Oreochromis niloticus (Nile tilapia): 100708639 Help Entry 100708639         CDS       T06104                                  Symbol synpo2 Name (RefSeq) synaptopodin-2 isoform X2   KO K24066   synaptopodin-2 Organism onl  Oreochromis niloticus (Nile tilapia) Pathway onl04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:onl00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     100708639 (synpo2)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04990 Domain-containing proteins not elsewhere classified [BR:onl04990]     100708639 (synpo2) Domain-containing proteins not elsewhere classified [BR:onl04990]  PDZ domain-containing proteins   Other PDZ domain-containing proteins    100708639 (synpo2) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  PDZ PDZ_6 Pept_S41_N_bact Motif Other DBs NCBI-GeneID:  100708639 NCBI-ProteinID:  XP_005468256 Ensembl:  ENSONIG00000032796 LinkDB All DBs Position LG3:12455968..12475734 Genome browser AA seq 1498 aa AA seqDB search MGTGGYICVTLRGGAPWGFTLREGEGDTHRPLLVSQVEEGGRASLVGVQDGDEVVSINGE PCADLTLLRAFALIDTSVDCLQLLVRRYHSILTEDYESDEMQSSERASAGETLESTTLHI FPPKQTSQIPNPESPDETYSKEFNINTEFSKEGQLLCTQLHVPSSKEEDDKVQRCFSPGD MVELQVSLSEQTLDDVGCASLGSARGIDGDLSNREAVEAVHITNAATALRSVREPLSHHG VVLNSPLMLGQVEVILEASGVGRGLQSGGGTQDRETVGSQSEGEEEDCSPAEEQDSDSEG VQDKPNKHRARHARLRRNESISEKQLKEAKSKCKRIALLLTAAPTNPNNKGLLMFKKHRQ RAKKFTLVSYGTGEDEPEYSDEEYEENLDSRQETFILVAPNESEIDKPFLTSTHSGKSVL TLTLDKGLLEIERNLKNQAEMESLPETKGKGALMFAQRRQRMDEISAEHEELRRQGIPVE AVQEAEKKIVEHSYMQSAAEGRSYMDVNVHQQTQQQYQQFQEQQYYEQQQNYQQQQQQQY QQQYQQQYQQQQYEQSHYQQQQMYHQQQEYHQEQQKMQQYSATVNGTVQHQTNEMQSSFS NRTAKPFSADNMAPTPYSHATSGTNQDSVGQGEQIATRDERISTPAIRTGLLLDSKKKNA AKPMFTFKEAPKVSPNPALLNLLNKGDKKPGFESGPEDDYLSLGAEACNFLQSQRVKHKI PPPVAPKPVINPNSPPWSSQIEATNQEMPQCAENSLSTPAAAPTAETTPAPQLEPTPAPA PESSPPAAPQENPGSTNKEEQHTWPLPEPESQQQPTQAVAQEANGHMNSTLQSESSAVTT WGAAQTQVQQQLSSSSWHSAQVQPSDPPPRQSSPHPPWVSHQPTQNQAQQPPTSTWTPQI QQSWTQPPEQSQAQAHVQPSWAQSREQPQSQPQVHPPWAHSTEQPHLQQMQPNWSQAQEQ MQPQHQNQWTQPSQTDSQHQPAWMQQPHKKSQAQTPWVQGVQPESQPQPPWVQQAQHQAP PQLWPQTEAPGQPQPPWVSAQPQQQQLPSVNAWAPSQTQPQAQPPWIQVAQPQPQAQPQA NLNPWAPVPAQTQSQPPWAQHPPEHGQHHISSWTQEQDQARHQSPWAQPVPAQPAPQPKW QQPTSKSPPQPPMNTWQPAQTQPQTPVNAWTPQSQQKPVNISTLTVNTRPSPKPWQPPQN APQSRSPPTPPQRMHSFTIGQRVSSPINPMATVLNPSSQGSAFEMPAVKGKGADMFAKRQ SRMEKYIVDSETVEANKASRSTSPAASLPNEWKYTPNAPGRSYSLSPPARVQSAGQKSVS TSSSPKPPALGSTTPSARQTSWVEKSQKPLTPWEAASRHPMGLVDEAFAFQSLQQTLASN