KEGG   Oreochromis niloticus (Nile tilapia): 100708841
Entry
100708841         CDS       T06104                                 
Symbol
rnf4
Name
(RefSeq) E3 ubiquitin-protein ligase RNF4 isoform X1
  KO
K22651  E3 ubiquitin-protein ligase RNF4 [EC:2.3.2.27]
Organism
onl  Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:onl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:onl04121]
    100708841 (rnf4)
Enzymes [BR:onl01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     100708841 (rnf4)
Ubiquitin system [BR:onl04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    100708841 (rnf4)
SSDB
Motif
Pfam: zf-RING_2 zf-C3HC4_2 zf-RING_UBOX zf-C3HC4 zf-RING_5 zf-C3HC4_3 Prok-RING_4 zf_RING_Vps8 zf-RING_4 zf-rbx1 Rtf2 zf-C3HC4_4 IBR_1 zf-RING_6 zf-RING_11 zf-UDP TRAF3_RING TerY_C MSP1a zf-RING_16 Zn_ribbon_6 zf-ANAPC11 zf-Nse zf-LITAF-like
Other DBs
NCBI-GeneID: 100708841
NCBI-ProteinID: XP_003458706
Ensembl: ENSONIG00000028573
LinkDB
Position
LG2:complement(36318523..36326748)
AA seq 189 aa
MSSSVQRKRRSTQSPPVSRHNAKSGRAASTRRTANADSDPTPPTETIDVVDGEEEVVVDL
TCESGAEAAVVDLTTNNDSVLLVDEGPQNWRPPVQSYLVSSDEDEDTPPVLSATLLPPTN
TSRSTPGTISCPVCLDGYSEIVGSGRLVVSTRCGHVFCSQCLRDSLTSSHTCPTCRKRLT
HRQYHPLYI
NT seq 570 nt   +upstreamnt  +downstreamnt
atgagcagctctgttcagaggaagaggcggagcacacaaagtcccccggtttctagacac
aacgccaagagcgggagagctgcgagtaccaggaggacggcgaacgccgacagtgatccc
acccccccaacagagaccattgacgtggtggacggtgaggaggaggtggtcgtggatctc
acctgtgagagtggagcagaagctgctgtggtcgacctgactaccaacaatgactctgtg
ctgctggtggatgagggtcctcagaactggagaccacctgtacagagttatcttgttagc
agcgatgaagatgaagacacaccccccgtcctcagtgccaccctcctgccaccgacaaac
acctccaggtcaactccagggacaatcagctgtcctgtgtgtctggacggatactcagag
atcgttgggagcggccgattggtcgtgtccacccgttgtggtcacgtgttctgcagtcag
tgtttgagagactctctgacatcatcacacacctgtcccacctgcaggaagagacttact
caccgccagtaccaccccctgtacatctga

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