KEGG   Oreochromis niloticus (Nile tilapia): 100708601
Entry
100708601         CDS       T06104                                 
Symbol
nelfcd
Name
(RefSeq) negative elongation factor C/D
  KO
K15181  negative elongation factor C/D
Organism
onl  Oreochromis niloticus (Nile tilapia)
Pathway
onl03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:onl00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    100708601 (nelfcd)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:onl03021]
    100708601 (nelfcd)
Transcription machinery [BR:onl03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    NELF complex
     100708601 (nelfcd)
SSDB
Motif
Pfam: TH1 CARD_2 DUF4817
Other DBs
NCBI-GeneID: 100708601
NCBI-ProteinID: XP_003441549
Ensembl: ENSONIG00000019229
LinkDB
Position
LG5:24675644..24682217
AA seq 579 aa
MDEEYYSGSGDWEGTEGNMEDGYGEGENDGKIQEACLEKFSSRDYIMEPAIFSTLKTYFQ
AGGSPEHVIQLLSENYSAVAQTVNLLAEWLIQMGVEPAQVQERVENHLKSLLIKHFDPQK
ADSIFTVEGETPAWLEQMIAHTTWRDLFYKLAEAHPDCLMLNFTVKLISDAGYQGEITSV
STACQQLEVFSRVLRTSLAALLDGGEENLEKNLPEFAKMVCHGEHTYLFAQAMMSILAQE
EQGGSAVRRIGQEVQKSAHERGHDASQITLALGTAAAYPRACQALGAMLSKGALNPADIT
VLFKMFSSMDPPPVELIRVPAFLDLFMQSLFKPGSKINQDHKHKYIHILAYAASVVETWK
KNKRVNINKDELKSTSKAIETVHNLCCNENKGATELIAELGTLYQCIRFPVVAMGVLKWV
DWTVSEPRYFQLQTDHTPVHLALLDEICTCHQLLHPQVLQLLIKLFETEHSQLDVMEQLE
LKKTLLDRMVHLLSRGYVLPVVSYMRKCLEKLNTDISLIRYFVTEVLDVIAPPYTSDFVQ
LFLPILENDSIAGTIRTEGEHDAVAEFIAHCKSNFIMIN
NT seq 1740 nt   +upstreamnt  +downstreamnt
atggacgaggaatattacagcggttccggagactgggaaggcacggagggtaacatggag
gatggttacggtgaaggagaaaatgatgggaaaatccaggaagcttgcctggagaaattc
tccagtagggattacatcatggagcctgctatcttcagcaccctcaaaacgtattttcaa
gcaggtggctctccagaacatgtcatccagcttctctctgaaaattactctgccgtggct
cagactgttaatctgctggctgagtggctcatccagatgggtgttgagcctgcacaagtc
caagaacgagtagaaaatcacctcaagagtcttctgataaaacactttgacccccagaaa
gctgattccatcttcaccgttgagggagagactcctgcttggctcgagcagatgatagca
cacacaacgtggagagatctcttctataagctggcggaggctcacccagattgcctgatg
ctcaacttcactgtaaagcttatttcagacgcaggttaccagggcgagatcaccagcgtg
tccacagcctgccaacagctggaagttttctctcgggtgttgagaacatctttggccgcg
ctgctagacggaggagaagaaaacctggagaagaacctgcccgaatttgctaaaatggtg
tgtcacggcgagcacacctacctctttgcccaggcgatgatgtccatcctcgctcaggag
gaacagggaggttcagctgtccgcaggatcggccaggaggtgcaaaagtctgcacatgag
agaggtcacgatgccagtcagataacccttgcgcttggtacagcggcagcctaccctcga
gcctgccaggctctcggtgccatgttgtccaagggagccctgaatcctgctgatataaca
gttctgttcaagatgtttagcagcatggaccctcctcctgtcgaactgatcagagtgccg
gcctttctagacctgtttatgcagtcgcttttcaagcctggatcgaagatcaaccaagac
cataaacacaaatacatccacatcttggcctatgctgccagtgtggtggagacctggaaa
aagaacaagcgagtcaacattaataaagatgagctgaagtcaacctccaaggctattgag
accgtgcacaacctgtgctgcaatgagaacaaaggagccacagagctgatcgctgagctc
ggcactttgtaccagtgcatcaggtttccagtggttgctatgggagttctgaagtgggtg
gactggacggtgtccgagccgcggtacttccagctgcagacagaccacactcccgtccat
ttagctttactggatgagatctgtacgtgtcaccagctgctgcacccgcaggtcctccag
ctgcttatcaagctctttgagactgagcactctcagctggacgtcatggagcagttggag
ttgaagaagactctgctggaccgaatggttcacctgctgagccgtggctacgtcctgccc
gtcgtcagctatatgcgcaaatgtctggagaaactcaacacagatatctccctcattaga
tattttgtcactgaggtgctggatgtgatcgcgcctccctatacgtcggactttgttcaa
ctcttcttgccgatccttgagaacgacagcatcgcaggaacgatccgcacggagggagaa
cacgacgctgttgctgagtttatcgcccactgtaagtcaaacttcatcatgatcaactga

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