VCLAAQRKILPEPPAEWKARVSYQAPQKTGSQTWSQSQSQSRSLSRASLPSFVSPVRSSI FTPVSHAGYRSLPRQWQPQKSATEANPRPSVSSFESKSPFGKQTCKSVYTINTWSWRR NT seq 4497 nt NT seq  +upstreamnt  +downstreamnt atgggcaccgggggttacatctgcgtaacgctgcgcggtggtgcgccctggggattcacc ctgcgagagggagaaggggacacccacagacctcttctagtttcccaggtagaggagggt ggtcgtgcctccctggttggagtacaggatggagatgaggtggtgtcaatcaacggggag ccgtgtgctgacctcacccttttacgagcgtttgcgctaatcgacacatcagtcgactgt ctgcagctgctagtcagaagataccactccatcctcactgaagactatgaatcagatgaa atgcaaagcagtgagagggcctctgctggtgagactttagagagcaccacccttcacatc ttccccccaaagcaaacatcccaaatcccaaatcctgaatccccggatgaaacctacagc aaagagtttaatatcaacacagagttttccaaggaaggccagctgctttgcactcagcta catgttccctcatctaaggaagaagatgataaagtacagcggtgcttctcaccaggggac atggtggagctccaggtgtccctgtctgagcaaaccttggatgatgtgggttgtgcctcg ctcggaagtgctcgtgggattgatggggacctctcaaaccgggaggctgtggaggctgtc catatcaccaatgctgccactgcattgcgctccgtcagggagccgctaagccatcatgga gtggttctcaactcccctttaatgctggggcaggtggaggtcattttggaggcatcagga gtagggaggggcctccagagtggaggtggcactcaggacagggaaacagttggttctcaa agtgaaggagaagaagaggactgcagtcctgcagaagagcaggactctgattctgaagga gttcaagacaaacccaacaagcatcgggctaggcatgccaggctcaggcgcaacgagagc atttcagagaaacagctaaaggaagccaagtccaaatgtaaacgaattgcccttcttctt acggctgctccgaccaaccccaataacaaggggctgttgatgttcaagaagcatcgtcag agagctaagaaattcacgctggtgagctacggcacaggagaagacgagccagagtacagc gacgaggagtacgaggaaaacctggacagcagacaagaaacctttatccttgtggcccca aacgagtctgaaatagataagccttttctcactagcacccacagtggcaaaagtgtgcta actttgaccttggacaagggtcttcttgaaatcgaaaggaatttgaagaaccaagcagag atggaatctttgcctgaaaccaaaggcaagggtgcgctgatgtttgcccagcgtcgccag aggatggatgagatttctgccgaacacgaggagcttaggcgccaagggatccccgttgaa gcggtgcaagaggctgaaaagaaaatagtggagcattcctacatgcagtccgctgcagaa ggccgcagttacatggatgtaaacgtgcaccagcaaacccagcaacagtaccagcagttt caagaacaacagtactatgagcaacagcagaactaccaacaacaacaacaacaacaatat cagcaacaatatcagcagcaatatcagcaacagcaatatgagcaaagtcactatcagcaa cagcaaatgtatcaccagcagcaagaatatcatcaggagcaacaaaaaatgcagcagtat tcagcaactgtcaatggcacagtccaacatcaaacaaatgaaatgcagagctctttcagc aatcgtactgcaaagcctttctcagcagacaacatggcgcccaccccttattctcatgca acgagtgggaccaatcaagattctgtgggtcaaggggagcagattgctacccgtgatgag cgcatttctactcctgcaatcaggacgggccttttgttggattcgaagaaaaagaatgca gccaagcctatgttcacatttaaggaagccccaaaagtatccccaaacccagcattgctg aacctcctaaacaaaggtgataaaaagcccgggtttgaatcaggacctgaggatgactat cttagtcttggagccgaggcttgtaatttccttcagtctcagcgtgtcaaacacaagatt cctccaccagttgccccaaagcctgtgatcaatcccaactcacctccttggtcctcgcag