Oreochromis niloticus (Nile tilapia): 100709106
Help
Entry
100709106 CDS
T06104
Name
(RefSeq) LOW QUALITY PROTEIN: WD repeat-containing protein 20
KO
K24731
dystrophia myotonica WD repeat-containing protein
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
onl04990
]
100709106
Domain-containing proteins not elsewhere classified [BR:
onl04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
100709106
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
EIF3I
WDR90_beta-prop_4th
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_CAF1B_HIR1
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_EML
WDR55
PD40
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
100709106
NCBI-ProteinID:
XP_005461200
LinkDB
All DBs
Position
LG14:complement(35033522..35052149)
Genome browser
AA seq
578 aa
AA seq
DB search
MVKLQPEDPSEESERVCFNIGRELYFYTYTNIKKAVDLSKPIDKRIYKGTQPTCHDFNQY
SATAESVALIVGFSAGQVQYLDPIKKETSKLFNEERLIDKSKVTCLKWLPKSENLFLASH
ASGHLYLYNVDHPCGTTAPQYSLLRQGEGFAVYACKTKTPRNPLLRWAVGEGGLNEFAFS
PDGVHVACVGQDGCLRVFHFDSMELQGVMKSYFGGLLCVSWSPDGKYLATGGEDDLVTVW
SFAESRVVARGHGHKSWVNVVAFDPFTTSLEDEEPMELSGSEEDLHQGAQNNSMHFGRVR
TSSTLSRLSRHSSKGGGSPSVTYRFGSVGQDTQFCLWDLTDDVLYPRLPLSRAFTNTFGP
SLSNSGSGVVNSTSGGGGSGGVEGPSPPNTNTGASNPPTLPLPLPRSLSRSNSLPHPAVA
NASKGQGASEGSGGGGGGEGAAAEESTPFSIGRFATLSLQERKSDKSGSSGGVEKEHKRY
HSLGNISKSNDKINVAPRSNRLDAAKVLGTTLCPRMHEVPLLEPLVCKKIAHERLTVLVF
MDDCIITACQEGLICTWARPGKANLTAQNGNSPSGTVV
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagctgcagcccgaagacccgagcgaggagtcggagcgggtgtgcttcaacatc
ggcagggagctgtatttctacacgtacaccaacatcaagaaggctgtggacctcagtaag
cccatagacaagaggatctacaaggggactcagcccacatgtcacgacttcaaccagtac
tcggccacagcagagagtgtagctctcatcgtgggtttctcagctggtcaggtccagtat
ctcgaccccatcaagaaggaaaccagtaaactcttcaatgaggagaggttgatagacaaa
tccaaggtaacgtgtctaaaatggcttcccaagtcggagaacctgttcctggcctcccat
gccagcggtcacctctacctctacaacgtggaccacccatgcggcaccacggccccacag
tactctctgttgcggcagggcgaaggcttcgccgtttatgcctgcaaaaccaagacgccg
cgcaaccctctgctgcggtgggccgtgggggagggaggcctcaacgagtttgcgttctcc
ccagacggcgtgcacgtggcgtgcgtgggccaggacggatgcctgcgcgtcttccacttt
gattcaatggagcttcagggcgtgatgaagagctactttggtgggctgctctgcgtgtcg
tggagccccgatgggaaatatctcgccacgggaggggaggatgatctggttactgtgtgg
tcatttgcagaaagccgagtggtagcgagggggcacggccacaagtcttgggtcaatgtg
gtagcatttgatcccttcacgacttccctggaagatgaggagcctatggagctcagtggc
agcgaggaggacctccaccagggggcgcaaaataactccatgcactttgggcgggttcga
acgagcagcacgttatcgcgtctttctcggcacagctcaaaaggcggcggttcgccatcg
gtcacttaccgattcggctcggtggggcaggacacccagttctgtctgtgggacctgact
gatgacgtgctgtacccgcgcctgccgctatcccgcgcctttactaacacttttgggcct
tcgctgtccaactctggcagcggggtggtcaacagcacctcaggtgggggaggaagtgga
ggtgtggagggaccatcacccccgaacactaacaccggcgcctccaacccacccacgctc
cctttaccgcttcctcgctccctttcgcgctccaactctttgccccaccctgctgtggcg
aacgcctccaaaggccagggcgcctcagagggcagtgggggaggaggaggaggggaggga
gcagcggcggaggaaagcacccccttcagcatcggccgcttcgccacgctttccctacag
gagcgcaagtcggataagtccggcagcagtgggggcgtggagaaggagcacaagcggtac
cacagcctgggcaacatcagcaaaagcaacgacaagatcaacgtggcgccgaggagcaac
cggctggacgccgccaaggtgctgggcaccacgctgtgcccgcgcatgcacgaagtgccg
ctgctggagccgctggtctgtaagaagattgcacacgagaggctgacggtcctggtgttc
atggatgactgcatcatcacggcctgccaagagggcctcatctgtacctgggcacggccg
gggaaggcgaacctgacagcacagaacgggaactctccgagcggcacggtggtatag
DBGET
integrated database retrieval system
