatc
tttcttaccatgccccttctttgccttgtctactggattgcaccgaagtcaaagctggga
aagctagtaagaattcctgtgatcaagtttcttcttcactctgcatcctacctgtggttt
ctcattacattacttggggaatcgataaccatggagctatatcgggacacgtttgcttcc
cggcagcagaaccttctgcacagctccttccacatggtgtgggtggtcggattcttctgg
tatgagtgtaaggaagtgtggatcgaggggcttcggagttacttcctagactggtggaac
tgcttggacgtgatggtgctcagcatgtacctggcatcttttgcgttacgtgtgcttatc
ttgctcaaaggtttcttcctctgccatgatcatgatggcacagaggagtgtgtctacttc
acccagacttcacgtgacaattggcaccaagaagatcctcagctgattgccgaggtgctc
tttgcagtgaccagcatgttaagcttcacacgactggcatatatcctgccagcccacgaa
tctctgggaacactacagatctccatcggaaagatgattgatgatatgatgagatttatg
ttcatactgatgatcattggcaccgccttcctttgtggtatcaacaacatctatgttcct
tatgtcatttctccaaatcttggcaggtttaatgagaccttccgcttcctattctggacc
atgtttggcgttgtaaaccaggactatgtggacatgccagagtttgtgtttgcagaattt
gtaggaaggatcctgtatggtatcttcactcttgtcattgtcattgtccttctcaacatg
cttattgccatgataacaaactcctttcagaaaattgaggatgatgctgacgttgagtgg
aaatttgccaggtcaaagctgtacctcagctacttcagagagggcctcacgatgcctgtg
cctttcaacatcatcccctcccccaaagccattttttacatcctgaggggcatctttaga
cgaatctgctgctgctgctgcacttgttcctctgagcagaaatatccccccatagcctct
atatctaatgataaggggtctgaagatggccagttatcgtaccgtcagcaggtgatcagg
gcactggtgcagcgctacattgagtcagctcgcagggagtttgaggagaccaagaggaaa
gatattggaaatcgaatgactgagctaaataaagtggtcgccaggatgcacaacgatctg
aaagtcgcccagcagtatgcaatggatgatggacaggatacaagcgatgcactgaccaag
aatggctcctctgtactggggaaatacatcattggtgccaagaacaatttcagaggtttt
aacaccagacaagatgacaaatacacagctcttaaggtgactgtgcacagcaatgaggaa
aagctggataaagaaaagtttgaagcacagatggaatcagacattcaacagaatgaggtg
gatgaatgtagagacgagggacagtttcctgactctgttgtggtgaaaatggaggaaggc
cgagctcaggctgaacaagaggaaaagaaggaaattaagtcagacgagaaggagaaagca
gccaaaagtgaaattagtgtaaataaagtgaaagaggagaaaaaaggaggaaacggtttt
aacacagaagaaacggtgagtgatgaggccacgaacgaagaggcagaaaccctaagtgaa
ggagggatgaacaaagagggaagagtgacggatgaacacatgacctctgcacatgccgag
agcatcgaagtgagtgaaaccaaacaaataatcagcaagttcaatcacattgagctgcaa
gaaaaaaaagcagcacaaccgagctggatgaagggaagaaagcctgagcataatgtagca
gagaagtctcacaatgagaagagcaatgaaaaacctgaaatgaagaaaatgattccttca
cctacaggaagcagcagctcccaggacacgggctttggttcccaagaaggggaagaatcg
attgatggcacaccagtgagaccttaa
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