atagaagcaaccaaccaggagatgcctcagtgtgctgaaaatagtctatccacacctgct gcagcccccaccgcagagactactcctgctccacaactagagccaacccctgcacctgcc cctgagtcttctccccctgctgcaccccaggagaatcctggcagtaccaacaaagaggaa cagcacacatggccgctgccagaacccgaatctcaacaacagcccacacaagctgtagct caagaggcaaatggtcatatgaattctacactgcagtctgagtcgtctgctgtgactacc tggggtgcagctcaaacacaagtgcaacaacagttatcttcaagttcttggcattcagct caagtgcagccctcagacccacctccaagacagtcctcacctcacccaccttgggtatca catcagcctactcagaaccaggcacagcaacctcccacaagtacttggacccctcaaatt cagcagtcctggacgcagcctccagagcaatcacaagcccaagcacatgttcagccatcc tgggcccagtcacgagagcaaccccagtctcagccgcaggttcacccaccttgggcacac tctactgagcagccacatctacagcaaatgcagcccaattggagtcaagcccaagaacaa atgcagccacaacaccagaaccaatggacacagccatcacaaacagactctcaacatcaa ccagcatggatgcaacaacctcataaaaaatcccaagcacaaactccttgggttcaaggg gtacaaccagaatcccagccacagccgccatgggttcagcaagcacaacatcaggctcct ccacaattatggccacagactgaagcaccaggtcagcctcaaccaccttgggtatcagct cagccacaacagcaacagctaccctcagtgaatgcatgggccccatcacaaactcaaccc caagctcagccaccctggatccaagtagctcaaccacaacctcaagcacagcctcaagcc aatttaaatccatgggcgccagtacctgcccagactcagtctcagcctccatgggctcaa caccccccagagcacggtcaacaccacataagttcttggactcaagagcaagatcaggcc cgccatcagtctccatgggctcaacctgttccagcccagccagcaccacagccaaagtgg caacagcctacatcaaagagtccaccacaaccaccaatgaacacatggcaaccagctcag acacagcctcagacacctgtgaatgcctggactccacaatcacagcaaaaacctgtgaat atttccacactgacagtgaacactcgcccctctccaaaaccttggcaaccaccacaaaat gctccacaaagccgatcccctcctactccgccacagcgaatgcactctttcactattggt caaagagtttcatcgcccatcaacccaatggctactgtcttaaacccatcatcccagggt tcagcatttgagatgccagctgttaaaggaaaaggagctgatatgtttgcaaagaggcag tctcgaatggagaagtacatcgtggactctgagacggtggaagcaaataaggcaagcagg tcaacatcaccagcagcttccttaccaaatgagtggaaatacactcccaatgcccctggc aggagctactccctttctccaccagccagagtacagtccgcgggccagaagtcagtttca acttcttcctccccaaagcccccagcactgggctccacaactccctcggcaaggcagaca tcctgggtggaaaaaagccaaaagcccctcacaccatgggaggctgcctcccggcatccc atgggcctggtagatgaagcttttgctttccagagcctccagcaaacccttgcctcgaat gtgtgcttggcagcccagcgcaaaatcttgcctgagccgccagcagagtggaaagccagg gtttcttaccaagcaccgcagaagacaggcagccagacttggagccagagccagagccaa agccggagcctgagtcgagcttcgctcccatcgtttgtgtcgccagtaaggagctctatc ttcaccccagttagtcatgccggttacaggtccctgcccagacagtggcagcctcagaaa tctgcgacagaggctaacccgaggccctcggtgtcttcatttgagtctaagagccctttc ggaaagcaaacttgcaagtctgtgtacaccatcaacacttggagctggaggcggtag

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