Oreochromis niloticus (Nile tilapia): 100708738
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Entry
100708738 CDS
T06104
Name
(RefSeq) protein capicua homolog isoform X3
KO
K20225
capicua transcriptional repressor
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
onl03000
]
100708738
Transcription factors [BR:
onl03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
100708738
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HTH_Cic_C
DUF4819
HMG_box
HMG_box_2
Zf_WRKY19
Motif
Other DBs
NCBI-GeneID:
100708738
NCBI-ProteinID:
XP_005459148
LinkDB
All DBs
Position
LG22:9676356..9729042
Genome browser
AA seq
2353 aa
AA seq
DB search
MKPIKKRSPPSTRAKGGKRRGAGDTLEGGEKRDSDENRDRSRSPQNRTPSSSLSSNSHSE
SPQVDASRARDSSDGEGLSEATVMGKLSSSSDDRSGRSAASSGGGSSHCDSSGSSCSNSS
TPSANNSPNPASSRKTATFKARVPKKKYTSEHCSSNTAGNHSNPASSTPPPFSLSQESAG
PGIDISVSHSDGSGQSRSLMDDFHSRTTSREGSQDSPGPPTLSLGGEKPRGGEGVTDAEQ
VSPSPLPRCSSTDTASEHSADLEVVGDTPPQMSTHRTSSLPDALSDALAKGLKNQRILAR
QLRRRSDEEGGSDRRHDLVFRAGVVRNVSGEYGSLEVQLNGEKTLCRYPYRHDSPPGVVD
IILDAPPPGVHQVPIGTRVCVPFGNEEGSEGQWQWYREGVVTQVDPHPAVANRYRVLLSE
ERPHSLDDEEDGRGAPQAVWVSRQTLRLLVPPWDLDLPSAGGHEVEEGVRDKEREREERE
EMDVEVSRLSRGMTPSMGSMLGRGMPYPGMVPVSSTSGHSITSPVTPTSVLSLAPGRERE
IEKDLEWESQRNHGRERERQRERENSVQQQYTPLTPEEDMEVSGFNMVQMGQIISAGKPM
AVPQHRHIVSKTPSGYLNPHPHLSVVRGIGIPPAHMTLNPHPSPSPVLLGLDPAAAAAAA
AAGAVITTPQLHPLPPITSSTTSSSRVDKTSGGGSASSGAGGGSGSGSTSSSSSRSRTPL
TAAQQKYKKGDVVCTPTGIRKKFNGKQWRRLCSREGCSKESQRRGYCSRHLSMRTKEMEA
GGGGRDRGGASSTGTLTPSDLRLSGGRASSEFDWDETSRESSEASSRGGDSRPRLVLPSL
LPQDLSRFDFDECEAATMLVSLGGSRSGTPSFSPISNQSPFSPTPSPSPSPLFGFRPANF
SPINATASLTPRRPRQLSGTKMGTPGAERERHLSGIVPTFQTNLTFTVPMSPSKRKFDSH
PPPPLPAVQDYQTKPEQQQLVGVGGGVVGDPPMGHSPAAFRVLSPQSQPTTPSSLSFPRP
RSATSRPPSSAASTPPPMLVSPTPPSPLPQEPSPRRIVPLRDSPVIVRNPDVPLAKFSDG
PSGKRERSRSREHSQHTAPPGLQAPVPINGAATNGAVLLRNPTSTLVLVTSSSSLTPATG
GHASLSSPSTPGSMSSSSSSVFSSSGSGGRERKPEGHQDASGGALPQPVACHPTPTALLP
LILPAESPHPAPRKQIIMGRPGTVWTNVEPRSVPVFPWHSLVPFLEPSQSGAAAQPVDGQ
QLVNQSKEPRCGVALVSDGRSGPPDLERGSPSCPPPTNDNPPTDRGGVDSEMESDTDDPF
SPGLANDPSPSTGTIKRRTQSLSALPKDGDRKREKDHIRRPMNAFMIFSKRHRALVHQRH
PNQDNRTVSKILGEWWYALGPNEKQQYHDLAFQVKEAHFRAHPDWKWCNKDRRKSLSEGR
GTPKEPRERSMSESIDAHSESQVLEGKGGGSGWPGASERRGGMFGGPSHRPRAFSQSAVH
TLEQREWERDLEKEDGASLFRGRPPPQSLYQGGASEDVTSDEERMVICEEEGDDDVMEDS
CPEGSIDLKCKERVTDSDEDEPDGQHGFQPVARSSLPSSSPSIIHSDSSSAKGNGGGNGG
GPEDGSEKKRKRGADGGEDESDGALKTEQAAAGGGEGNGGGGQGVSSLSIAQPPPPLAQQ
SLTPVGVRMAPTMVTNVVRPIASTPIPIASKPVEGAITLSTLPQDKKATLLIGGGGAQQL
PITAGVQTQSPVLQSKMLVPMATVRTGSTPPHPSISLVAPPLPVQNGPATGNKIIQIASM
PVVQTNVHPSGAATVHPGSPYPVSVATVMTPGAAPPQTVLLTSPPTRITYVQSGPGVTTA
THQQGPQPPGPAYLQSSLATLGFTAIAPAPQTLVQPVVGQPPLLAPAQPLSCQSQSSPGQ
