Oreochromis niloticus (Nile tilapia): 100708601
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Entry
100708601 CDS
T06104
Symbol
nelfcd
Name
(RefSeq) negative elongation factor C/D
KO
K15181
negative elongation factor C/D
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
100708601 (nelfcd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
onl03021
]
100708601 (nelfcd)
Transcription machinery [BR:
onl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
NELF complex
100708601 (nelfcd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TH1
CARD_2
DUF4817
Motif
Other DBs
NCBI-GeneID:
100708601
NCBI-ProteinID:
XP_003441549
Ensembl:
ENSONIG00000019229
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Position
LG5:24675644..24682217
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AA seq
579 aa
AA seq
DB search
MDEEYYSGSGDWEGTEGNMEDGYGEGENDGKIQEACLEKFSSRDYIMEPAIFSTLKTYFQ
AGGSPEHVIQLLSENYSAVAQTVNLLAEWLIQMGVEPAQVQERVENHLKSLLIKHFDPQK
ADSIFTVEGETPAWLEQMIAHTTWRDLFYKLAEAHPDCLMLNFTVKLISDAGYQGEITSV
STACQQLEVFSRVLRTSLAALLDGGEENLEKNLPEFAKMVCHGEHTYLFAQAMMSILAQE
EQGGSAVRRIGQEVQKSAHERGHDASQITLALGTAAAYPRACQALGAMLSKGALNPADIT
VLFKMFSSMDPPPVELIRVPAFLDLFMQSLFKPGSKINQDHKHKYIHILAYAASVVETWK
KNKRVNINKDELKSTSKAIETVHNLCCNENKGATELIAELGTLYQCIRFPVVAMGVLKWV
DWTVSEPRYFQLQTDHTPVHLALLDEICTCHQLLHPQVLQLLIKLFETEHSQLDVMEQLE
LKKTLLDRMVHLLSRGYVLPVVSYMRKCLEKLNTDISLIRYFVTEVLDVIAPPYTSDFVQ
LFLPILENDSIAGTIRTEGEHDAVAEFIAHCKSNFIMIN
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggaatattacagcggttccggagactgggaaggcacggagggtaacatggag
gatggttacggtgaaggagaaaatgatgggaaaatccaggaagcttgcctggagaaattc
tccagtagggattacatcatggagcctgctatcttcagcaccctcaaaacgtattttcaa
gcaggtggctctccagaacatgtcatccagcttctctctgaaaattactctgccgtggct
cagactgttaatctgctggctgagtggctcatccagatgggtgttgagcctgcacaagtc
caagaacgagtagaaaatcacctcaagagtcttctgataaaacactttgacccccagaaa
gctgattccatcttcaccgttgagggagagactcctgcttggctcgagcagatgatagca
cacacaacgtggagagatctcttctataagctggcggaggctcacccagattgcctgatg
ctcaacttcactgtaaagcttatttcagacgcaggttaccagggcgagatcaccagcgtg
tccacagcctgccaacagctggaagttttctctcgggtgttgagaacatctttggccgcg
ctgctagacggaggagaagaaaacctggagaagaacctgcccgaatttgctaaaatggtg
tgtcacggcgagcacacctacctctttgcccaggcgatgatgtccatcctcgctcaggag
gaacagggaggttcagctgtccgcaggatcggccaggaggtgcaaaagtctgcacatgag
agaggtcacgatgccagtcagataacccttgcgcttggtacagcggcagcctaccctcga
gcctgccaggctctcggtgccatgttgtccaagggagccctgaatcctgctgatataaca
gttctgttcaagatgtttagcagcatggaccctcctcctgtcgaactgatcagagtgccg
gcctttctagacctgtttatgcagtcgcttttcaagcctggatcgaagatcaaccaagac
cataaacacaaatacatccacatcttggcctatgctgccagtgtggtggagacctggaaa
aagaacaagcgagtcaacattaataaagatgagctgaagtcaacctccaaggctattgag
accgtgcacaacctgtgctgcaatgagaacaaaggagccacagagctgatcgctgagctc
ggcactttgtaccagtgcatcaggtttccagtggttgctatgggagttctgaagtgggtg
gactggacggtgtccgagccgcggtacttccagctgcagacagaccacactcccgtccat
ttagctttactggatgagatctgtacgtgtcaccagctgctgcacccgcaggtcctccag
ctgcttatcaagctctttgagactgagcactctcagctggacgtcatggagcagttggag
ttgaagaagactctgctggaccgaatggttcacctgctgagccgtggctacgtcctgccc
gtcgtcagctatatgcgcaaatgtctggagaaactcaacacagatatctccctcattaga
tattttgtcactgaggtgctggatgtgatcgcgcctccctatacgtcggactttgttcaa
ctcttcttgccgatccttgagaacgacagcatcgcaggaacgatccgcacggagggagaa
cacgacgctgttgctgagtttatcgcccactgtaagtcaaacttcatcatgatcaactga
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