Oreochromis niloticus (Nile tilapia): 100709149
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Entry
100709149 CDS
T06104
Name
(RefSeq) volume-regulated anion channel subunit LRRC8D
KO
K22038
volume-regulated anion channel
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
onl04040
]
100709149
Ion channels [BR:
onl04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
100709149
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Gene cluster
GFIT
Motif
Pfam:
Pannexin_like
LRR_8
LRR_14
LRR_4
LRR_1
LRR_R13L1-DRL21
LRR_9
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
100709149
NCBI-ProteinID:
XP_003443213
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Position
LG4:8099224..8104244
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AA seq
892 aa
AA seq
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MFSLSELAPLNQHQNRSKLLKPWWEVFMDYLVVLMLMTSVLACTEQLSRDRVVCIPLDST
TNTTDHSHSKSANVGLSPSSQPQIHHAHKIGPNLHSAPRGRRTHLVYQQYIYISQVCYHE
ALPLYSRFFPYMALLQSLILVASGSFWLHFPHTSSRIEQFLAILAKCCESPWTSQALSHA
AHQESIQEMVEEGRRAHQPHHRTSTSPTVTHTRHSSIDSGTDSPLLKRMDSACATPPSPC
PSTLSCNSTVSCVSLDSREQLPSSSPSVMADSHSQVISLDKSDGEQARALFERVRKFRSH
CESSAVICKVYLAQTVFKLLIVTLIMSYTVPLLGSLSFNHTCHPEERALVGYATFECIHV
LSSLLRKLLVAYLTLLGLYGLLNFYTLTWILSSSLQQYSFHSLKELSSLRDVPDLKNDLA
FLIHMLDQYDPLLVHRLFVFLSPVSESRLLEESLERRWGEEKLHAMISVDADGRSRLQLV
ALPRLPPALFTLSQLQVLKLELIADTRFTAHMTSMTSLRELHLYHCKATVDPSALAFLQE
RLEVLQLTFTQASEIPSWVLSLRGLHELHLSGRLGSDGGVSRSWALGSLRQLRHLRVLVI
RGMLQRIPGELCEVAGSLVRLEIQNEGTRLLVLTGLKRMVYLTELHLQDCQLERLPSALL
ALTILRVLDLQHNNLRTLEELLSLAHLRRLSCLRLAYNRVLVLPASVGVLRGLELLDLSN
NQLQSLPPALFTLRRLRRLLLAGNLLEELPAEVKALQLLTELDLSGNRLERVPPELFNCC
LELRTLNMSHNSLSFLPREIAALSQLCRLDLRSNNLEELPAELGSCSGLHGGGLLVENWL
FLSLPPHVRDFLSRSYTPGGAHTEEHSRPESDSFPYFSPTQWSFSSALESQI
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atgttttccctgtcagagctagcgcctctgaatcagcatcagaacaggtctaaactgctg
aagccctggtgggaggtctttatggactacctggtggtcctgatgttgatgacatctgtc
ctggcttgtacggagcagctgtccagggaccgagtagtgtgcattcctttggattcaact
acaaacactactgatcacagtcactcaaaaagtgccaatgtgggactgtctccatcgtca
cagcctcaaatacaccacgcacacaaaatcggcccaaatcttcactctgcacctcggggt
cggcgtacgcatttggtgtaccagcagtacatttatattagccaggtgtgctaccatgaa
gctctgcctttgtactcccgcttcttcccttacatggccttgcttcaatctctcatcctg
gtagccagtggctccttctggctccactttccccacacctcttcccgcatagagcagttc
ctagccatcttggcaaagtgctgtgagtcaccttggacatctcaggccctgtctcatgcc
gcccaccaagagagcatccaggagatggtggaggagggaagacgagcacaccaaccacac
caccgaacttccacttcccccacagtgacccacacaagacactcgagcatagactcaggc
acagacagcccacttttaaagaggatggacagcgcatgtgccacgcctccgtccccttgt
ccctccacactgtcctgtaactccaccgtgtcttgtgtatctcttgactcccgggagcaa
cttccttcttccagcccatcagtaatggctgacagccacagccaggtaatcagtctggat
aaaagtgatggggaacaggcgagggcgctgtttgaaagggtccggaagtttaggtcccac
tgtgaaagctcagctgtcatttgtaaggtctacttggctcagacagttttcaaactcctg
attgtaacactgattatgagttacacagtccctcttctcggctccctgtccttcaaccac
acctgccaccctgaggagcgggccctggtgggctacgccaccttcgagtgtatccacgtg
ctctcgtcacttctccgcaaactgctggtggcctacctgaccttactgggcctgtatggt
ctgcttaatttttacaccctcacctggattttaagcagctctctgcagcagtattccttc
cattcactgaaggagctgagctccctgagagatgttcctgacctgaagaacgacctggcc
tttcttatacacatgttagaccagtacgaccctctgctggtccaccgtctctttgtgttt
ttgtcccctgtcagtgagagcaggctgctggaggaaagcttagagaggcgctggggggag
gagaagctgcacgccatgatcagcgtggatgcagacggccgctccaggctgcagctggtg
gccctgcctcgccttcctccagccctcttcaccctcagccagcttcaggtcctcaaactg
gagctcatcgcagacaccaggtttactgcacacatgaccagcatgacctcactcagggag
ctgcacctctaccactgcaaagcaactgtggatcccagcgcgcttgcctttctccaggaa
cgtctagaagtccttcagcttaccttcactcaggcatcagagatccccagctgggtcctc
tccttgcgaggccttcatgagcttcacctctctggtcgcttaggcagtgacggtggggtg
agccgtagctgggcactggggagcctacgccagttgcgtcacctacgtgtcttggtgatt
cgaggcatgttgcagcggatccctggggagctctgcgaggtggcaggcagcttggtgaga
ctggagatccagaatgagggcacgaggctgctggtgctgacgggcctgaagcggatggtt
tacctgacagagctgcatctgcaggattgccagctggagcgtttaccctctgctctgtta
gcactgaccatcctgcgggtgcttgacctgcagcacaataacctaagaactctggaggag
ctgctcagtctggctcaccttcgtcgtctctcttgtcttagacttgcttacaaccgtgtt
ttggtactgccggccagcgtcggtgtgcttagaggcctcgagctcttggatctgtctaac
aaccagctccagagccttcctccagcgctcttcactcttcgacgccttcggaggctcctg
cttgccggtaacctgctggaggagctgcctgctgaggtgaaggcgctgcagctgctcaca
gagttggacctcagtgggaacaggttggagagggtaccccctgagcttttcaattgctgt
ttggagttgcgcaccctgaatatgtctcacaactctcttagcttcttacccagagagatt
gcagctctaagtcagctgtgcaggttggacttgcgcagcaacaatctagaagaactgcct
gctgaactgggctcctgctcagggctgcatggaggtggtctcctggtggaaaactggctc
tttctttctttgccaccacatgtcagagacttcctgagccgatcttacaccccaggtggt
gcgcacacagaggagcattcccggcccgagtctgacagttttccatacttctctcctaca
cagtggagcttctcttctgctctggaatcacagatatga
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