TAATTGRQVLTAIYPAPPVALPTGVVSVTPVPPAGAAPAQDVANPPSPLAVGLQGSAVAT
PQPGMGTEVEVKHESQLDAQSDAQGLSSCVTSSSTGTCTSSIIAVKKEEDTTLRIKEENL
RDGYEREKQSEMDDERESCDKKRGRETEREELSTGNSSKEAGPRSPPPPPPSGLEPPPPP
PAERDPPSSSKKTKFRPPPLKKTPDPHDKLLSETYFEERFAELPEFNPEEVLPSPTLQSL
ATSPRAILTSYRKKRRNSTDLELTGEDPSSPRRKTRRLSSCSSEPNTPKSAAKCEGDIFT
FDRAGPEGEVPPGELDRVSYSSLRRTLDQRRALVMQLFHDHGFFPSAQATAAFQARYSDT
FPNKVCLQLKIREVRQKIMQTATPGAFESGALAEASPASSHSSSFNQSTREDAGVEQQGD
KGRSPEEPKSEGS
NT seq
7062 nt
NT seq
+upstream
nt +downstream
nt
atgaagccaataaaaaagcgctcccctccctctacccgggctaaaggaggaaagcggcga
ggagcgggggataccctggaaggaggagagaagagagactcagatgagaacagagacaga
agcagatctccgcaaaaccgaactccctcctcctcgttatcttctaactcacattcagag
tctcctcaggtggacgcatccagagcgcgagactcttcagatggggaggggctgtcagaa
gcgacagtgatggggaaactgtcatcatcctccgatgacagatcggggaggtctgctgcg
agcagcggtggtggcagcagccactgtgacagcagtggcagcagttgtagtaacagtagt
acaccaagcgccaacaacagtccaaaccccgcctccagccggaaaacagccaccttcaag
gcccgcgtccccaaaaagaagtacacctccgaacactgctcatctaatactgctggtaac
catagcaaccctgcatctagcacgccccctcctttttctctgagccaggagtcagcgggt
ccaggaatcgacatcagcgtctcgcattctgacggaagcggtcagagtaggagcttgatg
gatgacttccacagtcggaccaccagcagggaggggtctcaggactccccaggaccgcca
accctgtcgcttggaggggaaaaacccagaggaggcgaaggagtgacagatgcagagcag
gtgtccccaagcccgttgccccgctgctcctcaacagacacagccagcgagcactcggct
gacctggaggtagttggtgacacaccccctcagatgtcaacacacagaacgtctagtctc
cctgacgcactgtccgatgctctggccaaagggctgaagaatcagcggatccttgcccgc
cagctcaggagaagaagtgatgaggagggaggaagtgacaggaggcacgacttggtattc
cgggctggcgtggtccgtaacgtcagtggtgaatatggaagcctggaggtgcagctgaac
ggggagaagacgttatgccgctatccataccgacatgatagccccccaggggtggtggac
attatcctagatgccccacctcctggtgtgcatcaagtacctataggcacccgtgtctgt
gtaccatttggcaacgaggagggcagcgagggccaatggcaatggtaccgagaaggtgtg
gtgacacaggtagacccacaccctgcggtggctaaccgctaccgtgtcctgctgtctgaa
gaaaggcctcattctctagatgatgaagaagacggcaggggtgctccccaggcagtatgg
gtctccagacagacactccggcttctggtgccaccctgggacttggatttgccttctgct
ggtggacatgaagtagaagagggggtaagagacaaggagagagagcgggaggaaagggaa
gagatggatgtggaggtgagccgtttgagtcgaggaatgaccccgagcatgggatcaatg
ttagggagaggaatgccctacccaggaatggttcccgtttcctccacatcgggccacagc
atcacctcgcccgttactccgacttcagtcctcagcttggctcctgggcgagagagggaa
atcgagaaggacttggagtgggagtcacagagaaaccatggaagagagagggaaagacag
cgagaaagggaaaacagtgtacagcagcagtatacgcccctcacccctgaagaagacatg
gaagtgtccggcttcaacatggtccaaatggggcagattatatctgcgggcaagcctatg
gcagttccccaacatcgtcacattgtttctaagaccccgtctggctacctcaacccccat
ccccacttgtctgtggtgcggggcatcgggattccccctgctcacatgaccttgaatccc
cacccctctccttcacctgtcctgttaggccttgacccagcagctgcagcagccgcagca
gcagctggagctgtcattaccacccctcagctccatcctctccctcccatcacctcttcc
