Oreochromis niloticus (Nile tilapia): 100708841
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Entry
100708841 CDS
T06104
Symbol
rnf4
Name
(RefSeq) E3 ubiquitin-protein ligase RNF4 isoform X1
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
onl04121
]
100708841 (rnf4)
Enzymes [BR:
onl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100708841 (rnf4)
Ubiquitin system [BR:
onl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100708841 (rnf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
zf-RING_5
zf-C3HC4_3
Prok-RING_4
zf_RING_Vps8
zf-RING_4
zf-rbx1
Rtf2
zf-C3HC4_4
IBR_1
zf-RING_6
zf-RING_11
zf-UDP
TRAF3_RING
TerY_C
MSP1a
zf-RING_16
Zn_ribbon_6
zf-ANAPC11
zf-Nse
zf-LITAF-like
Motif
Other DBs
NCBI-GeneID:
100708841
NCBI-ProteinID:
XP_003458706
Ensembl:
ENSONIG00000028573
LinkDB
All DBs
Position
LG2:complement(36318523..36326748)
Genome browser
AA seq
189 aa
AA seq
DB search
MSSSVQRKRRSTQSPPVSRHNAKSGRAASTRRTANADSDPTPPTETIDVVDGEEEVVVDL
TCESGAEAAVVDLTTNNDSVLLVDEGPQNWRPPVQSYLVSSDEDEDTPPVLSATLLPPTN
TSRSTPGTISCPVCLDGYSEIVGSGRLVVSTRCGHVFCSQCLRDSLTSSHTCPTCRKRLT
HRQYHPLYI
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atgagcagctctgttcagaggaagaggcggagcacacaaagtcccccggtttctagacac
aacgccaagagcgggagagctgcgagtaccaggaggacggcgaacgccgacagtgatccc
acccccccaacagagaccattgacgtggtggacggtgaggaggaggtggtcgtggatctc
acctgtgagagtggagcagaagctgctgtggtcgacctgactaccaacaatgactctgtg
ctgctggtggatgagggtcctcagaactggagaccacctgtacagagttatcttgttagc
agcgatgaagatgaagacacaccccccgtcctcagtgccaccctcctgccaccgacaaac
acctccaggtcaactccagggacaatcagctgtcctgtgtgtctggacggatactcagag
atcgttgggagcggccgattggtcgtgtccacccgttgtggtcacgtgttctgcagtcag
tgtttgagagactctctgacatcatcacacacctgtcccacctgcaggaagagacttact
caccgccagtaccaccccctgtacatctga
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integrated database retrieval system