Oreochromis niloticus (Nile tilapia): 100709054
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Entry
100709054 CDS
T06104
Name
(RefSeq) double-stranded RNA-specific editase 1 isoform X1
KO
K13194
double stranded RNA-specific editase B [EC:3.5.-.-]
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
onl03041
]
100709054
Spliceosome [BR:
onl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
100709054
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
A_deamin
dsrm
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
100709054
NCBI-ProteinID:
XP_003443286
Ensembl:
ENSONIG00000004464
LinkDB
All DBs
Position
LG16:3721808..3844114
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AA seq
747 aa
AA seq
DB search
MALLTNGAQSLGSYYCLIRRRFKRRRKKRSERKGAAGARLLSGQSKPVAMDVDEEENMSS
SSTDVKENRNLDNVSCKDGVGVAEQLPNGSGLGSRKRPLEEGNNGHTHSKFRAKKRKKTP
GPVLPKNALMQLNEIKPGLQYKLLSQTGPVHAPVFVMTVEVNGQMFEGMGPTKKKAKLNA
AEKALRSFVQFPNASEAHLAMGRTLTVNTDFTSDQADFPDMLFNGFETPAAPEESFYLGS
NGSSSLNSLGEYPLPTPPGSTLVQPPLPPPSAFSSPSSGKNPVMILNELRPGLKYDFVSE
SGESHAKNFVMSVTVDSQTFEGSGRNKKLAKARAAQAALSALFNMQLDQTPSRQPIPREG
LQLHLPQVLADAVSRLVVDKFSELTDNFTSPHARRKVLAGVVMTTGTDVKEAQVICVSTG
TKCINGEYMSDRGLALNDCHAEIIARRSLIRYLYTQLEFFLSNNKEDYHKSIFVLCDKGG
YRLKDNVQFHLYISTSPCGDARIFSPHEAGVEDQGDRHPNRKARGQLRTKIESGEGTIPV
RSSNTIQTWDGVLQGERLLTMSCSDKIARWNVVGIQGSLMSYFTEPIYFSSIILGSLYHA
DHLSRAMYQRIADIEDLPQQFTLNRPLLSGISNAEARQPGKAPNFSVNWTVGDQGLEVIN
ATTGKDDMGRASRLCKHALYSRWVRLHSKLSSILRIKVSKPSSYHEAKQAATEYHSAKQA
LIKAFHKAGLGAWVKKPIEQDQFTLSS
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atggcccttctcaccaacggcgcacagagtctgggctcctattactgcctgatccggcgc
aggttcaagaggaggcgcaagaaacgctccgaacgcaaaggtgcagcgggtgcgaggctg
ctctcgggtcagagcaaacccgtggccatggatgtggatgaggaagagaatatgagttca
agcagcaccgacgtaaaggaaaaccgaaacctggacaacgtgtcctgcaaagacggggtg
ggagtggctgaacagctccccaatggcagtggcctgggcagtcgaaagcgaccgctagaa
gagggaaacaatggccacacgcattccaagttccgggctaagaagcgcaagaaaacaccg
ggcccggtcctgcccaagaacgccctgatgcagctgaatgaaatcaaaccaggtctacag
tacaaactgctgtctcagacaggcccggtgcatgcgccagtgtttgtcatgaccgtggag
gtcaatggacagatgtttgaaggcatgggcccaacaaagaagaaggctaagctaaacgca
gctgagaaagcgctgcgttccttcgtccagttccccaatgcttcagaggcgcatctggcc
atgggccgaacgctgacagtgaacacagactttacatctgatcaagctgacttccccgac
atgctcttcaacggctttgagacgccagccgcgccggaagaatccttctatctgggctcc
aacggtagcagctccctaaattcactaggggagtatccactgcccacaccacctggcagt
acccttgtccagcccccattgccccctccatctgcattcagctcgccctccagtggcaaa
aacccagtcatgatcctcaatgagcttaggccgggtctcaaatatgactttgtctcagag
agcggtgagagtcacgccaagaattttgtgatgtcagtaacagtggattcacagacattt
gaaggatcagggcgcaacaagaagctggctaaagcccgggcagcgcaagccgccctgtct
gcactgttcaacatgcagctagaccagacaccatctcggcaacccataccaagagaggga
ttgcagcttcacctaccccaggttctggctgatgcggtctctcgcctggttgtggataag
ttcagtgagctgacagacaactttacgtccccgcatgcacggcgaaaagtcctagcaggc
gtcgtcatgacaacaggcacagatgtgaaggaagcacaggtcatttgtgtctccacggga
accaaatgcatcaacggtgagtacatgagtgaccgcggcctggcactcaatgactgccac
gctgagataattgcccgacgctcgctcatcaggtacctctacactcagctggagttcttc
ctcagcaacaacaaggaggactaccacaaatcaatatttgtgctgtgcgacaagggaggc
tacaggttaaaggataacgttcagttccacctctacatcagcacctctccctgtggagat
gccaggattttctctccacacgaggccggagtggaagaccaaggagacagacatcctaac
cggaaagcacggggtcagctgaggaccaaaatcgagtccggggagggcaccatccctgta
aggtccagcaacaccatccagacctgggacggtgttcttcaaggggagcgattactcacc
atgtcctgcagtgacaagattgcgaggtggaacgtggtgggcatccagggctccttgatg
agctacttcacagagccaatctacttctccagcatcatcctgggcagcctttaccatgct
gaccacctctccagggccatgtaccagcgcatcgcagatatcgaagacctgccccagcag
ttcaccctcaacaggcctcttctcagcggtataagtaatgctgaagccaggcagccaggc
aaggcaccaaacttcagtgtgaactggacggtgggtgaccagggcctggaggtgatcaac
gcaaccacgggcaaggacgacatgggccgcgcctcacggctctgcaaacacgcgctctac
agccgctgggtgcgccttcactccaagctgtcgtccattttgcggatcaaggtgtcgaag
cccagctcctaccacgaagcaaagcaggcggccacagagtaccactctgccaagcaggcg
ctcatcaaggctttccacaaggccggcttgggggcttgggtcaaaaagcccatcgagcaa
gaccagttcaccctcagctcctga
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