actacatcctcctccagagtggataagacatcggggggaggttctgccagcagtggagca
ggtggtggatccggatcaggttcgacctcctcctcctcgtcacgttcccggactccactg
acagctgcccagcaaaaatacaagaagggagacgtggtgtgcacgccgacaggcatccga
aagaagttcaacgggaaacagtggaggagactgtgctctcgggagggctgctccaaagag
tcccagcggcgagggtactgctccagacacctctccatgaggaccaaggagatggaagcc
ggtggagggggccgggatcggggcggcgccagcagcacagggaccctaacaccatctgac
ctccgactcagcggtgggagagccagttcagagtttgactgggatgagacatcacgggag
agcagtgaggccagcagccgtggaggagactctcgaccccgcctcgtccttccctcgctg
ctcccccaggacctttctcgcttcgacttcgatgaatgtgaggcggcgaccatgctcgtc
tctctcgggggctctcgttctggcacgccttcattctcccccatctccaaccagtcaccc
ttctcacccacgccatccccatcaccctctccgctcttcggtttccgccctgccaatttc
agccccatcaatgctactgcctcacttaccccacgccgcccccgacagctaagcggcact
aagatgggtacgccaggcgcagagagagagcgccatctgtcagggattgtgcccactttt
cagactaacctgacttttacagtcccgatgagccccagcaagaggaagttcgactcccac
ccgcccccaccgctacctgctgtccaggactaccagaccaaacctgaacaacagcagctg
gtgggtgttgggggtggggtggtgggagacccacccatgggccacagccctgctgccttc
agagtgctctccccccagagtcagcccacaaccccttcctcactttccttccctcgtcct
cgtagcgccaccagcaggccaccatcctctgccgcctccacgcctccacccatgttagtc
tctccaactcctccttcaccacttccccaggagccgtccccacgccgcatcgtgcccctc
cgggactccccagtcattgtacgcaacccagatgtccccttggccaaattctccgatggc
ccgtcaggaaagagagagagaagcaggtcgagggagcacagccagcacacagctccccca
ggcctgcaggcccccgtccccatcaacggggcagccaccaatggggcagttctcctccgc
aaccccacatccacgctcgtcctggtcacatccagctcgtccttgactccagccacaggg
ggccacgcttccctgtccagcccctccactcctgggtccatgtcttcttcatcaagctct
gtgttctcctcgtctggttccggaggcagggagaggaaacccgaagggcaccaggacgcg
agtggaggggcgctgccacagccggtagcctgtcatcccacaccaacagccctgctgccc
ctcatactgccagcagagtcgcctcaccctgctccacgcaagcagatcatcatgggacgc
ccagggaccgtttggaccaacgtggagcctcggtcggtgccagtgttcccttggcattcg
ctggtccctttcctggagcccagccaatcaggagcggctgcccagcccgttgatggccaa
cagcttgtcaatcagagcaaagagcctcgctgtggtgtagctctggtgagtgacgggcgg
tcaggtcctccagacctggagagaggatcgccatcatgtccacccccaaccaatgacaat
cctcctacagacaggggtggggtggacagcgagatggagagtgacacagatgacccattt
tccccgggtttggccaacgatccatcgccttccactggaaccattaagagacgcacacag
tccctcagtgcactgcctaaggacggagacagaaagagggagaaggaccacatccgccgt
cccatgaatgccttcatgatcttcagtaaacgccaccgggccctggtgcaccagcgacat
cccaaccaggacaaccgcacagtcagcaagatcctgggcgagtggtggtacgctttaggg
cccaatgaaaagcagcagtaccatgatctggcctttcaggtgaaagaggcccacttcaga
gcccacccagactggaagtggtgtaacaaggaccgcagaaagtctctgtcagagggccgg
ggtaccccaaaggagccacgggagaggagcatgtcagagagcatagatgcccactcagag
tcccaggtgctggaagggaaggggggaggctcgggatggccaggggcatcggagcgtcga
ggagggatgtttggggggccgtctcaccgtccccgagccttttcccagagtgcagtgcac
accctggagcagagggagtgggagagagacctggagaaggaggacggcgcaagtttgttt
cgcggccgtccgccgcctcagtcgctgtaccagggtggggccagcgaggacgtgactagc
gatgaggagcgcatggtcatctgtgaggaagagggagacgatgatgtcatggaagattca
tgtcctgaaggctccatcgacctcaagtgtaaagagagggtgacagacagcgatgaggat
gaacccgatggacagcatggcttccagcctgtggctcgctcctctctcccctcctcctct
ccctccatcattcactccgactcctcctcggctaaagggaacggtggcggtaacggagga
ggtcctgaagacgggtcagagaagaagagaaagagaggcgcagacggaggagaggatgag
agcgatggagccctaaagacagagcaagcagcagcgggtggaggagaaggaaatggagga
ggtgggcaaggtgtctcctctctctccatcgcccagcctcctccaccgctggctcagcag
agtttgaccccggtcggcgtccgcatggcccccacgatggtgaccaacgtcgtgcgcccc
atcgccagcacgcccatccccatcgccagcaagccggtggaaggagccatcaccctcagc
accctgccacaggacaagaaagccactctcctgattgggggtggaggtgctcagcagctg
ccgatcacagcaggggtccaaacccagtcgccagtcttgcagagcaagatgttggttccc
atggcaacagtgagaaccgggtctactcctcctcatccttccatttccctggtggctccg
cctcttcccgtgcagaacggccctgcgacaggaaacaagatcatccagatcgcttccatg
cctgttgtgcagaccaacgtccaccctagcggtgcagcaacagtacatcctgggagcccc
tatcctgtttccgtggcaacggtgatgactcccggtgctgcgcccccacagacagttctc
ctgacctctccacccaccaggatcacgtatgttcagtcaggtccaggtgtcaccacggca
acgcaccagcagggtccacaaccccctggtcctgcatatctccagtcttctctggcaacc
ctgggcttcaccgccatcgccccagctccacaaaccctggttcagccagtcgttggtcag
cctccgctacttgccccagctcagcctctaagctgtcaatcacagagctctccgggacag
acagcggccaccaccggtcgtcaggtactaactgccatctaccctgcaccacccgttgct
ctgcccactggtgtggtctcagtgacgcctgtgccgcctgcaggggcggctccagctcag
gacgtggcgaaccctccctctccgctggctgtagggctgcagggttcagcggtggcgacc
cctcagcctggcatgggaacagaggtggaggtgaagcacgagagccagctggatgctcag
agtgacgctcaggggttgtcgagctgtgtcaccagctcctcgacgggcacctgtacaagc
agcatcatcgcagtgaaaaaagaggaggacaccactttgcgcatcaaggaagaaaatttg
agagatggatatgagagagagaaacaaagtgagatggacgacgagcgagagagctgtgac
aagaagcgaggcagagagacggagagagaggagctcagcacgggcaacagcagcaaagag
gctggacctcgttccccacctccaccaccaccctcaggtttggaaccccctcctcctcca
cctgcagaaagagatcctccctcttcctcaaagaagaccaagtttcggcccccgccactc
aaaaagacgcctgaccctcatgacaagctcctctcggagacgtactttgaggaacgcttt
gctgagctgccagagtttaacccagaggaggtccttccctcgcccactctgcagagtctg
gccacctcaccgagagcaatcctgaccagctaccgcaagaagagacgcaactccacggac
cttgagctgactggggaagacccgagctccccgaggagaaagactcgtcgcctgtccagc
tgcagctcagagcccaacacccccaagagcgccgccaagtgtgagggagacatctttacc
ttcgacagagcaggtccagaaggcgaggttcccccgggagaattagacagggtttcgtac
tcgtctctgcgcagaacattggatcagcgtcgggccctcgtcatgcagctgtttcatgac
catggcttcttcccctcagctcaggccacagctgccttccaggcgcgctactcagacacg
tttcccaacaaggtgtgcctgcagctgaaaatccgcgaagtccgtcagaagatcatgcag
acggccacgccaggagccttcgagtccggagcgttggccgaagccagccccgcctcttcc
cacagctcctcttttaatcaatcaacccgggaggatgcaggggtggagcagcagggagac
aaagggcggagccccgaggagccgaaaagcgagggatcgtaa
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